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Lag0022260 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0022260
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr7:22346407..22346880
RNA-Seq ExpressionLag0022260
SyntenyLag0022260
Gene Ontology termsNA
InterPro domainsIPR025558 - Domain of unknown function DUF4283


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022132681.1 uncharacterized protein LOC111005481 [Momordica charantia]3.9e-2539.35Show/hide
Query:  VMGRNFKAAWNIS-NGLTVEKLGTNLFLFSLNSKEEQARILRQGPWLFDKFQLVLSKLIPLVKLTTMEFKYASLWVHFYKLPMDLHNSSMAERLGNAIGR
        V+    K AW +     +V+ +G N+FLF+ N   ++ RILR GPW FD+  +++   + L K   M+F+  SLWVHF+ L +   N +MA RLGNAIG 
Subjt:  VMGRNFKAAWNIS-NGLTVEKLGTNLFLFSLNSKEEQARILRQGPWLFDKFQLVLSKLIPLVKLTTMEFKYASLWVHFYKLPMDLHNSSMAERLGNAIGR

Query:  FKEFDNGGRGH--KESLRVRFTIDISKPLRICLKVNLDEVLGSYWSSIRYEKLPE
        F++ ++          LRVR   D+ KPL   +K+NLD  +G  W  I+YE+LP+
Subjt:  FKEFDNGGRGH--KESLRVRFTIDISKPLRICLKVNLDEVLGSYWSSIRYEKLPE

XP_022156185.1 uncharacterized protein LOC111023135 [Momordica charantia]2.9e-2842.58Show/hide
Query:  DVMGRNFKAAWNISNGLTVEKLGTNLFLFSLNSKEEQARILRQGPWLFDKFQLVLSKLIPLVKLTTMEFKYASLWVHFYKLPMDLHNSSMAERLGNAIGR
        DV+ R    AW + + LTVE +G NLFLF    + +  R+++ GPW FDK  +VL K      ++ +EF   + W+H + LPM   N +MA RLGNAIG 
Subjt:  DVMGRNFKAAWNISNGLTVEKLGTNLFLFSLNSKEEQARILRQGPWLFDKFQLVLSKLIPLVKLTTMEFKYASLWVHFYKLPMDLHNSSMAERLGNAIGR

Query:  FKEFDNGGRGHK--ESLRVRFTIDISKPLRICLKVNLDEVLGSYWSSIRYEKLPE
        F + D   +G     SLR+R  IDI+KPLR  +K+N+D  +G  W  I+YE+LP+
Subjt:  FKEFDNGGRGHK--ESLRVRFTIDISKPLRICLKVNLDEVLGSYWSSIRYEKLPE

XP_022158377.1 uncharacterized protein LOC111024874 [Momordica charantia]3.6e-2340.13Show/hide
Query:  VMGRNFKAAWNI-SNGLTVEKLGTNLFLFSLNSKEEQARILRQGPWLFDKFQLVLSKLIPLVKLTTMEFKYASLWVHFYKLPMDLHNSSMAERLGNAIGR
        VM    + AW + +N   V+ LG NLFLFS     ++ +I + GPW FD+  ++++K + L+  + ++F    +WV F+ LP+      MA RLGNA+G 
Subjt:  VMGRNFKAAWNI-SNGLTVEKLGTNLFLFSLNSKEEQARILRQGPWLFDKFQLVLSKLIPLVKLTTMEFKYASLWVHFYKLPMDLHNSSMAERLGNAIGR

Query:  FKEFD----NGGRGHKESLRVRFTIDISKPLRICLKVNLDEVLGSYWSSIRYEKLPE
        F+E D    N   G   +LRVR  +DISKPLR  +K+NLD  +G  W  I+YE+LP+
Subjt:  FKEFD----NGGRGHKESLRVRFTIDISKPLRICLKVNLDEVLGSYWSSIRYEKLPE

XP_028071384.1 uncharacterized protein LOC114273772 [Camellia sinensis]2.1e-1832.47Show/hide
Query:  DVMGRNFKAAWNISNGLTVEKLGTNLFLFSLNSKEEQARILRQGPWLFDKFQLVLSKLIPLVKLTTMEFKYASLWVHFYKLPMDLHNSSMAERLGNAIGR
        + M     + W  + G+ V  +G NLF+F      ++ RIL  GPW FDK  L+L ++ P V+ + ++  +   WVH   LP+ L N  + + +GNA+G+
Subjt:  DVMGRNFKAAWNISNGLTVEKLGTNLFLFSLNSKEEQARILRQGPWLFDKFQLVLSKLIPLVKLTTMEFKYASLWVHFYKLPMDLHNSSMAERLGNAIGR

Query:  F--KEFDNGGRGHKESLRVRFTIDISKPLRICLKVNLDEVLGSYWSSIRYEKLP
        F   ++++GG     ++ +R  +D+ KPLR  +K+ L  V    W   +YE+LP
Subjt:  F--KEFDNGGRGHKESLRVRFTIDISKPLRICLKVNLDEVLGSYWSSIRYEKLP

