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Lag0022220 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0022220
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionSingle-stranded DNA-binding protein, mitochondrial
Genome locationchr7:21411681..21413569
RNA-Seq ExpressionLag0022220
SyntenyLag0022220
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046058.1 gag protease polyprotein [Cucumis melo var. makuwa]5.4e-1358.62Show/hide
Query:  MLGKSIFGTTSKSLRNFMSQTAFFAASQATTYLASIVESAMHPYLMLHHTIAPSLRVNTDSDVNFLESLSNSKSEWCRSSKRSTSQP
        M+ K +FGTT  S  NF+SQTA FAASQA TY + IV+SAMHP LML HT A   RVNTD DV+ LESLS  KSE   S   + + P
Subjt:  MLGKSIFGTTSKSLRNFMSQTAFFAASQATTYLASIVESAMHPYLMLHHTIAPSLRVNTDSDVNFLESLSNSKSEWCRSSKRSTSQP

KAA0054514.1 hypothetical protein E6C27_scaffold24G002950 [Cucumis melo var. makuwa]9.2e-1377.05Show/hide
Query:  RNFMSQTAFFAASQATTYLASIVESAMHPYLMLHHTIAPSLRVNTDSDVNFLESLSNSKSE
        RNF+SQTA FAASQA TY ASIVESAMHP L+L HT AP  RVNTD DV+FLESLS  KSE
Subjt:  RNFMSQTAFFAASQATTYLASIVESAMHPYLMLHHTIAPSLRVNTDSDVNFLESLSNSKSE

KAA0065883.1 hypothetical protein E6C27_scaffold538G00570 [Cucumis melo var. makuwa]3.0e-1164.29Show/hide
Query:  IFGTTSKSLRNFMSQTAFFAASQATTYLASIVESAMHPYLMLHHTIAPSLRVNTDSDVNFLESLSNSKSE
        +FGTTSKS +NF SQ A+F ASQ  TYLASI+E AMH  LMLH+      RVNTD DV+FLESLS  KS+
Subjt:  IFGTTSKSLRNFMSQTAFFAASQATTYLASIVESAMHPYLMLHHTIAPSLRVNTDSDVNFLESLSNSKSE

KAA0067074.1 hypothetical protein E6C27_scaffold38G001260 [Cucumis melo var. makuwa]1.1e-1368.12Show/hide
Query:  MLGKSIFGTTSKSLRNFMSQTAFFAASQATTYLASIVESAMHPYLMLHHTIAPSLRVNTDSDVNFLESL
        ++ K +FGTTSKS RNF++QT  F ASQA TY  SIVESAMH  LMLHHT A   RVNTD DV+FLESL
Subjt:  MLGKSIFGTTSKSLRNFMSQTAFFAASQATTYLASIVESAMHPYLMLHHTIAPSLRVNTDSDVNFLESL

RUS92128.1 hypothetical protein EGW08_000152 [Elysia chlorotica]5.1e-1138.6Show/hide
Query:  TSQPTDQEDQQVSRPIIQEINKPTD-RSRRSTSQQADHPRDQQANRPIKKINKSTDRSSKKIDKATDR-TDHQANRPIQEIIKSSSQQADPRDQQVSRPI
        T++PT   DQ+ +RP  Q+ N+PTD ++ R T QQ + P DQQ NRP               D+ T+R  D Q NRP      +  Q + P DQQ +RP 
Subjt:  TSQPTDQEDQQVSRPIIQEINKPTD-RSRRSTSQQADHPRDQQANRPIKKINKSTDRSSKKIDKATDR-TDHQANRPIQEIIKSSSQQADPRDQQVSRPI

Query:  IQEINKPTD-RSRRSTSQQADHPRDQQANRPI-KKINKSTDRSSKKINKPTDR-----TDHQANRPIQEII
         Q+ N+PTD ++ R T QQ   P DQQ NRP  ++ N+  D+ +   N+PTD+     TD Q NRP   ++
Subjt:  IQEINKPTD-RSRRSTSQQADHPRDQQANRPI-KKINKSTDRSSKKINKPTDR-----TDHQANRPIQEII

