; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0022226 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0022226
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrotransposon gag protein
Genome locationchr7:21518788..21519324
RNA-Seq ExpressionLag0022226
SyntenyLag0022226
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044978.1 retrotransposon gag protein [Cucumis melo var. makuwa]1.0e-4266.23Show/hide
Query:  EEVDNSKKSEQRTSVFDRIKPPTTRPSVFQRMSMAATEEENQCSVSAFVRPSAFQRLSVSTSKKSRPSTSVFYRLKVTSDQPKRKMDNLEVKLFDEVNRD
        EEVDNS + +QRTSVFDRIKP TTR SVFQR+SMA  EEENQC  S + R SAF+RLS+STSKK RPSTS F RLK+T+DQ +R+M +L+ K F E N D
Subjt:  EEVDNSKKSEQRTSVFDRIKPPTTRPSVFQRMSMAATEEENQCSVSAFVRPSAFQRLSVSTSKKSRPSTSVFYRLKVTSDQPKRKMDNLEVKLFDEVNRD

Query:  KKLHSSVPSRMKRKFSVLITTEGSLKVKPNLIVLTNPINEGSDQDHDKDKS
         K+HS VPSRMKRK SV I TEGSL VKP  I+ TNPINEG ++  D++KS
Subjt:  KKLHSSVPSRMKRKFSVLITTEGSLKVKPNLIVLTNPINEGSDQDHDKDKS

KAA0055462.1 retrotransposon gag protein [Cucumis melo var. makuwa]5.2e-4262.2Show/hide
Query:  EKENLATSYCIDVEEVDNSKKSEQRTSVFDRIKPPTTRPSVFQRMSMAATEEENQCSVSAFVRPSAFQRLSVSTSKKSRPSTSVFYRLKVTSDQPKRKMD
        E +N   SY    EEVDNS + +QRTSVFDRIKP TTR SVFQR+SMA  EE+NQC  S + R SAF+RLS+STSKK RPSTS F RLK+T+DQ +R+M 
Subjt:  EKENLATSYCIDVEEVDNSKKSEQRTSVFDRIKPPTTRPSVFQRMSMAATEEENQCSVSAFVRPSAFQRLSVSTSKKSRPSTSVFYRLKVTSDQPKRKMD

Query:  NLEVKLFDEVNRDKKLHSSVPSRMKRKFSVLITTEGSLKVKPNLIVLTNPINEGSDQDHDKDKS
        +L+ K F E N D K+H+ VPSRMKRK SV I TEGSL VKP  I+ TNPINEG ++  D++KS
Subjt:  NLEVKLFDEVNRDKKLHSSVPSRMKRKFSVLITTEGSLKVKPNLIVLTNPINEGSDQDHDKDKS

TYK08944.1 retrotransposon gag protein [Cucumis melo var. makuwa]5.2e-4262.2Show/hide
Query:  EKENLATSYCIDVEEVDNSKKSEQRTSVFDRIKPPTTRPSVFQRMSMAATEEENQCSVSAFVRPSAFQRLSVSTSKKSRPSTSVFYRLKVTSDQPKRKMD
        E +N   SY    EEVDNS + +QRTSVFDRIKP TTR SVFQR+SMA  EE+NQC  S + R SAF+RLS+STSKK RPSTS F RLK+T+DQ +R+M 
Subjt:  EKENLATSYCIDVEEVDNSKKSEQRTSVFDRIKPPTTRPSVFQRMSMAATEEENQCSVSAFVRPSAFQRLSVSTSKKSRPSTSVFYRLKVTSDQPKRKMD

Query:  NLEVKLFDEVNRDKKLHSSVPSRMKRKFSVLITTEGSLKVKPNLIVLTNPINEGSDQDHDKDKS
        +L+ K F E N D K+H+ VPSRMKRK SV I TEGSL VKP  I+ TNPINEG ++  D++KS
Subjt:  NLEVKLFDEVNRDKKLHSSVPSRMKRKFSVLITTEGSLKVKPNLIVLTNPINEGSDQDHDKDKS