XP_028124075.1 uncharacterized protein LOC114321128 [Camellia sinensis]1.6e-1832.47Show/hide
Query:  DVMGRNFKAAWNISNGLTVEKLGTNLFLFSLNSKEEQARILRQGPWLFDKFQLVLSKLIPLVKLTTMEFKYASLWVHFYKLPMDLHNSSMAERLGNAIGR
        + M     + W  + G+ V  +G NLF+F      ++ R+L  GPW FDK  L+L ++ P V+ + ++      WVH   LP+ L N  + + +GNA+G+
Subjt:  DVMGRNFKAAWNISNGLTVEKLGTNLFLFSLNSKEEQARILRQGPWLFDKFQLVLSKLIPLVKLTTMEFKYASLWVHFYKLPMDLHNSSMAERLGNAIGR

Query:  F--KEFDNGGRGHKESLRVRFTIDISKPLRICLKVNLDEVLGSYWSSIRYEKLP
        F   ++++GG     ++R+R  ID+ KPLR  +K+ L       W   +YE+LP
Subjt:  F--KEFDNGGRGHKESLRVRFTIDISKPLRICLKVNLDEVLGSYWSSIRYEKLP

TrEMBL top hitse value%identityAlignment
A0A2Z6NZV1 Uncharacterized protein7.2e-1732.64Show/hide
Query:  AWNISNGLTVEKLGTNLFLFSLNSKEEQARILRQGPWLFDKFQLVLSKLIPLVKLTTMEFKYASLWVHFYKLPMDLHNSSMAERLGNAIGRFKEFD-NGG
        AW + N + V+ L  NLFLF   +K++   +LR GPW FD+  L+L ++    + + ++    + WV  Y LP  L + +MA++LGN +G F+E D    
Subjt:  AWNISNGLTVEKLGTNLFLFSLNSKEEQARILRQGPWLFDKFQLVLSKLIPLVKLTTMEFKYASLWVHFYKLPMDLHNSSMAERLGNAIGRFKEFD-NGG

Query:  RGHKESLRVRFTIDISKPLRICLKVNLDEVLGSYWSSIRYEKLP
              LR++ ++D+ KPL+   K+   +   + W   +YE+LP
Subjt:  RGHKESLRVRFTIDISKPLRICLKVNLDEVLGSYWSSIRYEKLP

A0A5C7IL40 CCHC-type domain-containing protein1.2e-1635.17Show/hide
Query:  WNISNGLTVEKLGTNLFLFSLNSKEEQARILRQGPWLFDKFQLVLSKLIPLVKLTTMEFKYASLWVHFYKLPMDLHNSSMAERLGNAIGRFKEFDNGGRG
        W  + G  +E +  N FLF   +KE+  RI   GPW FD   +VL KL  + K+  M F   S W+  +  P+      M E +G  IG   + D G  G
Subjt:  WNISNGLTVEKLGTNLFLFSLNSKEEQARILRQGPWLFDKFQLVLSKLIPLVKLTTMEFKYASLWVHFYKLPMDLHNSSMAERLGNAIGRFKEFDNGGRG

Query:  H--KESLRVRFTIDISKPLRICLKVNLDEVLGSYWSSIRYEKLPE
            + +R+R  ID+S PL+  L+V LD++       IRYEK+P+
Subjt:  H--KESLRVRFTIDISKPLRICLKVNLDEVLGSYWSSIRYEKLPE

A0A6J1BSZ1 uncharacterized protein LOC1110054811.9e-2539.35Show/hide
Query:  VMGRNFKAAWNIS-NGLTVEKLGTNLFLFSLNSKEEQARILRQGPWLFDKFQLVLSKLIPLVKLTTMEFKYASLWVHFYKLPMDLHNSSMAERLGNAIGR
        V+    K AW +     +V+ +G N+FLF+ N   ++ RILR GPW FD+  +++   + L K   M+F+  SLWVHF+ L +   N +MA RLGNAIG 
Subjt:  VMGRNFKAAWNIS-NGLTVEKLGTNLFLFSLNSKEEQARILRQGPWLFDKFQLVLSKLIPLVKLTTMEFKYASLWVHFYKLPMDLHNSSMAERLGNAIGR

Query:  FKEFDNGGRGH--KESLRVRFTIDISKPLRICLKVNLDEVLGSYWSSIRYEKLPE
        F++ ++          LRVR   D+ KPL   +K+NLD  +G  W  I+YE+LP+
Subjt:  FKEFDNGGRGH--KESLRVRFTIDISKPLRICLKVNLDEVLGSYWSSIRYEKLPE

