; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0022258 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0022258
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr7:22333085..22339401
RNA-Seq ExpressionLag0022258
SyntenyLag0022258
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
GO:0016740 - transferase activity (molecular function)
InterPro domainsIPR000477 - Reverse transcriptase domain
IPR002156 - Ribonuclease H domain
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022158377.1 uncharacterized protein LOC111024874 [Momordica charantia]6.9e-5135.43Show/hide
Query:  MLKIGFHSVWVDLIMDCVKTAQFSILLNGVPIGTIIPQRGFRQGDPLSPYLFLLVLEVLSAMINETVSCNRIIGLKPGKFCPSVSHLFFADDNLIFCKAS
        M K+GF+  W+  I+ C+ T +FSI LNG P G   P RG RQGDPLSPYLFLL  E LSA+IN   +  R+ G+   +   S++HL FADD+LIF ++ 
Subjt:  MLKIGFHSVWVDLIMDCVKTAQFSILLNGVPIGTIIPQRGFRQGDPLSPYLFLLVLEVLSAMINETVSCNRIIGLKPGKFCPSVSHLFFADDNLIFCKAS

Query:  IEEVWAFRTLLKNYEKTSGQMVNVTKSALNFSPNVNIELRGFLYELLVMPVVDTLGKYL-----------NGKRL-------------------------
          E  A R LL +Y + SGQ +N +KSAL FSPNV+ E + +L  +L + +V   G YL             ++L                         
Subjt:  IEEVWAFRTLLKNYEKTSGQMVNVTKSALNFSPNVNIELRGFLYELLVMPVVDTLGKYL-----------NGKRL-------------------------

Query:  ----------------NFLLGK--GGKYAHNDSLLLAPIKANSSVFWRGFVWAKALIHACTRKMVGNGRSVKFFKDPWIPKEITFKP-------------
                        N L+ K    KY  + SLL A   + SS FW+GF+W + L+    R  VGNG ++K F DPW+P+  TFKP             
Subjt:  ----------------NFLLGK--GGKYAHNDSLLLAPIKANSSVFWRGFVWAKALIHACTRKMVGNGRSVKFFKDPWIPKEITFKP-------------

Query:  ----------------------RATIL---ICVSNEDDKWIWHFNKNGIYSVKSDYKLAMSLSVGQCSTSVEIQ-SQWNSV
                              R  IL   I   N  D W+WH++K G YSV+S YKL M L     S S   + +QWNS+
Subjt:  ----------------------RATIL---ICVSNEDDKWIWHFNKNGIYSVKSDYKLAMSLSVGQCSTSVEIQ-SQWNSV

XP_023920446.1 uncharacterized protein LOC112031976 [Quercus suber]2.2e-4133.33Show/hide
Query:  MLKIGFHSVWVDLIMDCVKTAQFSILLNGVPIGTIIPQRGFRQGDPLSPYLFLLVLEVLSAMINETVSCNRIIGLKPGKFCPSVSHLFFADDNLIFCKAS
        M K+GFHS W+  IM+CVK+  +SIL+NG P G II  RG RQGDPLSPYLFLL  E L+ +I   V C  I G+   +  P +SH+FFADD+L+FC+A 
Subjt:  MLKIGFHSVWVDLIMDCVKTAQFSILLNGVPIGTIIPQRGFRQGDPLSPYLFLLVLEVLSAMINETVSCNRIIGLKPGKFCPSVSHLFFADDNLIFCKAS

Query:  IEEVWAFRTLLKNYEKTSGQMVNVTKSALNFSPNVNIELRGFLYELLVMPVVDTLGKYLNGKRLNF----------LLGKGGKY------------AHN-
        + +V   +  L  YE+ SGQ +N  K+ L FS N  I  +  L  LL +P +    + L     NF           +G+ G++             HN 
Subjt:  IEEVWAFRTLLKNYEKTSGQMVNVTKSALNFSPNVNIELRGFLYELLVMPVVDTLGKYLNGKRLNF----------LLGKGGKY------------AHN-

Query:  DSLLLAPIKA----NSSVF----------WRGFVWAKALIHACTRKMVGNGRSVKFFKDPWIPK----------------------------------EI
        +SL     K     N S+F          W+  +W++ +I   +   +GNG+SV+ +KD W+P                                   ++
Subjt:  DSLLLAPIKA----NSSVF----------WRGFVWAKALIHACTRKMVGNGRSVKFFKDPWIPK----------------------------------EI

Query:  TFKPRATILI-----CVSNEDDKWIWHFNKNGIYSVKSDYKLAMSLSV
         F P   ILI       + + D  +W   K+G YSVKS YKL   L +
Subjt:  TFKPRATILI-----CVSNEDDKWIWHFNKNGIYSVKSDYKLAMSLSV

