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Lag0022256 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0022256
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase
Genome locationchr7:22296539..22301751
RNA-Seq ExpressionLag0022256
SyntenyLag0022256
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
WP_217833153.1 retrotransposon gag domain-containing protein, partial [Synechococcus sp. PCC 7002]1.8e-1754.55Show/hide
Query:  QQQDDAPKAIRDFLQSVFPIENSAIVYAPIQANNFELMTRLIQMARDNCFKGHPSEDPHSHLRSFLEICRTVKMNGVPIDVIRLSRRP
        +  ++ PKAIRD+ Q   P     I+  PI  NNFEL   LIQMAR+  F+G  +EDPH HLRSFLEIC TVKMNGV  D I+L   P
Subjt:  QQQDDAPKAIRDFLQSVFPIENSAIVYAPIQANNFELMTRLIQMARDNCFKGHPSEDPHSHLRSFLEICRTVKMNGVPIDVIRLSRRP

XP_022157708.1 uncharacterized protein LOC111024361 [Momordica charantia]3.8e-1248.86Show/hide
Query:  QQQDDAPKAIRDFLQSVFPIENSAIVYAPIQANNFELMTRLIQMARDNCFKGHPSEDPHSHLRSFLEICRTVKMNGVPIDVIRLSRRP
        Q + +    IRD+ Q  FP  +  I+  PI ANN EL   LIQM R+N F+G+ +EDP++HL  FL++C TVKMNGV  D IRL   P
Subjt:  QQQDDAPKAIRDFLQSVFPIENSAIVYAPIQANNFELMTRLIQMARDNCFKGHPSEDPHSHLRSFLEICRTVKMNGVPIDVIRLSRRP

XP_022859866.1 uncharacterized protein LOC111380514 [Olea europaea var. sylvestris]1.3e-1251.76Show/hide
Query:  AQQQDDAPKAIRDFLQSVFPIENSAIVYAPIQANNFELMTRLIQMARDNCFKGHPSEDPHSHLRSFLEICRTVKMNGVPIDVIRL
        A  +D+  +AIRD+++ V     S I    I ANNFEL + LI M + N F G   EDP++HL SFLEIC TVKMNGV  D IRL
Subjt:  AQQQDDAPKAIRDFLQSVFPIENSAIVYAPIQANNFELMTRLIQMARDNCFKGHPSEDPHSHLRSFLEICRTVKMNGVPIDVIRL

XP_022860306.1 uncharacterized protein LOC111380876 [Olea europaea var. sylvestris]1.1e-1150.59Show/hide
Query:  AQQQDDAPKAIRDFLQSVFPIENSAIVYAPIQANNFELMTRLIQMARDNCFKGHPSEDPHSHLRSFLEICRTVKMNGVPIDVIRL
        A  +D+  +AIRD+++ V     S I +  I ANNFEL   LI M + N F G   ED ++HL SFLEIC TVKMNGV  D IRL
Subjt:  AQQQDDAPKAIRDFLQSVFPIENSAIVYAPIQANNFELMTRLIQMARDNCFKGHPSEDPHSHLRSFLEICRTVKMNGVPIDVIRL

XP_022861677.1 uncharacterized protein LOC111382049 [Olea europaea var. sylvestris]9.9e-1352.94Show/hide
Query:  AQQQDDAPKAIRDFLQSVFPIENSAIVYAPIQANNFELMTRLIQMARDNCFKGHPSEDPHSHLRSFLEICRTVKMNGVPIDVIRL
        A  +D+   AI D+++ V     S I    I ANNFEL  RLI M + N F G P+EDP++HL SFLEIC TVKMNGV  D IRL
Subjt:  AQQQDDAPKAIRDFLQSVFPIENSAIVYAPIQANNFELMTRLIQMARDNCFKGHPSEDPHSHLRSFLEICRTVKMNGVPIDVIRL

