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Lag0022249 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0022249
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrotransposon protein
Genome locationchr7:21982809..21985913
RNA-Seq ExpressionLag0022249
SyntenyLag0022249
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0026116.1 retrotransposon protein [Cucumis melo var. makuwa]1.5e-1465Show/hide
Query:  TSASKKEKHIWTPEEDAVLVQCLVHLVQVGGWCGDNGTFRPGFQNQIGKMMKEKIPGCNI
        TS+S+  KH WT EE+A LV+CLV LV  GGW  DNGTFRPG+ NQ+ +MM  KIPGCNI
Subjt:  TSASKKEKHIWTPEEDAVLVQCLVHLVQVGGWCGDNGTFRPGFQNQIGKMMKEKIPGCNI
KAA0047233.1 retrotransposon protein [Cucumis melo var. makuwa]8.8e-1565Show/hide
Query:  TSASKKEKHIWTPEEDAVLVQCLVHLVQVGGWCGDNGTFRPGFQNQIGKMMKEKIPGCNI
        TS+S+  KH WT EE+A LV+CLV LV  GGW  DNGTFRPG+ NQ+ +MM  KIPGCNI
Subjt:  TSASKKEKHIWTPEEDAVLVQCLVHLVQVGGWCGDNGTFRPGFQNQIGKMMKEKIPGCNI
KAA0054689.1 retrotransposon protein [Cucumis melo var. makuwa]1.5e-1465Show/hide
Query:  TSASKKEKHIWTPEEDAVLVQCLVHLVQVGGWCGDNGTFRPGFQNQIGKMMKEKIPGCNI
        TS+S+  KH WT EE+A LV+CLV LV  GGW  DNGTFRPG+ NQ+ +MM  KIPGCNI
Subjt:  TSASKKEKHIWTPEEDAVLVQCLVHLVQVGGWCGDNGTFRPGFQNQIGKMMKEKIPGCNI
TYJ99726.1 retrotransposon protein [Cucumis melo var. makuwa]8.8e-1565Show/hide
Query:  TSASKKEKHIWTPEEDAVLVQCLVHLVQVGGWCGDNGTFRPGFQNQIGKMMKEKIPGCNI
        TS+S+  KH WT EE+A LV+CLV LV  GGW  DNGTFRPG+ NQ+ +MM  KIPGCNI
Subjt:  TSASKKEKHIWTPEEDAVLVQCLVHLVQVGGWCGDNGTFRPGFQNQIGKMMKEKIPGCNI
TYK10662.1 retrotransposon protein [Cucumis melo var. makuwa]8.8e-1565Show/hide
Query:  TSASKKEKHIWTPEEDAVLVQCLVHLVQVGGWCGDNGTFRPGFQNQIGKMMKEKIPGCNI
        TS+S+  KH WT EE+A LV+CLV LV  GGW  DNGTFRPG+ NQ+ +MM  KIPGCNI
Subjt:  TSASKKEKHIWTPEEDAVLVQCLVHLVQVGGWCGDNGTFRPGFQNQIGKMMKEKIPGCNI
TrEMBL top hitse value%identityAlignment
A0A5A7SJZ2 Retrotransposon protein7.3e-1565Show/hide
Query:  TSASKKEKHIWTPEEDAVLVQCLVHLVQVGGWCGDNGTFRPGFQNQIGKMMKEKIPGCNI
        TS+S+  KH WT EE+A LV+CLV LV  GGW  DNGTFRPG+ NQ+ +MM  KIPGCNI
