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Lag0022225 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0022225
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionPMD domain-containing protein
Genome locationchr7:21513970..21517027
RNA-Seq ExpressionLag0022225
SyntenyLag0022225
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036933.1 uncharacterized protein E6C27_scaffold86G00060 [Cucumis melo var. makuwa]4.1e-2648.09Show/hide
Query:  AYKCFTFGSIDMTPTIEEYQSVLHMSAQTKVEAYSYDKELTMKRALSTLLGKIRTSDIEKQVKIKGENTCLPLDYILTLQQKYANEDKELTLLVLCIFNV
        AY CFTFGS D+ PTIEEYQ++L M  + +   Y ++ + T KR LS  L  +  ++I+K +K KG    +P DY++ + Q Y +EDK LTLL LCI+  
Subjt:  AYKCFTFGSIDMTPTIEEYQSVLHMSAQTKVEAYSYDKELTMKRALSTLLGKIRTSDIEKQVKIKGENTCLPLDYILTLQQKYANEDKELTLLVLCIFNV

Query:  VLFPKVCGYVEECVVKLFAKIERGVDPIIHV
        V+FPK  GYV+  V+KLF ++ERGV+PII +
Subjt:  VLFPKVCGYVEECVVKLFAKIERGVDPIIHV

KAA0036949.1 girdin-like [Cucumis melo var. makuwa]4.1e-2648.09Show/hide
Query:  AYKCFTFGSIDMTPTIEEYQSVLHMSAQTKVEAYSYDKELTMKRALSTLLGKIRTSDIEKQVKIKGENTCLPLDYILTLQQKYANEDKELTLLVLCIFNV
        AY CFTFGS D+ PTIEEYQ++L M  + +   Y ++ + T KR LS  L  +  ++I+K +K KG    +P DY++ + Q Y +EDK LTLL LCI+  
Subjt:  AYKCFTFGSIDMTPTIEEYQSVLHMSAQTKVEAYSYDKELTMKRALSTLLGKIRTSDIEKQVKIKGENTCLPLDYILTLQQKYANEDKELTLLVLCIFNV

Query:  VLFPKVCGYVEECVVKLFAKIERGVDPIIHV
        V+FPK  GYV+  V+KLF ++ERGV+PII +
Subjt:  VLFPKVCGYVEECVVKLFAKIERGVDPIIHV

KAA0060423.1 uncharacterized protein E6C27_scaffold22G002420 [Cucumis melo var. makuwa]2.9e-2743.56Show/hide
Query:  AYKCFTFGSIDMTPTIEEYQSVLHMSAQTKVEAYSYDKELTMKRALSTLLGKIRTSDIEKQVKIKGENTCLPLDYILTLQQKYANEDKELTLLVLCIFNV
        AY CFTFGS D+ PTIEEYQ++L M  + +   Y ++ + T KR LS  L  +  ++I+K +KIKG    +P DY++ + Q Y +EDK LTLL LCI+  
Subjt:  AYKCFTFGSIDMTPTIEEYQSVLHMSAQTKVEAYSYDKELTMKRALSTLLGKIRTSDIEKQVKIKGENTCLPLDYILTLQQKYANEDKELTLLVLCIFNV

Query:  VLFPKVCGYVEECVVKLFAKIERGVDPIIHVEVVGNGVPMQRKNYCEYYHYGYTGMTLRLLEV
        V+FPK  GYV+  V+KLF ++ERGV+PII +         +  NYC     G     L LL +
Subjt:  VLFPKVCGYVEECVVKLFAKIERGVDPIIHVEVVGNGVPMQRKNYCEYYHYGYTGMTLRLLEV

XP_022147190.1 uncharacterized protein LOC111016201 [Momordica charantia]2.6e-3659.23Show/hide
Query:  YKCFTFGSIDMTPTIEEYQSVLHMSAQTKVEAYSYDKELTMKRALSTLLGKIRTSDIEKQVKIKGENTCLPLDYILTLQQKYANEDKELTLLVLCIFNVV
        Y+CFTF S+D+TPTIEEY ++L +  Q K+E YSYD   T+KRA+S L+GKI   +IEK VK KGENTCLP++YI +LQ ++ NE++EL+LL LC+FN+V
Subjt:  YKCFTFGSIDMTPTIEEYQSVLHMSAQTKVEAYSYDKELTMKRALSTLLGKIRTSDIEKQVKIKGENTCLPLDYILTLQQKYANEDKELTLLVLCIFNVV