TrEMBL top hitse value%identityAlignment
A0A6J1DU19 uncharacterized protein LOC1110243611.8e-1248.86Show/hide
Query:  QQQDDAPKAIRDFLQSVFPIENSAIVYAPIQANNFELMTRLIQMARDNCFKGHPSEDPHSHLRSFLEICRTVKMNGVPIDVIRLSRRP
        Q + +    IRD+ Q  FP  +  I+  PI ANN EL   LIQM R+N F+G+ +EDP++HL  FL++C TVKMNGV  D IRL   P
Subjt:  QQQDDAPKAIRDFLQSVFPIENSAIVYAPIQANNFELMTRLIQMARDNCFKGHPSEDPHSHLRSFLEICRTVKMNGVPIDVIRLSRRP

A0A6P8C2P4 uncharacterized protein LOC1161901071.0e-1048.86Show/hide
Query:  QQQDDAPKAIRDFLQSVFPIENSAIVYAPIQANNFELMTRLIQMARDNCFKGHPSEDPHSHLRSFLEICRTVKMNGVPIDVIRLSRRP
        +Q   A +A+RD+  +V  I  SAI    I ANNFEL   LIQM + N F G+P+E P  H+  FL+ C TVKMN V  DVIRL   P
Subjt:  QQQDDAPKAIRDFLQSVFPIENSAIVYAPIQANNFELMTRLIQMARDNCFKGHPSEDPHSHLRSFLEICRTVKMNGVPIDVIRLSRRP

A0A6P8CDK6 Reverse transcriptase1.0e-1048.86Show/hide
Query:  QQQDDAPKAIRDFLQSVFPIENSAIVYAPIQANNFELMTRLIQMARDNCFKGHPSEDPHSHLRSFLEICRTVKMNGVPIDVIRLSRRP
        +Q   A +A+RD+  +V  I  SAI    I ANNFEL   LIQM + N F G+P+E P  H+  FL+ C TVKMN V  DVIRL   P
Subjt:  QQQDDAPKAIRDFLQSVFPIENSAIVYAPIQANNFELMTRLIQMARDNCFKGHPSEDPHSHLRSFLEICRTVKMNGVPIDVIRLSRRP

A0A6P8CTC3 uncharacterized protein LOC1161938991.0e-1048.86Show/hide
Query:  QQQDDAPKAIRDFLQSVFPIENSAIVYAPIQANNFELMTRLIQMARDNCFKGHPSEDPHSHLRSFLEICRTVKMNGVPIDVIRLSRRP
        +Q   A +A+RD+  +V  I  SAI    I ANNFEL   LIQM + N F G+P+E P  H+  FL+ C TVKMN V  DVIRL   P
Subjt:  QQQDDAPKAIRDFLQSVFPIENSAIVYAPIQANNFELMTRLIQMARDNCFKGHPSEDPHSHLRSFLEICRTVKMNGVPIDVIRLSRRP