TrEMBL top hitse value%identityAlignment
A0A433UEB9 Uncharacterized protein2.5e-1138.6Show/hide
Query:  TSQPTDQEDQQVSRPIIQEINKPTD-RSRRSTSQQADHPRDQQANRPIKKINKSTDRSSKKIDKATDR-TDHQANRPIQEIIKSSSQQADPRDQQVSRPI
        T++PT   DQ+ +RP  Q+ N+PTD ++ R T QQ + P DQQ NRP               D+ T+R  D Q NRP      +  Q + P DQQ +RP 
Subjt:  TSQPTDQEDQQVSRPIIQEINKPTD-RSRRSTSQQADHPRDQQANRPIKKINKSTDRSSKKIDKATDR-TDHQANRPIQEIIKSSSQQADPRDQQVSRPI

Query:  IQEINKPTD-RSRRSTSQQADHPRDQQANRPI-KKINKSTDRSSKKINKPTDR-----TDHQANRPIQEII
         Q+ N+PTD ++ R T QQ   P DQQ NRP  ++ N+  D+ +   N+PTD+     TD Q NRP   ++
Subjt:  IQEINKPTD-RSRRSTSQQADHPRDQQANRPI-KKINKSTDRSSKKINKPTDR-----TDHQANRPIQEII

A0A5A7TT61 Gag protease polyprotein2.6e-1358.62Show/hide
Query:  MLGKSIFGTTSKSLRNFMSQTAFFAASQATTYLASIVESAMHPYLMLHHTIAPSLRVNTDSDVNFLESLSNSKSEWCRSSKRSTSQP
        M+ K +FGTT  S  NF+SQTA FAASQA TY + IV+SAMHP LML HT A   RVNTD DV+ LESLS  KSE   S   + + P
Subjt:  MLGKSIFGTTSKSLRNFMSQTAFFAASQATTYLASIVESAMHPYLMLHHTIAPSLRVNTDSDVNFLESLSNSKSEWCRSSKRSTSQP

A0A5A7VCJ9 Uncharacterized protein1.4e-1164.29Show/hide
Query:  IFGTTSKSLRNFMSQTAFFAASQATTYLASIVESAMHPYLMLHHTIAPSLRVNTDSDVNFLESLSNSKSE
        +FGTTSKS +NF SQ A+F ASQ  TYLASI+E AMH  LMLH+      RVNTD DV+FLESLS  KS+
Subjt:  IFGTTSKSLRNFMSQTAFFAASQATTYLASIVESAMHPYLMLHHTIAPSLRVNTDSDVNFLESLSNSKSE

A0A5D3BHZ1 Uncharacterized protein4.5e-1377.05Show/hide
Query:  RNFMSQTAFFAASQATTYLASIVESAMHPYLMLHHTIAPSLRVNTDSDVNFLESLSNSKSE
        RNF+SQTA FAASQA TY ASIVESAMHP L+L HT AP  RVNTD DV+FLESLS  KSE
Subjt:  RNFMSQTAFFAASQATTYLASIVESAMHPYLMLHHTIAPSLRVNTDSDVNFLESLSNSKSE