XP_030483444.1 uncharacterized protein LOC115700033 [Cannabis sativa]6.0e-4735.65Show/hide
Query:  LKIGFHSVWVDLIMDCVKTAQFSILLNGVPIGTIIPQRGFRQGDPLSPYLFLLVLEVLSAMINETVSCNRIIGLKPGKFCPSVSHLFFADDNLIFCKASI
        LK+GF   WVD +M CV +  +S  LNG   G +IP RG RQGDPLSPYLFL+ +E  SA+I        I+GLK  +  P +SHLFFADD+L+  KAS 
Subjt:  LKIGFHSVWVDLIMDCVKTAQFSILLNGVPIGTIIPQRGFRQGDPLSPYLFLLVLEVLSAMINETVSCNRIIGLKPGKFCPSVSHLFFADDNLIFCKASI

Query:  EEVWAFRTLLKNYEKTSGQMVNVTKSALNFSPNVNIELRGFLYELLVMPVVDTLGKYLNGKRLNF--------LLGK--GGKYAHNDSLLLAPIKANSSV
          + + +     Y + SGQM+N TKS L FSPN    +R      L M + + +  YL    + +        +L +    +Y    S L A   ++ S 
Subjt:  EEVWAFRTLLKNYEKTSGQMVNVTKSALNFSPNVNIELRGFLYELLVMPVVDTLGKYLNGKRLNF--------LLGK--GGKYAHNDSLLLAPIKANSSV

Query:  FWRGFVWAKALIHACTRKMVGNGRSVKFFKDPWIPKEITFKPRA-------------------------------------TILICVSNEDDKWIWHFNK
         WRG VW K L+    R+ +GNG + + FKDPWIP   +F P                                       +I I +   DD W+WHF  
Subjt:  FWRGFVWAKALIHACTRKMVGNGRSVKFFKDPWIPKEITFKPRA-------------------------------------TILICVSNEDDKWIWHFNK

Query:  NGIYSVKSDYKLAMSLSVGQCSTSVEIQSQW
        +  YSVKS Y LA+     Q S+S E+ + W
Subjt:  NGIYSVKSDYKLAMSLSVGQCSTSVEIQSQW

XP_030949498.1 uncharacterized protein LOC115973376 [Quercus lobata]3.8e-4135.27Show/hide
Query:  MLKIGFHSVWVDLIMDCVKTAQFSILLNGVPIGTIIPQRGFRQGDPLSPYLFLLVLEVLSAMINETVSCNRIIGLKPGKFCPSVSHLFFADDNLIFCKAS
        M+K+GFH  W+ L+M CV +  +++ +NG P G I+P RG RQ DPLSPYLFL+ +E LSA++++ V    + G+      P++SHLFF DD+LIF +A+
Subjt:  MLKIGFHSVWVDLIMDCVKTAQFSILLNGVPIGTIIPQRGFRQGDPLSPYLFLLVLEVLSAMINETVSCNRIIGLKPGKFCPSVSHLFFADDNLIFCKAS

Query:  IEEVWAFRTLLKNYEKTSGQMVNVTKSALNFSPNVNIELRGFLYELLVMPVVDTLGKYL------NGKRLNFLLGKGGKYAHNDSLLLAPIKANSSVFWR
        + E    + +L+ YE++SGQ +N  K++L FS N N + +  +  +    V+     YL      N   L + + K  KY  +   + A +   +S  WR
Subjt:  IEEVWAFRTLLKNYEKTSGQMVNVTKSALNFSPNVNIELRGFLYELLVMPVVDTLGKYL------NGKRLNFLLGKGGKYAHNDSLLLAPIKANSSVFWR

Query:  GFVWAKALIHACTRKMVGNGRSVKFFKDPWIPKEITFKPRATIL---ICVSNEDDKWIWHFNKNGIYSVKSDYKL
          + A+ L+    R  VG+ + +K +KD WIP   T+K    IL   + V+   D+ IW   +N  ++VK+ Y+L
Subjt:  GFVWAKALIHACTRKMVGNGRSVKFFKDPWIPKEITFKPRATIL---ICVSNEDDKWIWHFNKNGIYSVKSDYKL