Query:  LFPKVCGYVEECVVKLFAKIERGVDPIIHV
        LFP V  YVEE VVKLF K+E GV+ +I +
Subjt:  LFPKVCGYVEECVVKLFAKIERGVDPIIHV

XP_022150759.1 uncharacterized protein LOC111018820 [Momordica charantia]2.3e-3258.2Show/hide
Query:  IDMTPTIEEYQSVLHMSAQTKVEAYSYDKELTMKRALSTLLGKIRTSDIEKQVKIKGENTCLPLDYILTLQQKYANEDKELTLLVLCIFNVVLFPKVCGY
        +++TPTI+EY ++L +  Q K+E YSYD   T+KRA+S L+GKI   +IEK VK KGENTCLP++YIL+LQQ++ NE++EL+LL LC+FN+VLFPKV GY
Subjt:  IDMTPTIEEYQSVLHMSAQTKVEAYSYDKELTMKRALSTLLGKIRTSDIEKQVKIKGENTCLPLDYILTLQQKYANEDKELTLLVLCIFNVVLFPKVCGY

Query:  VEECVVKLFAKIERGVDPIIHV
        VEE +VKLF K+E  V+ +I +
Subjt:  VEECVVKLFAKIERGVDPIIHV

TrEMBL top hitse value%identityAlignment
A0A5A7T1W2 Retrotrans_gag domain-containing protein2.0e-2648.09Show/hide
Query:  AYKCFTFGSIDMTPTIEEYQSVLHMSAQTKVEAYSYDKELTMKRALSTLLGKIRTSDIEKQVKIKGENTCLPLDYILTLQQKYANEDKELTLLVLCIFNV
        AY CFTFGS D+ PTIEEYQ++L M  + +   Y ++ + T KR LS  L  +  ++I+K +K KG    +P DY++ + Q Y +EDK LTLL LCI+  
Subjt:  AYKCFTFGSIDMTPTIEEYQSVLHMSAQTKVEAYSYDKELTMKRALSTLLGKIRTSDIEKQVKIKGENTCLPLDYILTLQQKYANEDKELTLLVLCIFNV

Query:  VLFPKVCGYVEECVVKLFAKIERGVDPIIHV
        V+FPK  GYV+  V+KLF ++ERGV+PII +
Subjt:  VLFPKVCGYVEECVVKLFAKIERGVDPIIHV

A0A5A7T6E2 Girdin-like2.0e-2648.09Show/hide
Query:  AYKCFTFGSIDMTPTIEEYQSVLHMSAQTKVEAYSYDKELTMKRALSTLLGKIRTSDIEKQVKIKGENTCLPLDYILTLQQKYANEDKELTLLVLCIFNV
        AY CFTFGS D+ PTIEEYQ++L M  + +   Y ++ + T KR LS  L  +  ++I+K +K KG    +P DY++ + Q Y +EDK LTLL LCI+  
Subjt:  AYKCFTFGSIDMTPTIEEYQSVLHMSAQTKVEAYSYDKELTMKRALSTLLGKIRTSDIEKQVKIKGENTCLPLDYILTLQQKYANEDKELTLLVLCIFNV

Query:  VLFPKVCGYVEECVVKLFAKIERGVDPIIHV
        V+FPK  GYV+  V+KLF ++ERGV+PII +
Subjt:  VLFPKVCGYVEECVVKLFAKIERGVDPIIHV

A0A5A7UWQ6 Uncharacterized protein1.4e-2743.56Show/hide
Query:  AYKCFTFGSIDMTPTIEEYQSVLHMSAQTKVEAYSYDKELTMKRALSTLLGKIRTSDIEKQVKIKGENTCLPLDYILTLQQKYANEDKELTLLVLCIFNV
        AY CFTFGS D+ PTIEEYQ++L M  + +   Y ++ + T KR LS  L  +  ++I+K +KIKG    +P DY++ + Q Y +EDK LTLL LCI+  
Subjt:  AYKCFTFGSIDMTPTIEEYQSVLHMSAQTKVEAYSYDKELTMKRALSTLLGKIRTSDIEKQVKIKGENTCLPLDYILTLQQKYANEDKELTLLVLCIFNV