A0A6P8DAI3 uncharacterized protein LOC1162029731.0e-1048.86Show/hide
Query:  QQQDDAPKAIRDFLQSVFPIENSAIVYAPIQANNFELMTRLIQMARDNCFKGHPSEDPHSHLRSFLEICRTVKMNGVPIDVIRLSRRP
        +Q   A +A+RD+  +V  I  SAI    I ANNFEL   LIQM + N F G+P+E P  H+  FL+ C TVKMN V  DVIRL   P
Subjt:  QQQDDAPKAIRDFLQSVFPIENSAIVYAPIQANNFELMTRLIQMARDNCFKGHPSEDPHSHLRSFLEICRTVKMNGVPIDVIRLSRRP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCCAACAACAAGACGACGCTCCCAAAGCAATCAGAGATTTTCTGCAGTCAGTTTTCCCAATCGAAAATTCCGCCATTGTTTATGCCCCCATTCAAGCGAACAACTT
TGAATTAATGACGAGATTGATCCAGATGGCGAGAGATAATTGTTTCAAGGGACATCCTTCGGAGGACCCACATTCCCATCTTCGATCATTCCTGGAGATTTGCAGGACAG
TAAAGATGAACGGAGTTCCGATCGATGTAATCAGATTGAGCCGCAGACCCCCCCCCTTCTGTGTTTTTTCAGCCGCCAGCACCCCGACTCCTCTCCCTCGCGCGTCTCTC
CCTCTGCGCGTCTCTCTCTCCGCGTGTTCTCCGCGCAGCGGCTCTAGCAGCCGCGTTCCTTCGTGCGTGGTTCGCGTGGTCTCTCCGTCTCTCTCCCGTGTTCTGACGCC
ACAGCAGCAACCCGTGCCCTGTGTCGCGAGCGTCGGCCAGCACCACAACTTCGGTTCTTCTCCTTCAACTCGCGTGTCGTTTCAGCGTGTTCGGACTCTTTCGAATGCCC
ATTCTTTAGGTGCTGAAAAGTTTAATGTTGTTCGATTTTCTGATCTGCAGCGCCGTCTAGGTGTTCGATTAGGTTCGAAACACATCGACTTGAATACCCACTGCCCAAGG
ATCGTTCTAGTGCGTTGTTCGAGGTTGTTGCAACCCGTCTTGCGTGATATCGGGTCCGTTGGAATTAGGTGTATTCGGTTGCTGTTCAGCGAGCGTTTGATCTCAAATAT
CGTGTTCAGCGAATACCCACAACCCGAAAGACCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCCAACAACAAGACGACGCTCCCAAAGCAATCAGAGATTTTCTGCAGTCAGTTTTCCCAATCGAAAATTCCGCCATTGTTTATGCCCCCATTCAAGCGAACAACTT
TGAATTAATGACGAGATTGATCCAGATGGCGAGAGATAATTGTTTCAAGGGACATCCTTCGGAGGACCCACATTCCCATCTTCGATCATTCCTGGAGATTTGCAGGACAG
TAAAGATGAACGGAGTTCCGATCGATGTAATCAGATTGAGCCGCAGACCCCCCCCCTTCTGTGTTTTTTCAGCCGCCAGCACCCCGACTCCTCTCCCTCGCGCGTCTCTC
CCTCTGCGCGTCTCTCTCTCCGCGTGTTCTCCGCGCAGCGGCTCTAGCAGCCGCGTTCCTTCGTGCGTGGTTCGCGTGGTCTCTCCGTCTCTCTCCCGTGTTCTGACGCC
ACAGCAGCAACCCGTGCCCTGTGTCGCGAGCGTCGGCCAGCACCACAACTTCGGTTCTTCTCCTTCAACTCGCGTGTCGTTTCAGCGTGTTCGGACTCTTTCGAATGCCC
ATTCTTTAGGTGCTGAAAAGTTTAATGTTGTTCGATTTTCTGATCTGCAGCGCCGTCTAGGTGTTCGATTAGGTTCGAAACACATCGACTTGAATACCCACTGCCCAAGG
ATCGTTCTAGTGCGTTGTTCGAGGTTGTTGCAACCCGTCTTGCGTGATATCGGGTCCGTTGGAATTAGGTGTATTCGGTTGCTGTTCAGCGAGCGTTTGATCTCAAATAT
CGTGTTCAGCGAATACCCACAACCCGAAAGACCTTGA
Protein sequenceShow/hide protein sequence
MAQQQDDAPKAIRDFLQSVFPIENSAIVYAPIQANNFELMTRLIQMARDNCFKGHPSEDPHSHLRSFLEICRTVKMNGVPIDVIRLSRRPPPFCVFSAASTPTPLPRASL
PLRVSLSACSPRSGSSSRVPSCVVRVVSPSLSRVLTPQQQPVPCVASVGQHHNFGSSPSTRVSFQRVRTLSNAHSLGAEKFNVVRFSDLQRRLGVRLGSKHIDLNTHCPR
IVLVRCSRLLQPVLRDIGSVGIRCIRLLFSERLISNIVFSEYPQPERP