Subjt:  TSASKKEKHIWTPEEDAVLVQCLVHLVQVGGWCGDNGTFRPGFQNQIGKMMKEKIPGCNI
A0A5A7TUJ7 Retrotransposon protein4.3e-1565Show/hide
Query:  TSASKKEKHIWTPEEDAVLVQCLVHLVQVGGWCGDNGTFRPGFQNQIGKMMKEKIPGCNI
        TS+S+  KH WT EE+A LV+CLV LV  GGW  DNGTFRPG+ NQ+ +MM  KIPGCNI
Subjt:  TSASKKEKHIWTPEEDAVLVQCLVHLVQVGGWCGDNGTFRPGFQNQIGKMMKEKIPGCNI
A0A5A7UMK8 Retrotransposon protein7.3e-1565Show/hide
Query:  TSASKKEKHIWTPEEDAVLVQCLVHLVQVGGWCGDNGTFRPGFQNQIGKMMKEKIPGCNI
        TS+S+  KH WT EE+A LV+CLV LV  GGW  DNGTFRPG+ NQ+ +MM  KIPGCNI
Subjt:  TSASKKEKHIWTPEEDAVLVQCLVHLVQVGGWCGDNGTFRPGFQNQIGKMMKEKIPGCNI
A0A5D3BKP9 Retrotransposon protein4.3e-1565Show/hide
Query:  TSASKKEKHIWTPEEDAVLVQCLVHLVQVGGWCGDNGTFRPGFQNQIGKMMKEKIPGCNI
        TS+S+  KH WT EE+A LV+CLV LV  GGW  DNGTFRPG+ NQ+ +MM  KIPGCNI
Subjt:  TSASKKEKHIWTPEEDAVLVQCLVHLVQVGGWCGDNGTFRPGFQNQIGKMMKEKIPGCNI
A0A5D3CHB8 Retrotransposon protein4.3e-1565Show/hide
Query:  TSASKKEKHIWTPEEDAVLVQCLVHLVQVGGWCGDNGTFRPGFQNQIGKMMKEKIPGCNI
        TS+S+  KH WT EE+A LV+CLV LV  GGW  DNGTFRPG+ NQ+ +MM  KIPGCNI
Subjt:  TSASKKEKHIWTPEEDAVLVQCLVHLVQVGGWCGDNGTFRPGFQNQIGKMMKEKIPGCNI
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGATGGCAGCGCCTACCTCAGCTTCGAAGAAAGAGAAACACATCTGGACACCGGAAGAAGACGCAGTCCTTGTGCAGTGCCTAGTTCACCTAGTCCAAGTGGGGGG
ATGGTGTGGAGATAATGGGACGTTTCGTCCAGGCTTCCAGAATCAAATTGGGAAGATGATGAAAGAAAAGATACCAGGATGCAACATAGTCTGGATTTGGTTGGAACGAG
GAGAGGAACTGCATAGAGGCGGAGAAGGAGATTTTCGATTTGTGGGTAGAGCCGATCTTGATGACGACATGAACGTGGACTACAAGGATTGCTACGTCCCTAGTCCCCTG
TTATTGATCCCACGCTTGGAGACGAATTCTGTGGGACACCGACTGGGACACCAACTGGTAGAACGGGTGGTGCAGGACCTTCTAGGCCAGTACATAAGAGACGACTGTCA
ATTGGAAACGTGGCAGAGAATGGAAGTTCAACTACTGTATGGAGATCCTCGGGAGGGCACCGAGACAGGCGTCGCAGCCATGATCAATCACTTCACTTGCTTTGATACCT
ATCCAACTGCACAATCCCAACCCTGCACTCCAAACATAGACATCAGCATGATTCCAGCCCAAATCCAGTGCACCAAACACAGGCATCAGATTAATTCCAGCCCAAATCCA
GCAAACCAAACACAGGCATCTGCATTCCCAGGAATCCATATTCCAGAAAAATATTCCCATCGTAATCAGATTTCATTCCATTCCATTCCAAACCCATTCAATTCAAGCGC