Query:  VLFPKVCGYVEECVVKLFAKIERGVDPIIHVEVVGNGVPMQRKNYCEYYHYGYTGMTLRLLEV
        V+FPK  GYV+  V+KLF ++ERGV+PII +         +  NYC     G     L LL +
Subjt:  VLFPKVCGYVEECVVKLFAKIERGVDPIIHVEVVGNGVPMQRKNYCEYYHYGYTGMTLRLLEV

A0A6J1CZG4 uncharacterized protein LOC1110162011.3e-3659.23Show/hide
Query:  YKCFTFGSIDMTPTIEEYQSVLHMSAQTKVEAYSYDKELTMKRALSTLLGKIRTSDIEKQVKIKGENTCLPLDYILTLQQKYANEDKELTLLVLCIFNVV
        Y+CFTF S+D+TPTIEEY ++L +  Q K+E YSYD   T+KRA+S L+GKI   +IEK VK KGENTCLP++YI +LQ ++ NE++EL+LL LC+FN+V
Subjt:  YKCFTFGSIDMTPTIEEYQSVLHMSAQTKVEAYSYDKELTMKRALSTLLGKIRTSDIEKQVKIKGENTCLPLDYILTLQQKYANEDKELTLLVLCIFNVV

Query:  LFPKVCGYVEECVVKLFAKIERGVDPIIHV
        LFP V  YVEE VVKLF K+E GV+ +I +
Subjt:  LFPKVCGYVEECVVKLFAKIERGVDPIIHV

A0A6J1DB13 uncharacterized protein LOC1110188201.1e-3258.2Show/hide
Query:  IDMTPTIEEYQSVLHMSAQTKVEAYSYDKELTMKRALSTLLGKIRTSDIEKQVKIKGENTCLPLDYILTLQQKYANEDKELTLLVLCIFNVVLFPKVCGY
        +++TPTI+EY ++L +  Q K+E YSYD   T+KRA+S L+GKI   +IEK VK KGENTCLP++YIL+LQQ++ NE++EL+LL LC+FN+VLFPKV GY
Subjt:  IDMTPTIEEYQSVLHMSAQTKVEAYSYDKELTMKRALSTLLGKIRTSDIEKQVKIKGENTCLPLDYILTLQQKYANEDKELTLLVLCIFNVVLFPKVCGY

