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Lag0022240 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0022240
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase
Genome locationchr7:21834163..21834510
RNA-Seq ExpressionLag0022240
SyntenyLag0022240
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
WP_217833153.1 retrotransposon gag domain-containing protein, partial [Synechococcus sp. PCC 7002]1.7e-0939.77Show/hide
Query:  FIKEQKVLNVNLQSTVNTLVTSVNNHDVVLENIEVQLGEIATIVNALQKGKFPSDIEVNPREQCKVITLWSGTKLKD--VLDEERKKK
        F+KE +     L+++V  + ++V +    L+N+EVQL ++ T +  +QKGKFPS  E+NPRE+CK +TL SG KL    ++DE+ +++
Subjt:  FIKEQKVLNVNLQSTVNTLVTSVNNHDVVLENIEVQLGEIATIVNALQKGKFPSDIEVNPREQCKVITLWSGTKLKD--VLDEERKKK

XP_023881727.1 uncharacterized protein LOC111994101 [Quercus suber]1.7e-0942.86Show/hide
Query:  FIKEQKVLNVNLQSTVNTLVTSVNNHDVVLENIEVQLGEIATIVNALQKGKFPSDIEVNPREQCKVITLWSGTKLKDVLDEERK
        F++E K       S ++ + T  +N    ++N+EVQ+G++AT +NA Q+G FPS+IEVNP+EQCK ITL SG +++  L    K
Subjt:  FIKEQKVLNVNLQSTVNTLVTSVNNHDVVLENIEVQLGEIATIVNALQKGKFPSDIEVNPREQCKVITLWSGTKLKDVLDEERK

XP_023903214.1 uncharacterized protein LOC112015077 [Quercus suber]4.9e-0943.42Show/hide
Query:  FIKEQKVLNVNLQSTVNTLVTSVNNHDVVLENIEVQLGEIATIVNALQKGKFPSDIEVNPREQCKVITLWSGTKLK
        F++E K       S ++ + T  +N    ++N+EVQ+G++AT +NA Q+G FPS+ EVNP+EQCK ITL SG +++
Subjt:  FIKEQKVLNVNLQSTVNTLVTSVNNHDVVLENIEVQLGEIATIVNALQKGKFPSDIEVNPREQCKVITLWSGTKLK

XP_030939518.1 uncharacterized protein LOC115964323 [Quercus lobata]6.4e-0941.46Show/hide
Query:  FIKEQKVLNVNLQSTVNTLVTSVNNHDVVLENIEVQLGEIATIVNALQKGKFPSDIEVNPREQCKVITLWSGTKLKDVLDEE
        F++E K       S ++ + T  +N    ++N+EVQ+G++AT +NA Q+G FP++ EVNP+EQCK ITL SG ++K    +E
Subjt:  FIKEQKVLNVNLQSTVNTLVTSVNNHDVVLENIEVQLGEIATIVNALQKGKFPSDIEVNPREQCKVITLWSGTKLKDVLDEE

XP_035539656.1 uncharacterized protein LOC118344026 [Juglans regia]2.2e-0946.67Show/hide
Query:  FIKEQKVLNVNLQSTVNTLVTSVNNHDVVLENIEVQLGEIATIVNALQKGKFPSDIEVNPREQCKVITLWSGTKL
        F++E         S ++ + T  +N    ++NIEVQ+G++AT +NA Q+G FPS+ EVNPREQCK ITL SG +L
Subjt:  FIKEQKVLNVNLQSTVNTLVTSVNNHDVVLENIEVQLGEIATIVNALQKGKFPSDIEVNPREQCKVITLWSGTKL

TrEMBL top hitse value%identityAlignment
A0A2I4G4Q3 uncharacterized protein LOC1090047124.5e-0843.68Show/hide
Query:  FIKEQKVLNVNLQSTVNTLVTSVNNHDVVL-ENIEVQLGEIATIVNALQKGKFPSDIEVNPREQCKVITLWSGTKLKDVLDEERKKK
        FI+E         S ++ + T  +N    + +NIEVQ+G++AT +NA Q+G FPS+ EVNPREQCK I L SG +L+  L+ E  K+
Subjt:  FIKEQKVLNVNLQSTVNTLVTSVNNHDVVL-ENIEVQLGEIATIVNALQKGKFPSDIEVNPREQCKVITLWSGTKLKDVLDEERKKK