XP_040372957.1 uncharacterized protein LOC121052298 [Rosa chinensis]6.4e-4131.83Show/hide
Query:  MLKIGFHSVWVDLIMDCVKTAQFSILLNGVPIGTIIPQRGFRQGDPLSPYLFLLVLEVLSAMINETVSCNRIIGLKPGKFCPSVSHLFFADDNLIFCKAS
        ML++GFH +WV  IMDC+ T  FS+L  G P+G  +P  G RQG PLSPYLFL V E  S ++ +  +  +I G++  +  PS+SHLF ADD+ +F +A+
Subjt:  MLKIGFHSVWVDLIMDCVKTAQFSILLNGVPIGTIIPQRGFRQGDPLSPYLFLLVLEVLSAMINETVSCNRIIGLKPGKFCPSVSHLFFADDNLIFCKAS

Query:  IEEVWAFRTLLKNYEKTSGQMVNVTKSALNFSPNVNIELRGFLYELLVMPVVDTLGKY---------------LNGKRLNF---------LLGK------
               + +L  YEK SGQ +N  KSAL+FSP V  E + FL   L +PVV    KY               L G  L F         LL K      
Subjt:  IEEVWAFRTLLKNYEKTSGQMVNVTKSALNFSPNVNIELRGFLYELLVMPVVDTLGKY---------------LNGKRLNF---------LLGK------

Query:  -----------GGKYAHNDSLLLAPIKANSSVFWRGFVWAKALIHACTRKMVGNGRSVKFFKDPWIPKEITFKPRA------------------------
                    G Y  + SLL A +  ++S+ WR  +W + L  +  R  VG+G  +  F+D WIP   TF+  +                        
Subjt:  -----------GGKYAHNDSLLLAPIKANSSVFWRGFVWAKALIHACTRKMVGNGRSVKFFKDPWIPKEITFKPRA------------------------

Query:  --------------TILICVSNEDDKWIWHFNKNGIYSVKSDYKLAMSLSV----GQCSTSVEIQSQWNSV-GRNAP
                      +I + ++   D+  WH+ +NG+Y+ KS Y+LA +       G+ S++ +    W  V   NAP
Subjt:  --------------TILICVSNEDDKWIWHFNKNGIYSVKSDYKLAMSLSV----GQCSTSVEIQSQWNSV-GRNAP

TrEMBL top hitse value%identityAlignment
A0A2N9E147 Reverse transcriptase domain-containing protein2.2e-4232.49Show/hide
Query:  MLKIGFHSVWVDLIMDCVKTAQFSILLNGVPIGTIIPQRGFRQGDPLSPYLFLLVLEVLSAMINETVSCNRIIGLKPGKFCPSVSHLFFADDNLIFCKAS
        MLK+GF   WVDL+M+CV T  FSILLNG P G I P RG RQGDPLSPYLFL+  E  + +I   ++   I G+   +  P  SHLFFADD+++F KAS
Subjt:  MLKIGFHSVWVDLIMDCVKTAQFSILLNGVPIGTIIPQRGFRQGDPLSPYLFLLVLEVLSAMINETVSCNRIIGLKPGKFCPSVSHLFFADDNLIFCKAS

Query:  IEEVWAFRTLLKNYEKTSGQMVNVTKSALNFSPNVNIELRGFLYELLVMPVVDTLGKYL-------NGKRLNF-----------------LLGKGGK---
        +EE    + +LK YE  SGQ +N+ K++L FS N +  ++  +   L     + L KYL         KR  F                 LL + GK   
Subjt:  IEEVWAFRTLLKNYEKTSGQMVNVTKSALNFSPNVNIELRGFLYELLVMPVVDTLGKYL-------NGKRLNF-----------------LLGKGGK---

Query:  ----------YAHN------------DSLLLAPIKANSSVFWRGFVWAKALIHACTRKMVGNGRSVKFFKDPWIPKEITFKPRATILICVSN--------
                  YA +            +S++ A +  N+S  WR  + A+ +I   TR  VGNG +++ +KD WIP   TFK ++ I I   N        
Subjt:  ----------YAHN------------DSLLLAPIKANSSVFWRGFVWAKALIHACTRKMVGNGRSVKFFKDPWIPKEITFKPRATILICVSN--------

Query:  --------------------------------EDDKWIWHFNKNGIYSVKSDYKLAMSLSVGQCSTSVEIQSQWNSVGRNAPIMDWTLRCEWISKYW
                                          D  IW   K G+YSV+S Y L M    G        +S  NS    +P ++      W  K W
Subjt:  --------------------------------EDDKWIWHFNKNGIYSVKSDYKLAMSLSVGQCSTSVEIQSQWNSVGRNAPIMDWTLRCEWISKYW