A0A5D3DRM1 Uncharacterized protein5.3e-1468.12Show/hide
Query:  MLGKSIFGTTSKSLRNFMSQTAFFAASQATTYLASIVESAMHPYLMLHHTIAPSLRVNTDSDVNFLESL
        ++ K +FGTTSKS RNF++QT  F ASQA TY  SIVESAMH  LMLHHT A   RVNTD DV+FLESL
Subjt:  MLGKSIFGTTSKSLRNFMSQTAFFAASQATTYLASIVESAMHPYLMLHHTIAPSLRVNTDSDVNFLESL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGGGGAAGTCCATATTTGGAACGACTTCCAAATCACTTAGGAACTTCATGAGCCAAACTGCTTTCTTTGCTGCTTCACAAGCAACAACATATTTAGCCTCCATAGT
GGAGTCTGCAATGCATCCTTACTTGATGCTTCACCATACTATAGCTCCCTCGTTAAGGGTGAACACTGACTCTGACGTGAATTTCCTAGAATCCTTGTCAAACTCGAAGT
CAGAGTGGTGCCGATCATCCAAGAGATCAACAAGCCAACCGACCGATCAAGAAGATCAACAAGTCAGCAGGCCGATCATCCAAGAGATCAACAAGCCAACTGACCGATCA
AGAAGATCAACAAGTCAGCAGGCCGATCATCCAAGAGATCAACAAGCCAACCGACCGATCAAGAAGATCAACAAGTCAACAGACCGATCATCCAAGAAGATCGACAAGGC
AACCGATCGAACAGATCATCAAGCCAACAGGCCGATCCAAGAGATCATCAAATCATCAAGCCAACAGGCCGATCCAAGAGATCAACAAGTCAGCAGGCCGATCATCCAAG
AGATCAACAAGCCAACTGACCGATCAAGAAGATCAACAAGTCAGCAGGCCGATCATCCAAGAGATCAACAAGCCAACCGACCGATCAAGAAGATCAATAAGTCAACAGAC
CGATCATCCAAGAAGATCAACAAGCCAACCGATCGAACAGATCATCAAGCCAACAGGCCGATCCAAGAGATCATCAAGTCAGCAGGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTGGGGAAGTCCATATTTGGAACGACTTCCAAATCACTTAGGAACTTCATGAGCCAAACTGCTTTCTTTGCTGCTTCACAAGCAACAACATATTTAGCCTCCATAGT
GGAGTCTGCAATGCATCCTTACTTGATGCTTCACCATACTATAGCTCCCTCGTTAAGGGTGAACACTGACTCTGACGTGAATTTCCTAGAATCCTTGTCAAACTCGAAGT
CAGAGTGGTGCCGATCATCCAAGAGATCAACAAGCCAACCGACCGATCAAGAAGATCAACAAGTCAGCAGGCCGATCATCCAAGAGATCAACAAGCCAACTGACCGATCA
AGAAGATCAACAAGTCAGCAGGCCGATCATCCAAGAGATCAACAAGCCAACCGACCGATCAAGAAGATCAACAAGTCAACAGACCGATCATCCAAGAAGATCGACAAGGC
AACCGATCGAACAGATCATCAAGCCAACAGGCCGATCCAAGAGATCATCAAATCATCAAGCCAACAGGCCGATCCAAGAGATCAACAAGTCAGCAGGCCGATCATCCAAG
AGATCAACAAGCCAACTGACCGATCAAGAAGATCAACAAGTCAGCAGGCCGATCATCCAAGAGATCAACAAGCCAACCGACCGATCAAGAAGATCAATAAGTCAACAGAC
CGATCATCCAAGAAGATCAACAAGCCAACCGATCGAACAGATCATCAAGCCAACAGGCCGATCCAAGAGATCATCAAGTCAGCAGGCTGA
Protein sequenceShow/hide protein sequence
MLGKSIFGTTSKSLRNFMSQTAFFAASQATTYLASIVESAMHPYLMLHHTIAPSLRVNTDSDVNFLESLSNSKSEWCRSSKRSTSQPTDQEDQQVSRPIIQEINKPTDRS
RRSTSQQADHPRDQQANRPIKKINKSTDRSSKKIDKATDRTDHQANRPIQEIIKSSSQQADPRDQQVSRPIIQEINKPTDRSRRSTSQQADHPRDQQANRPIKKINKSTD
RSSKKINKPTDRTDHQANRPIQEIIKSAG