TYK16519.1 retrotransposon gag protein [Cucumis melo var. makuwa]2.0e-4162.2Show/hide
Query:  EKENLATSYCIDVEEVDNSKKSEQRTSVFDRIKPPTTRPSVFQRMSMAATEEENQCSVSAFVRPSAFQRLSVSTSKKSRPSTSVFYRLKVTSDQPKRKMD
        E +N   SY    EEVDNS + +QRTSVFDRIKP TTR  VFQR+SMA  EEENQC  S + R SAF+RLS+STSKK RPSTS F RLK+T++Q KR+M 
Subjt:  EKENLATSYCIDVEEVDNSKKSEQRTSVFDRIKPPTTRPSVFQRMSMAATEEENQCSVSAFVRPSAFQRLSVSTSKKSRPSTSVFYRLKVTSDQPKRKMD

Query:  NLEVKLFDEVNRDKKLHSSVPSRMKRKFSVLITTEGSLKVKPNLIVLTNPINEGSDQDHDKDKS
        + + K F E N D K+HS VPSRMKRK SV I TEGSL VKP  I+ TNPINEG ++  D++KS
Subjt:  NLEVKLFDEVNRDKKLHSSVPSRMKRKFSVLITTEGSLKVKPNLIVLTNPINEGSDQDHDKDKS

TYK18884.1 gag protease polyprotein [Cucumis melo var. makuwa]2.0e-4160.98Show/hide
Query:  EKENLATSYCIDVEEVDNSKKSEQRTSVFDRIKPPTTRPSVFQRMSMAATEEENQCSVSAFVRPSAFQRLSVSTSKKSRPSTSVFYRLKVTSDQPKRKMD
        E +N   SY    EE+DNS + +Q+TS+FDRIKP TTR SVFQR+SMA  EEENQC  S + R SAF+RLS+STSKK RPSTS F RLK+T+DQ +R+M 
Subjt:  EKENLATSYCIDVEEVDNSKKSEQRTSVFDRIKPPTTRPSVFQRMSMAATEEENQCSVSAFVRPSAFQRLSVSTSKKSRPSTSVFYRLKVTSDQPKRKMD

Query:  NLEVKLFDEVNRDKKLHSSVPSRMKRKFSVLITTEGSLKVKPNLIVLTNPINEGSDQDHDKDKS
        +L+ K F E N D K+HS VPSRMKRK S+ I T+GSL VKP LI+ TNPINEG ++  D++KS
Subjt:  NLEVKLFDEVNRDKKLHSSVPSRMKRKFSVLITTEGSLKVKPNLIVLTNPINEGSDQDHDKDKS

TrEMBL top hitse value%identityAlignment
A0A5A7TQ06 Retrotransposon gag protein5.1e-4366.23Show/hide
Query:  EEVDNSKKSEQRTSVFDRIKPPTTRPSVFQRMSMAATEEENQCSVSAFVRPSAFQRLSVSTSKKSRPSTSVFYRLKVTSDQPKRKMDNLEVKLFDEVNRD
        EEVDNS + +QRTSVFDRIKP TTR SVFQR+SMA  EEENQC  S + R SAF+RLS+STSKK RPSTS F RLK+T+DQ +R+M +L+ K F E N D
Subjt:  EEVDNSKKSEQRTSVFDRIKPPTTRPSVFQRMSMAATEEENQCSVSAFVRPSAFQRLSVSTSKKSRPSTSVFYRLKVTSDQPKRKMDNLEVKLFDEVNRD

Query:  KKLHSSVPSRMKRKFSVLITTEGSLKVKPNLIVLTNPINEGSDQDHDKDKS
         K+HS VPSRMKRK SV I TEGSL VKP  I+ TNPINEG ++  D++KS
Subjt:  KKLHSSVPSRMKRKFSVLITTEGSLKVKPNLIVLTNPINEGSDQDHDKDKS