A0A2Z6MTD1 Reverse transcriptase domain-containing protein5.3e-4133.83Show/hide
Query:  MLKIGFHSVWVDLIMDCVKTAQFSILLNGVPIGTIIPQRGFRQGDPLSPYLFLLVLEVLSAMINETVSCNRIIGLKPGKFCPSVSHLFFADDNLIFCKAS
        M ++GF  VW+  +M CV +  +S+L+N   +G I P RG RQGDPLSPYLF+LV E L+A+I++ V    + G++  +  P VSHL FADD  +FC+AS
Subjt:  MLKIGFHSVWVDLIMDCVKTAQFSILLNGVPIGTIIPQRGFRQGDPLSPYLFLLVLEVLSAMINETVSCNRIIGLKPGKFCPSVSHLFFADDNLIFCKAS

Query:  IEEVWAFRTLLKNYEKTSGQMVNVTKSALNFSPNVNIELRGFLYELLVMPVVDTLG-KYLNGKRLNFLLGKGG---------------------------
        + EV     +L  YE  SGQ VN+ KS +  S N+++  +  L  +L + +V  LG  +L  +RL F    GG                           
Subjt:  IEEVWAFRTLLKNYEKTSGQMVNVTKSALNFSPNVNIELRGFLYELLVMPVVDTLG-KYLNGKRLNFLLGKGG---------------------------

Query:  --------KYAHNDSLLLAPIKANSSVFWRGFVWAKALIHACTRKMVGNGRSVKFFKDPWI----------PKEITFKPRATILICVSNEDDKWIWHFNK
                +Y    SL  AP+  N S  WR    A+ ++    R  +G+G +++   DPW+          P+    K   T L+  S  DDK +    +
Subjt:  --------KYAHNDSLLLAPIKANSSVFWRGFVWAKALIHACTRKMVGNGRSVKFFKDPWI----------PKEITFKPRATILICVSNEDDKWIWHFNK

Query:  NGIYSVKSDYKLAMSLSVGQCSTSVEIQSQWNSV
        NG YSVKS YKLAM   +G  S    +   WN +
Subjt:  NGIYSVKSDYKLAMSLSVGQCSTSVEIQSQWNSV

A0A6J1DX30 uncharacterized protein LOC1110248743.3e-5135.43Show/hide
Query:  MLKIGFHSVWVDLIMDCVKTAQFSILLNGVPIGTIIPQRGFRQGDPLSPYLFLLVLEVLSAMINETVSCNRIIGLKPGKFCPSVSHLFFADDNLIFCKAS
        M K+GF+  W+  I+ C+ T +FSI LNG P G   P RG RQGDPLSPYLFLL  E LSA+IN   +  R+ G+   +   S++HL FADD+LIF ++ 
Subjt:  MLKIGFHSVWVDLIMDCVKTAQFSILLNGVPIGTIIPQRGFRQGDPLSPYLFLLVLEVLSAMINETVSCNRIIGLKPGKFCPSVSHLFFADDNLIFCKAS

Query:  IEEVWAFRTLLKNYEKTSGQMVNVTKSALNFSPNVNIELRGFLYELLVMPVVDTLGKYL-----------NGKRL-------------------------
          E  A R LL +Y + SGQ +N +KSAL FSPNV+ E + +L  +L + +V   G YL             ++L                         
Subjt:  IEEVWAFRTLLKNYEKTSGQMVNVTKSALNFSPNVNIELRGFLYELLVMPVVDTLGKYL-----------NGKRL-------------------------

Query:  ----------------NFLLGK--GGKYAHNDSLLLAPIKANSSVFWRGFVWAKALIHACTRKMVGNGRSVKFFKDPWIPKEITFKP-------------
                        N L+ K    KY  + SLL A   + SS FW+GF+W + L+    R  VGNG ++K F DPW+P+  TFKP             
Subjt:  ----------------NFLLGK--GGKYAHNDSLLLAPIKANSSVFWRGFVWAKALIHACTRKMVGNGRSVKFFKDPWIPKEITFKP-------------

Query:  ----------------------RATIL---ICVSNEDDKWIWHFNKNGIYSVKSDYKLAMSLSVGQCSTSVEIQ-SQWNSV
                              R  IL   I   N  D W+WH++K G YSV+S YKL M L     S S   + +QWNS+
Subjt:  ----------------------RATIL---ICVSNEDDKWIWHFNKNGIYSVKSDYKLAMSLSVGQCSTSVEIQ-SQWNSV

A0A803NG99 Uncharacterized protein2.0e-4028.29Show/hide
Query:  MLKIGFHSVWVDLIMDCVKTAQFSILLNGVPIGTIIPQRGFRQGDPLSPYLFLLVLEVLSAMINETVSCNRIIGLKPGKFCPSVSHLFFADDNLIFCKAS
        M K+GF+  W+ LIM+C+ T  FS L+NG   G+++PQRG RQGDPLSPYLFL+  E LS ++    +  R+ GL   +  P+++HL FADD+L+FC+A+
Subjt:  MLKIGFHSVWVDLIMDCVKTAQFSILLNGVPIGTIIPQRGFRQGDPLSPYLFLLVLEVLSAMINETVSCNRIIGLKPGKFCPSVSHLFFADDNLIFCKAS