A0A2P5B220 Uncharacterized protein1.3e-0738.64Show/hide
Query:  VALFIKEQKVLNVNLQSTVNTLVTSVNNHDVVLENIEVQLGEIATIVNALQKGKFPSDIEVNPREQCKVITLWSGTKLKDVLDEERKK
        ++LFI E K      ++   T+ T +N+   ++++ EVQLG++AT +N+ Q+GKFPSD E NP+E C +I L +G K+     +E  K
Subjt:  VALFIKEQKVLNVNLQSTVNTLVTSVNNHDVVLENIEVQLGEIATIVNALQKGKFPSDIEVNPREQCKVITLWSGTKLKDVLDEERKK

A0A6J1DU19 uncharacterized protein LOC1110243613.1e-0935.65Show/hide
Query:  MVALFIKEQKVLNVNLQSTVNTLVTSVNNHDVVLENIEVQLGEIATIVNALQKGKFPSDIEVNPREQCKVITLWSGTKLKD----------VLDEERKKK
        ++  FI E +     +++ V  +   +  +   ++N+EVQ+G+IA  +N +QKGKFPSDIEV PRE CK +TL SG +L++          +  EER+ K
Subjt:  MVALFIKEQKVLNVNLQSTVNTLVTSVNNHDVVLENIEVQLGEIATIVNALQKGKFPSDIEVNPREQCKVITLWSGTKLKD----------VLDEERKKK

Query:  EKESKDEDGGVEAEK
        E+  K+    ++A+K
Subjt:  EKESKDEDGGVEAEK

A0A6J1E1F6 uncharacterized protein LOC1110255512.6e-0840.45Show/hide
Query:  VNNHDVVLENIEVQLGEIATIVNALQKGKFPSDIEVNPREQCKVITLWSGTKLKD----------VLDEERKKKEKESKDEDGGVEAEK
        +  +   ++N+EVQ+G++A+ +N +QKGKFPSD EVNPRE CK +TL SG +L++          +  EER+ KE+  K+    ++A+K
Subjt:  VNNHDVVLENIEVQLGEIATIVNALQKGKFPSDIEVNPREQCKVITLWSGTKLKD----------VLDEERKKKEKESKDEDGGVEAEK

A0A6P9DWY0 uncharacterized protein LOC1183440261.1e-0946.67Show/hide
Query:  FIKEQKVLNVNLQSTVNTLVTSVNNHDVVLENIEVQLGEIATIVNALQKGKFPSDIEVNPREQCKVITLWSGTKL
        F++E         S ++ + T  +N    ++NIEVQ+G++AT +NA Q+G FPS+ EVNPREQCK ITL SG +L
Subjt:  FIKEQKVLNVNLQSTVNTLVTSVNNHDVVLENIEVQLGEIATIVNALQKGKFPSDIEVNPREQCKVITLWSGTKL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGGCATTGTTTATTAAGGAACAGAAGGTCTTAAATGTCAACCTTCAGTCCACCGTAAACACTCTGGTAACCTCTGTTAACAATCATGATGTTGTTCTAGAAAATAT
AGAGGTCCAGTTGGGAGAAATAGCAACTATAGTGAATGCCCTTCAGAAAGGCAAGTTTCCAAGCGACATAGAAGTTAACCCGAGAGAGCAATGTAAGGTTATCACGCTCT
GGAGTGGAACGAAACTGAAGGATGTGTTGGATGAAGAAAGAAAGAAGAAGGAGAAAGAGAGTAAGGATGAAGATGGAGGGGTTGAGGCAGAAAAAAACCTCCAAAGACAG
GTCCCAAAATCCTACTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTGGCATTGTTTATTAAGGAACAGAAGGTCTTAAATGTCAACCTTCAGTCCACCGTAAACACTCTGGTAACCTCTGTTAACAATCATGATGTTGTTCTAGAAAATAT
AGAGGTCCAGTTGGGAGAAATAGCAACTATAGTGAATGCCCTTCAGAAAGGCAAGTTTCCAAGCGACATAGAAGTTAACCCGAGAGAGCAATGTAAGGTTATCACGCTCT
GGAGTGGAACGAAACTGAAGGATGTGTTGGATGAAGAAAGAAAGAAGAAGGAGAAAGAGAGTAAGGATGAAGATGGAGGGGTTGAGGCAGAAAAAAACCTCCAAAGACAG
GTCCCAAAATCCTACTAG
Protein sequenceShow/hide protein sequence
MVALFIKEQKVLNVNLQSTVNTLVTSVNNHDVVLENIEVQLGEIATIVNALQKGKFPSDIEVNPREQCKVITLWSGTKLKDVLDEERKKKEKESKDEDGGVEAEKNLQRQ
VPKSY