A0A5A7UI09 Retrotransposon gag protein2.5e-4262.2Show/hide
Query:  EKENLATSYCIDVEEVDNSKKSEQRTSVFDRIKPPTTRPSVFQRMSMAATEEENQCSVSAFVRPSAFQRLSVSTSKKSRPSTSVFYRLKVTSDQPKRKMD
        E +N   SY    EEVDNS + +QRTSVFDRIKP TTR SVFQR+SMA  EE+NQC  S + R SAF+RLS+STSKK RPSTS F RLK+T+DQ +R+M 
Subjt:  EKENLATSYCIDVEEVDNSKKSEQRTSVFDRIKPPTTRPSVFQRMSMAATEEENQCSVSAFVRPSAFQRLSVSTSKKSRPSTSVFYRLKVTSDQPKRKMD

Query:  NLEVKLFDEVNRDKKLHSSVPSRMKRKFSVLITTEGSLKVKPNLIVLTNPINEGSDQDHDKDKS
        +L+ K F E N D K+H+ VPSRMKRK SV I TEGSL VKP  I+ TNPINEG ++  D++KS
Subjt:  NLEVKLFDEVNRDKKLHSSVPSRMKRKFSVLITTEGSLKVKPNLIVLTNPINEGSDQDHDKDKS

A0A5D3CCI8 Retrotransposon gag protein2.5e-4262.2Show/hide
Query:  EKENLATSYCIDVEEVDNSKKSEQRTSVFDRIKPPTTRPSVFQRMSMAATEEENQCSVSAFVRPSAFQRLSVSTSKKSRPSTSVFYRLKVTSDQPKRKMD
        E +N   SY    EEVDNS + +QRTSVFDRIKP TTR SVFQR+SMA  EE+NQC  S + R SAF+RLS+STSKK RPSTS F RLK+T+DQ +R+M 
Subjt:  EKENLATSYCIDVEEVDNSKKSEQRTSVFDRIKPPTTRPSVFQRMSMAATEEENQCSVSAFVRPSAFQRLSVSTSKKSRPSTSVFYRLKVTSDQPKRKMD

Query:  NLEVKLFDEVNRDKKLHSSVPSRMKRKFSVLITTEGSLKVKPNLIVLTNPINEGSDQDHDKDKS
        +L+ K F E N D K+H+ VPSRMKRK SV I TEGSL VKP  I+ TNPINEG ++  D++KS
Subjt:  NLEVKLFDEVNRDKKLHSSVPSRMKRKFSVLITTEGSLKVKPNLIVLTNPINEGSDQDHDKDKS

A0A5D3D209 Retrotransposon gag protein9.5e-4262.2Show/hide
Query:  EKENLATSYCIDVEEVDNSKKSEQRTSVFDRIKPPTTRPSVFQRMSMAATEEENQCSVSAFVRPSAFQRLSVSTSKKSRPSTSVFYRLKVTSDQPKRKMD
        E +N   SY    EEVDNS + +QRTSVFDRIKP TTR  VFQR+SMA  EEENQC  S + R SAF+RLS+STSKK RPSTS F RLK+T++Q KR+M 
Subjt:  EKENLATSYCIDVEEVDNSKKSEQRTSVFDRIKPPTTRPSVFQRMSMAATEEENQCSVSAFVRPSAFQRLSVSTSKKSRPSTSVFYRLKVTSDQPKRKMD

Query:  NLEVKLFDEVNRDKKLHSSVPSRMKRKFSVLITTEGSLKVKPNLIVLTNPINEGSDQDHDKDKS
        + + K F E N D K+HS VPSRMKRK SV I TEGSL VKP  I+ TNPINEG ++  D++KS
Subjt:  NLEVKLFDEVNRDKKLHSSVPSRMKRKFSVLITTEGSLKVKPNLIVLTNPINEGSDQDHDKDKS