Query:  IEEVWAFRTLLKNYEKTSGQMVNVTKSALNFSPNVNIELRGFLYELLVMPVVDTLGKYL-----------------------------------------
             A +  L  Y + SGQ++N  KS ++FSPN   E++    ++L MP+ D   KYL                                         
Subjt:  IEEVWAFRTLLKNYEKTSGQMVNVTKSALNFSPNVNIELRGFLYELLVMPVVDTLGKYL-----------------------------------------

Query:  --------------------------------------------NGKRLNFLLG---KGGKYAHNDSLLLAPIKANSSVFWRGFVWAKALIHACTRKMVG
                                                    + K+  FL     +GG    +   L A     SS+ W+G  W K L+    R  VG
Subjt:  --------------------------------------------NGKRLNFLLG---KGGKYAHNDSLLLAPIKANSSVFWRGFVWAKALIHACTRKMVG

Query:  NGRSVKFFKDPWIPKEITFKP-RAT------------------------------------ILICVSNEDDKWIWHFNKNGIYSVKSDYKLAMSLSVGQC
        +G S++   DPWIP +  F P R T                                    I + ++ +DD +IWH+   G+Y+V+S Y LA SL+    
Subjt:  NGRSVKFFKDPWIPKEITFKP-RAT------------------------------------ILICVSNEDDKWIWHFNKNGIYSVKSDYKLAMSLSVGQC

Query:  STSVEIQSQW
        +T    Q +W
Subjt:  STSVEIQSQW

A0A803PI64 Uncharacterized protein3.7e-4232.21Show/hide
Query:  MLKIGFHSVWVDLIMDCVKTAQFSILLNGVPIGTIIPQRGFRQGDPLSPYLFLLVLEVLSAMINETVSCNRIIGLKPGKFCPSVSHLFFADDNLIFCKAS
        M ++GF   WVD IM CV +  FS L+NG   G +IP+RG RQGDPLSP+LFL   E LS++I +  S  R+ G++  +   SVSHLFFADD+L+F  A 
Subjt:  MLKIGFHSVWVDLIMDCVKTAQFSILLNGVPIGTIIPQRGFRQGDPLSPYLFLLVLEVLSAMINETVSCNRIIGLKPGKFCPSVSHLFFADDNLIFCKAS

Query:  IEEVWAFRTLLKNYEKTSGQMVNVTKSALNFSPNVNIELRGFLYELLVMPVVDTLGKYLN-----GKRLNFLL----------------------GKGG-
        ++    F+ +L  Y   SGQ+VN  KS   F  NV+ E R  L  ++ +  VD  GKYL      G+     L                       KGG 
Subjt:  IEEVWAFRTLLKNYEKTSGQMVNVTKSALNFSPNVNIELRGFLYELLVMPVVDTLGKYLN-----GKRLNFLL----------------------GKGG-

Query:  ----------------------------------KYAHNDSLLLAPIKANSSVFWRGFVWAKALIHACTRKMVGNGRSVKFFKDPWIPKEITFKP-----
                                           Y  +   L A   AN+S  WR  VW K LI    R  VGNG SV+  +DPW+P+ +TFK      
Subjt:  ----------------------------------KYAHNDSLLLAPIKANSSVFWRGFVWAKALIHACTRKMVGNGRSVKFFKDPWIPKEITFKP-----

Query:  -----------------------------RATILICVSNED----DKWIWHFNKNGIYSVKSDYKLAMSLSVGQCSTSVEIQSQW
                                      A +++ +   D    DK + H++KNG Y+VKS Y++A SL      +S     QW
Subjt:  -----------------------------RATILICVSNED----DKWIWHFNKNGIYSVKSDYKLAMSLSVGQCSTSVEIQSQW

SwissProt top hitse value%identityAlignment
O00370 LINE-1 retrotransposable element ORF2 protein3.6e-1033.6Show/hide
Query:  KIGFHSVWVDLIMDCVKTAQFSILLNGVPIGTIIPQRGFRQGDPLSPYLFLLVLEVLSAMINETVSCNRIIGLKPGKFCPSVSHLFFADDNLIFCKASIE
        K+G   +++ +I         +I+LNG  +     + G RQG PLSP LF +VLEVL+  I +      I G++ GK    V    FADD +++ +  I 
Subjt:  KIGFHSVWVDLIMDCVKTAQFSILLNGVPIGTIIPQRGFRQGDPLSPYLFLLVLEVLSAMINETVSCNRIIGLKPGKFCPSVSHLFFADDNLIFCKASIE