ACCAAACGACCCCTTAGCGTCGAGATGCTGCGATGTCTTGGCGCCCAAGTTGACTACGTCACAGCATCGCGACGTTGTCCCTGCTGAAGGCCTATATAAAGCGCATCAAT
TCTACTTGTCCCGAGCTCAAAATATGCTAAAGATGGAAAACAGAGGTAGAACTGGAATTTACCCGAAATGCGACCGCATTTCTGGAAGGCAAAATGAAATGCGACCGCAT
TTCTGGAAAAACGGAGGCAGTTCCGAGTCGTCTGCAGAAAGACGTGAAACTATCGCAGCGTCTCGACGCTGCGAACTGAGCATCTCGACGCTGCTAGACTTCCTTTTCCA
GAACGCGTGTTTTGAAGACAGCGTCGAGACGCTGTCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCAGATGGCAGCGCCTACCTCAGCTTCGAAGAAAGAGAAACACATCTGGACACCGGAAGAAGACGCAGTCCTTGTGCAGTGCCTAGTTCACCTAGTCCAAGTGGGGGG
ATGGTGTGGAGATAATGGGACGTTTCGTCCAGGCTTCCAGAATCAAATTGGGAAGATGATGAAAGAAAAGATACCAGGATGCAACATAGTCTGGATTTGGTTGGAACGAG
GAGAGGAACTGCATAGAGGCGGAGAAGGAGATTTTCGATTTGTGGGTAGAGCCGATCTTGATGACGACATGAACGTGGACTACAAGGATTGCTACGTCCCTAGTCCCCTG
TTATTGATCCCACGCTTGGAGACGAATTCTGTGGGACACCGACTGGGACACCAACTGGTAGAACGGGTGGTGCAGGACCTTCTAGGCCAGTACATAAGAGACGACTGTCA
ATTGGAAACGTGGCAGAGAATGGAAGTTCAACTACTGTATGGAGATCCTCGGGAGGGCACCGAGACAGGCGTCGCAGCCATGATCAATCACTTCACTTGCTTTGATACCT
ATCCAACTGCACAATCCCAACCCTGCACTCCAAACATAGACATCAGCATGATTCCAGCCCAAATCCAGTGCACCAAACACAGGCATCAGATTAATTCCAGCCCAAATCCA
GCAAACCAAACACAGGCATCTGCATTCCCAGGAATCCATATTCCAGAAAAATATTCCCATCGTAATCAGATTTCATTCCATTCCATTCCAAACCCATTCAATTCAAGCGC
ACCAAACGACCCCTTAGCGTCGAGATGCTGCGATGTCTTGGCGCCCAAGTTGACTACGTCACAGCATCGCGACGTTGTCCCTGCTGAAGGCCTATATAAAGCGCATCAAT
TCTACTTGTCCCGAGCTCAAAATATGCTAAAGATGGAAAACAGAGGTAGAACTGGAATTTACCCGAAATGCGACCGCATTTCTGGAAGGCAAAATGAAATGCGACCGCAT
TTCTGGAAAAACGGAGGCAGTTCCGAGTCGTCTGCAGAAAGACGTGAAACTATCGCAGCGTCTCGACGCTGCGAACTGAGCATCTCGACGCTGCTAGACTTCCTTTTCCA
GAACGCGTGTTTTGAAGACAGCGTCGAGACGCTGTCTTGA
Protein sequenceShow/hide protein sequence
MQMAAPTSASKKEKHIWTPEEDAVLVQCLVHLVQVGGWCGDNGTFRPGFQNQIGKMMKEKIPGCNIVWIWLERGEELHRGGEGDFRFVGRADLDDDMNVDYKDCYVPSPL
LLIPRLETNSVGHRLGHQLVERVVQDLLGQYIRDDCQLETWQRMEVQLLYGDPREGTETGVAAMINHFTCFDTYPTAQSQPCTPNIDISMIPAQIQCTKHRHQINSSPNP
ANQTQASAFPGIHIPEKYSHRNQISFHSIPNPFNSSAPNDPLASRCCDVLAPKLTTSQHRDVVPAEGLYKAHQFYLSRAQNMLKMENRGRTGIYPKCDRISGRQNEMRPH
FWKNGGSSESSAERRETIAASRRCELSISTLLDFLFQNACFEDSVETLS