Query:  VEECVVKLFAKIERGVDPIIHV
        VEE +VKLF K+E  V+ +I +
Subjt:  VEECVVKLFAKIERGVDPIIHV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAATTCTCCACTCAAGCCTACTACATCGTTAAACCGGTGGCCTACAAATGTTTCACATTTGGCTCAATCGACATGACTCCTACAATAGAGGAATATCAATCAGTTCT
GCATATGTCAGCACAAACAAAGGTTGAAGCTTATTCCTACGATAAAGAGCTTACAATGAAAAGAGCATTGTCTACTCTTCTGGGCAAGATTCGTACAAGCGACATTGAGA
AACAAGTAAAGATAAAAGGAGAGAACACATGCCTACCCCTGGACTACATCCTTACTCTTCAACAAAAATATGCAAATGAAGATAAGGAATTAACTTTACTGGTGTTGTGT
ATCTTTAATGTTGTTTTGTTTCCTAAAGTGTGTGGATATGTTGAGGAATGCGTGGTCAAATTGTTTGCGAAGATAGAAAGAGGAGTTGATCCCATTATTCATGTTGAGGT
TGTAGGGAACGGGGTCCCGATGCAGCGGAAGAACTATTGTGAATACTACCACTATGGCTACACCGGTATGACTTTGAGACTTCTAGAGGTAAGAGACTGGTGGGAGCCTT
CAGGGGAATTCTTTGAGAAGGAGGCCACCATTCATTCAGATTGGGGGATTCAGATTCGGGGATTCAGCCAGAGGCAGAGAGGGCAGAGTCCAGAGCATTCTTCCAAGATC
CATAGTCGTCGGAATCCAAAGAGTCCAGAGAATTCAGAGATCCGAGATTCAAAATTCAAAGGATTCAAGACTCAGAAGATTGGAAGACTAGAAGACTCTAAAAGAGATCA
ACAAACCAACCGACCGATCAAGAAGATCAACAAGCTGATCCAAGAGATCAACAAGCCAACCGACCGATCAAGAAGATCAACAAGTCAGCAGGCCGATCATCCAAGAGATC
AACAAGCCAACCGACCGATCAAGAAGATCAACAAGTCAGCAGGCCGATCATCCAAGAAGATCAACAAGTTAACCGATCGAACAGATCATCAAGCCAACAGGCCGATCCAA
GAGATCATCAAGTCAGCAGGTCGATCATCCAAGAGGATCAACAAGCTAACAAGCCGATCCAAGAGATCATCAAGCCAACAGACCGATCCAACAGATCATCAAGTCAGCAG
GCCGATCATCCAAGAGGATCAACAAGCTAACAAGCCGATCCAAGAGATCATCAACCTAGCAGGCCGATCATCCAAGAAACTCAACAAACGAGCCCAAGAAGATCAACAAG
CTAGAGACCAAAGTTTATATATTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAATTCTCCACTCAAGCCTACTACATCGTTAAACCGGTGGCCTACAAATGTTTCACATTTGGCTCAATCGACATGACTCCTACAATAGAGGAATATCAATCAGTTCT
GCATATGTCAGCACAAACAAAGGTTGAAGCTTATTCCTACGATAAAGAGCTTACAATGAAAAGAGCATTGTCTACTCTTCTGGGCAAGATTCGTACAAGCGACATTGAGA
AACAAGTAAAGATAAAAGGAGAGAACACATGCCTACCCCTGGACTACATCCTTACTCTTCAACAAAAATATGCAAATGAAGATAAGGAATTAACTTTACTGGTGTTGTGT
ATCTTTAATGTTGTTTTGTTTCCTAAAGTGTGTGGATATGTTGAGGAATGCGTGGTCAAATTGTTTGCGAAGATAGAAAGAGGAGTTGATCCCATTATTCATGTTGAGGT
TGTAGGGAACGGGGTCCCGATGCAGCGGAAGAACTATTGTGAATACTACCACTATGGCTACACCGGTATGACTTTGAGACTTCTAGAGGTAAGAGACTGGTGGGAGCCTT
CAGGGGAATTCTTTGAGAAGGAGGCCACCATTCATTCAGATTGGGGGATTCAGATTCGGGGATTCAGCCAGAGGCAGAGAGGGCAGAGTCCAGAGCATTCTTCCAAGATC
CATAGTCGTCGGAATCCAAAGAGTCCAGAGAATTCAGAGATCCGAGATTCAAAATTCAAAGGATTCAAGACTCAGAAGATTGGAAGACTAGAAGACTCTAAAAGAGATCA
ACAAACCAACCGACCGATCAAGAAGATCAACAAGCTGATCCAAGAGATCAACAAGCCAACCGACCGATCAAGAAGATCAACAAGTCAGCAGGCCGATCATCCAAGAGATC
AACAAGCCAACCGACCGATCAAGAAGATCAACAAGTCAGCAGGCCGATCATCCAAGAAGATCAACAAGTTAACCGATCGAACAGATCATCAAGCCAACAGGCCGATCCAA
GAGATCATCAAGTCAGCAGGTCGATCATCCAAGAGGATCAACAAGCTAACAAGCCGATCCAAGAGATCATCAAGCCAACAGACCGATCCAACAGATCATCAAGTCAGCAG
GCCGATCATCCAAGAGGATCAACAAGCTAACAAGCCGATCCAAGAGATCATCAACCTAGCAGGCCGATCATCCAAGAAACTCAACAAACGAGCCCAAGAAGATCAACAAG
CTAGAGACCAAAGTTTATATATTTAA
Protein sequenceShow/hide protein sequence
MKFSTQAYYIVKPVAYKCFTFGSIDMTPTIEEYQSVLHMSAQTKVEAYSYDKELTMKRALSTLLGKIRTSDIEKQVKIKGENTCLPLDYILTLQQKYANEDKELTLLVLC
IFNVVLFPKVCGYVEECVVKLFAKIERGVDPIIHVEVVGNGVPMQRKNYCEYYHYGYTGMTLRLLEVRDWWEPSGEFFEKEATIHSDWGIQIRGFSQRQRGQSPEHSSKI
HSRRNPKSPENSEIRDSKFKGFKTQKIGRLEDSKRDQQTNRPIKKINKLIQEINKPTDRSRRSTSQQADHPRDQQANRPIKKINKSAGRSSKKINKLTDRTDHQANRPIQ
EIIKSAGRSSKRINKLTSRSKRSSSQQTDPTDHQVSRPIIQEDQQANKPIQEIINLAGRSSKKLNKRAQEDQQARDQSLYI