Query:  EVWAFRTLLKNYEKTSGQMVNVTKS
               L+ N+ K SG  +NV KS
Subjt:  EVWAFRTLLKNYEKTSGQMVNVTKS

P08548 LINE-1 reverse transcriptase homolog1.8e-0931.34Show/hide
Query:  KIGFHSVWVDLIMDCVKTAQFSILLNGVPIGTIIPQRGFRQGDPLSPYLFLLVLEVLSAMINETVSCNRIIGLKPGKFCPSVSHLFFADDNLIFCKASIE
        KIG    ++ LI         +I+LNGV + +   + G RQG PLSP LF +V+EVL+  I E      I G+  G     +    FADD +++ + + +
Subjt:  KIGFHSVWVDLIMDCVKTAQFSILLNGVPIGTIIPQRGFRQGDPLSPYLFLLVLEVLSAMINETVSCNRIIGLKPGKFCPSVSHLFFADDNLIFCKASIE

Query:  EVWAFRTLLKNYEKTSGQMVNVTKSALNFSPNVN
               ++K Y   SG  +N  KS      N N
Subjt:  EVWAFRTLLKNYEKTSGQMVNVTKSALNFSPNVN

P11369 LINE-1 retrotransposable element ORF2 protein2.4e-0628.39Show/hide
Query:  GFHSVWVDLIMDCVKTAQFSILLNGVPIGTIIPQRGFRQGDPLSPYLFLLVLEVLSAMINETVSCNRIIGLKPGKFCPSVSHLFFADDNLIFCKASIEEV
        G    ++++I         +I +NG  +  I  + G RQG PLSPYLF +VLEVL+  I +      I G++ GK    +S L  ADD +++        
Subjt:  GFHSVWVDLIMDCVKTAQFSILLNGVPIGTIIPQRGFRQGDPLSPYLFLLVLEVLSAMINETVSCNRIIGLKPGKFCPSVSHLFFADDNLIFCKASIEEV

Query:  WAFRTLLKNYEKTSGQMVNVTKSALNFSPNVNIELRGFLYELLVMPVVDTLGKYL
             L+ ++ +  G  +N  KS + F    N +    + E     +V    KYL
Subjt:  WAFRTLLKNYEKTSGQMVNVTKSALNFSPNVNIELRGFLYELLVMPVVDTLGKYL

P92555 Uncharacterized mitochondrial protein AtMg012503.8e-1247.76Show/hide
Query:  LLNGVPIGTIIPQRGFRQGDPLSPYLFLLVLEVLSAMINETVSCNRIIGLKPGKFCPSVSHLFFADD
        ++NG P G + P RG RQGDPLSPYLF+L  EVLS +        R+ G++     P ++HL FADD
Subjt:  LLNGVPIGTIIPQRGFRQGDPLSPYLFLLVLEVLSAMINETVSCNRIIGLKPGKFCPSVSHLFFADD

Q05118 Retrovirus-related Pol polyprotein from type-1 retrotransposable element R2 (Fragment)4.5e-0530.47Show/hide
Query:  MLKIGFHSVWVDLIMDCVKTAQFSILLNGVPIGTIIPQRGFRQGDPLSPYLFLLVLEVLSAMINETVSCNRIIGLKPGKFCPSVSHLFFADDNLIFCKAS
        M   G      D IM  +  A  +I++ G     I  + G +QGDPLSP LF +VL+ L   +N+        G      C  ++ L FADD L+     
Subjt:  MLKIGFHSVWVDLIMDCVKTAQFSILLNGVPIGTIIPQRGFRQGDPLSPYLFLLVLEVLSAMINETVSCNRIIGLKPGKFCPSVSHLFFADDNLIFCKAS