A0A5D3D5Q0 Gag protease polyprotein9.5e-4260.98Show/hide
Query:  EKENLATSYCIDVEEVDNSKKSEQRTSVFDRIKPPTTRPSVFQRMSMAATEEENQCSVSAFVRPSAFQRLSVSTSKKSRPSTSVFYRLKVTSDQPKRKMD
        E +N   SY    EE+DNS + +Q+TS+FDRIKP TTR SVFQR+SMA  EEENQC  S + R SAF+RLS+STSKK RPSTS F RLK+T+DQ +R+M 
Subjt:  EKENLATSYCIDVEEVDNSKKSEQRTSVFDRIKPPTTRPSVFQRMSMAATEEENQCSVSAFVRPSAFQRLSVSTSKKSRPSTSVFYRLKVTSDQPKRKMD

Query:  NLEVKLFDEVNRDKKLHSSVPSRMKRKFSVLITTEGSLKVKPNLIVLTNPINEGSDQDHDKDKS
        +L+ K F E N D K+HS VPSRMKRK S+ I T+GSL VKP LI+ TNPINEG ++  D++KS
Subjt:  NLEVKLFDEVNRDKKLHSSVPSRMKRKFSVLITTEGSLKVKPNLIVLTNPINEGSDQDHDKDKS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGAATAAATCCTTCTCCAAAACTTTCCACAAAAAGGAAAAAGAGAACCTTGCAACTTCCTACTGCATCGATGTAGAAGAAGTTGACAATTCCAAGAAGAGTGAACA
AAGGACTTCCGTCTTCGATCGCATCAAGCCTCCAACTACTCGTCCTTCGGTATTCCAAAGAATGAGTATGGCCGCGACAGAAGAAGAAAATCAATGTTCGGTGTCCGCCT
TCGTTCGACCTTCAGCTTTCCAAAGGCTTAGTGTCTCTACATCGAAGAAAAGTCGACCTTCGACATCTGTTTTTTATCGCCTCAAAGTAACAAGCGATCAACCTAAAAGA
AAGATGGACAACTTGGAGGTGAAACTTTTCGATGAAGTAAACCGCGACAAGAAGCTTCATAGTAGCGTCCCGTCACGTATGAAGAGGAAATTCTCTGTTCTCATAACTAC
AGAAGGTTCCTTGAAGGTGAAGCCAAATCTCATTGTCTTGACTAATCCTATAAATGAAGGATCTGATCAAGACCATGATAAAGATAAGAGCTTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTGAATAAATCCTTCTCCAAAACTTTCCACAAAAAGGAAAAAGAGAACCTTGCAACTTCCTACTGCATCGATGTAGAAGAAGTTGACAATTCCAAGAAGAGTGAACA
AAGGACTTCCGTCTTCGATCGCATCAAGCCTCCAACTACTCGTCCTTCGGTATTCCAAAGAATGAGTATGGCCGCGACAGAAGAAGAAAATCAATGTTCGGTGTCCGCCT
TCGTTCGACCTTCAGCTTTCCAAAGGCTTAGTGTCTCTACATCGAAGAAAAGTCGACCTTCGACATCTGTTTTTTATCGCCTCAAAGTAACAAGCGATCAACCTAAAAGA
AAGATGGACAACTTGGAGGTGAAACTTTTCGATGAAGTAAACCGCGACAAGAAGCTTCATAGTAGCGTCCCGTCACGTATGAAGAGGAAATTCTCTGTTCTCATAACTAC
AGAAGGTTCCTTGAAGGTGAAGCCAAATCTCATTGTCTTGACTAATCCTATAAATGAAGGATCTGATCAAGACCATGATAAAGATAAGAGCTTTTAA
Protein sequenceShow/hide protein sequence
MLNKSFSKTFHKKEKENLATSYCIDVEEVDNSKKSEQRTSVFDRIKPPTTRPSVFQRMSMAATEEENQCSVSAFVRPSAFQRLSVSTSKKSRPSTSVFYRLKVTSDQPKR
KMDNLEVKLFDEVNRDKKLHSSVPSRMKRKFSVLITTEGSLKVKPNLIVLTNPINEGSDQDHDKDKSF