Query:  IEEVWAFRTLLKNYEKTSGQMVNVTKSA
        I+   +  T    Y +T G  +N  K A
Subjt:  IEEVWAFRTLLKNYEKTSGQMVNVTKSA

Arabidopsis top hitse value%identityAlignment
ATMG01250.1 RNA-directed DNA polymerase (reverse transcriptase)2.7e-1347.76Show/hide
Query:  LLNGVPIGTIIPQRGFRQGDPLSPYLFLLVLEVLSAMINETVSCNRIIGLKPGKFCPSVSHLFFADD
        ++NG P G + P RG RQGDPLSPYLF+L  EVLS +        R+ G++     P ++HL FADD
Subjt:  LLNGVPIGTIIPQRGFRQGDPLSPYLFLLVLEVLSAMINETVSCNRIIGLKPGKFCPSVSHLFFADD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTAAAGATTGGGTTTCATTCTGTGTGGGTGGATTTGATCATGGATTGTGTGAAAACTGCACAATTCTCTATTCTTCTTAATGGGGTGCCCATAGGAACCATCATTCC
CCAACGCGGGTTCCGTCAGGGTGACCCATTATCTCCATATTTATTCCTTCTGGTTTTGGAGGTTTTATCTGCAATGATTAACGAGACGGTATCATGCAATCGGATCATAG
GTTTGAAGCCAGGAAAATTTTGTCCATCTGTTTCTCATTTGTTTTTCGCTGATGACAACCTTATTTTCTGTAAAGCATCAATAGAAGAAGTTTGGGCTTTTCGAACTTTG
TTGAAAAATTATGAGAAGACTTCGGGGCAAATGGTAAATGTCACCAAGTCAGCTTTGAATTTTTCACCCAATGTTAACATAGAACTGCGTGGTTTTCTTTATGAACTTCT
TGTTATGCCTGTTGTTGATACTCTAGGGAAATATTTGAATGGAAAGAGACTCAATTTTCTGTTGGGGAAAGGAGGTAAATATGCTCACAATGACTCTCTTCTATTGGCTC
CAATCAAGGCTAATTCCTCGGTGTTCTGGAGGGGTTTTGTATGGGCGAAAGCTCTTATTCATGCATGTACAAGGAAAATGGTTGGTAATGGGAGGTCTGTTAAGTTCTTT
AAGGATCCTTGGATCCCGAAGGAGATAACTTTCAAACCACGAGCAACTATCCTCATTTGTGTATCAAATGAGGATGACAAATGGATTTGGCATTTCAACAAGAATGGGAT
CTACTCAGTTAAAAGTGATTATAAACTTGCCATGAGTTTAAGTGTGGGACAGTGTTCTACGAGTGTTGAGATTCAGAGTCAATGGAACAGTGTTGGTAGAAATGCTCCCA
TTATGGATTGGACACTTCGATGTGAATGGATCAGCAAATATTGGGAAGAAACAAGACCAACAACAAAGGAAGGACCTGATGGACACTTGCAAGGCACCATGAAAAAGTTT
GATCAGGTGACTCTCCTACCATTGGCAGCAGAGATCCAAGCAATTGCTCAAGGTCTTCAGTTAATTCAACGAATGCAAATAGTGGAAGCATGTGTTTATTCTGACTTCCT
CAGCACTATTAACATTATCAAAGGGGAGCAAGAAATTTTGTCTGATGTCTATCATTGGATAATGCAAATTCATGATCTGAGCAAGAGCTTCAGGAACTCACCTGACCTTC
TCGTGCCACCAACGGTAAATTTGTTTGTGAGGGGGGAAGACTTGGCCTACAAGACAGGGAACCTACACACCGATGTGGTGCTTGCCACACCGCCTCCGATGCTTCAGTCA
GAAAACGGAAGGAGGAGAGCAAGAGAGCAAGAGAGCAAGAGGGAATTCAAAGGCGTTTCGAGACGAACCAGGCGAAACCGGGCCGACCAGAGGCAGCAGGAACTCGGCCA
GTGCAAGCGGGCCGAGTGGTCGGCCTCGGCCTTGGGGTCGGGCCAAAAGCCTGATCCCTTCGACTTTGGCTCTGTAACGCCCGGGAAGCCATCAAGCCATCTTTCTCCTT
CTTCCTTCCCTCTCTTTAACCCACGACCGCAGCCCCCATCCCCTTCTTCTTCTTCGATTTTGAGCAGCCAGTTTCACCTCCCTCCACGACTCCTCCACCGGCGAGCTTGG
ACCACGGCGGCGCACGCTTCTCTGTCAGGTTTCGTGACGGCAGTAACTTCTGTTGGGTTTTATGCCCTAAAACTCGTAGATAGTGAATGTAACCGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTAAAGATTGGGTTTCATTCTGTGTGGGTGGATTTGATCATGGATTGTGTGAAAACTGCACAATTCTCTATTCTTCTTAATGGGGTGCCCATAGGAACCATCATTCC
CCAACGCGGGTTCCGTCAGGGTGACCCATTATCTCCATATTTATTCCTTCTGGTTTTGGAGGTTTTATCTGCAATGATTAACGAGACGGTATCATGCAATCGGATCATAG
GTTTGAAGCCAGGAAAATTTTGTCCATCTGTTTCTCATTTGTTTTTCGCTGATGACAACCTTATTTTCTGTAAAGCATCAATAGAAGAAGTTTGGGCTTTTCGAACTTTG
TTGAAAAATTATGAGAAGACTTCGGGGCAAATGGTAAATGTCACCAAGTCAGCTTTGAATTTTTCACCCAATGTTAACATAGAACTGCGTGGTTTTCTTTATGAACTTCT
TGTTATGCCTGTTGTTGATACTCTAGGGAAATATTTGAATGGAAAGAGACTCAATTTTCTGTTGGGGAAAGGAGGTAAATATGCTCACAATGACTCTCTTCTATTGGCTC
CAATCAAGGCTAATTCCTCGGTGTTCTGGAGGGGTTTTGTATGGGCGAAAGCTCTTATTCATGCATGTACAAGGAAAATGGTTGGTAATGGGAGGTCTGTTAAGTTCTTT
AAGGATCCTTGGATCCCGAAGGAGATAACTTTCAAACCACGAGCAACTATCCTCATTTGTGTATCAAATGAGGATGACAAATGGATTTGGCATTTCAACAAGAATGGGAT
CTACTCAGTTAAAAGTGATTATAAACTTGCCATGAGTTTAAGTGTGGGACAGTGTTCTACGAGTGTTGAGATTCAGAGTCAATGGAACAGTGTTGGTAGAAATGCTCCCA
TTATGGATTGGACACTTCGATGTGAATGGATCAGCAAATATTGGGAAGAAACAAGACCAACAACAAAGGAAGGACCTGATGGACACTTGCAAGGCACCATGAAAAAGTTT
GATCAGGTGACTCTCCTACCATTGGCAGCAGAGATCCAAGCAATTGCTCAAGGTCTTCAGTTAATTCAACGAATGCAAATAGTGGAAGCATGTGTTTATTCTGACTTCCT
CAGCACTATTAACATTATCAAAGGGGAGCAAGAAATTTTGTCTGATGTCTATCATTGGATAATGCAAATTCATGATCTGAGCAAGAGCTTCAGGAACTCACCTGACCTTC
TCGTGCCACCAACGGTAAATTTGTTTGTGAGGGGGGAAGACTTGGCCTACAAGACAGGGAACCTACACACCGATGTGGTGCTTGCCACACCGCCTCCGATGCTTCAGTCA
GAAAACGGAAGGAGGAGAGCAAGAGAGCAAGAGAGCAAGAGGGAATTCAAAGGCGTTTCGAGACGAACCAGGCGAAACCGGGCCGACCAGAGGCAGCAGGAACTCGGCCA
GTGCAAGCGGGCCGAGTGGTCGGCCTCGGCCTTGGGGTCGGGCCAAAAGCCTGATCCCTTCGACTTTGGCTCTGTAACGCCCGGGAAGCCATCAAGCCATCTTTCTCCTT
CTTCCTTCCCTCTCTTTAACCCACGACCGCAGCCCCCATCCCCTTCTTCTTCTTCGATTTTGAGCAGCCAGTTTCACCTCCCTCCACGACTCCTCCACCGGCGAGCTTGG
ACCACGGCGGCGCACGCTTCTCTGTCAGGTTTCGTGACGGCAGTAACTTCTGTTGGGTTTTATGCCCTAAAACTCGTAGATAGTGAATGTAACCGTTGA
Protein sequenceShow/hide protein sequence
MLKIGFHSVWVDLIMDCVKTAQFSILLNGVPIGTIIPQRGFRQGDPLSPYLFLLVLEVLSAMINETVSCNRIIGLKPGKFCPSVSHLFFADDNLIFCKASIEEVWAFRTL
LKNYEKTSGQMVNVTKSALNFSPNVNIELRGFLYELLVMPVVDTLGKYLNGKRLNFLLGKGGKYAHNDSLLLAPIKANSSVFWRGFVWAKALIHACTRKMVGNGRSVKFF
KDPWIPKEITFKPRATILICVSNEDDKWIWHFNKNGIYSVKSDYKLAMSLSVGQCSTSVEIQSQWNSVGRNAPIMDWTLRCEWISKYWEETRPTTKEGPDGHLQGTMKKF
DQVTLLPLAAEIQAIAQGLQLIQRMQIVEACVYSDFLSTINIIKGEQEILSDVYHWIMQIHDLSKSFRNSPDLLVPPTVNLFVRGEDLAYKTGNLHTDVVLATPPPMLQS
ENGRRRAREQESKREFKGVSRRTRRNRADQRQQELGQCKRAEWSASALGSGQKPDPFDFGSVTPGKPSSHLSPSSFPLFNPRPQPPSPSSSSILSSQFHLPPRLLHRRAW
TTAAHASLSGFVTAVTSVGFYALKLVDSECNR