A0A6J1DU55 uncharacterized protein LOC1110231351.4e-2842.58Show/hide
Query:  DVMGRNFKAAWNISNGLTVEKLGTNLFLFSLNSKEEQARILRQGPWLFDKFQLVLSKLIPLVKLTTMEFKYASLWVHFYKLPMDLHNSSMAERLGNAIGR
        DV+ R    AW + + LTVE +G NLFLF    + +  R+++ GPW FDK  +VL K      ++ +EF   + W+H + LPM   N +MA RLGNAIG 
Subjt:  DVMGRNFKAAWNISNGLTVEKLGTNLFLFSLNSKEEQARILRQGPWLFDKFQLVLSKLIPLVKLTTMEFKYASLWVHFYKLPMDLHNSSMAERLGNAIGR

Query:  FKEFDNGGRGHK--ESLRVRFTIDISKPLRICLKVNLDEVLGSYWSSIRYEKLPE
        F + D   +G     SLR+R  IDI+KPLR  +K+N+D  +G  W  I+YE+LP+
Subjt:  FKEFDNGGRGHK--ESLRVRFTIDISKPLRICLKVNLDEVLGSYWSSIRYEKLPE

A0A6J1DX30 uncharacterized protein LOC1110248741.8e-2340.13Show/hide
Query:  VMGRNFKAAWNI-SNGLTVEKLGTNLFLFSLNSKEEQARILRQGPWLFDKFQLVLSKLIPLVKLTTMEFKYASLWVHFYKLPMDLHNSSMAERLGNAIGR
        VM    + AW + +N   V+ LG NLFLFS     ++ +I + GPW FD+  ++++K + L+  + ++F    +WV F+ LP+      MA RLGNA+G 
Subjt:  VMGRNFKAAWNI-SNGLTVEKLGTNLFLFSLNSKEEQARILRQGPWLFDKFQLVLSKLIPLVKLTTMEFKYASLWVHFYKLPMDLHNSSMAERLGNAIGR

Query:  FKEFD----NGGRGHKESLRVRFTIDISKPLRICLKVNLDEVLGSYWSSIRYEKLPE
        F+E D    N   G   +LRVR  +DISKPLR  +K+NLD  +G  W  I+YE+LP+
Subjt:  FKEFD----NGGRGHKESLRVRFTIDISKPLRICLKVNLDEVLGSYWSSIRYEKLPE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G31430.1 unknown protein3.3e-0628.85Show/hide
Query:  FLFSLNSKEEQARILRQGPWLFDKFQLVLSKLIPLVKLTTMEFKYASLWVHFYKLPMDLHNSSMAERLGNAIGRFKEFDNGGR--GHKESLRVRFTIDIS
        F+F+L  +E    +LR+GPW F+ + ++L +  P + L    F +   WV    +P    N  + E +G A+G+  + D         +  RV    DI+
Subjt:  FLFSLNSKEEQARILRQGPWLFDKFQLVLSKLIPLVKLTTMEFKYASLWVHFYKLPMDLHNSSMAERLGNAIGRFKEFDNGGR--GHKESLRVRFTIDIS

Query:  KPLR
         PLR
Subjt:  KPLR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTGGTGATGTGATGGGGAGAAATTTTAAGGCTGCCTGGAACATTTCAAATGGTCTCACGGTAGAAAAGTTAGGAACTAATTTGTTCCTCTTTTCACTTAATTCGAA
AGAAGAACAAGCACGCATTTTAAGACAAGGCCCATGGTTATTTGATAAATTTCAGTTGGTTTTGTCCAAGCTAATCCCACTAGTCAAGCTAACGACAATGGAGTTCAAAT
ATGCATCGCTCTGGGTACATTTCTATAAACTCCCTATGGATTTACACAATTCCTCAATGGCTGAAAGATTGGGGAATGCAATTGGTCGGTTCAAGGAGTTTGACAACGGT
GGGCGGGGACACAAGGAGAGCCTTCGGGTTAGATTCACCATTGATATATCTAAACCGCTACGCATATGTCTCAAGGTAAATCTGGATGAAGTTCTCGGAAGCTACTGGTC
TTCAATCCGATACGAAAAGCTACCGGAACTATGA
mRNA sequenceShow/hide mRNA sequence
ATGGTTGGTGATGTGATGGGGAGAAATTTTAAGGCTGCCTGGAACATTTCAAATGGTCTCACGGTAGAAAAGTTAGGAACTAATTTGTTCCTCTTTTCACTTAATTCGAA
AGAAGAACAAGCACGCATTTTAAGACAAGGCCCATGGTTATTTGATAAATTTCAGTTGGTTTTGTCCAAGCTAATCCCACTAGTCAAGCTAACGACAATGGAGTTCAAAT
ATGCATCGCTCTGGGTACATTTCTATAAACTCCCTATGGATTTACACAATTCCTCAATGGCTGAAAGATTGGGGAATGCAATTGGTCGGTTCAAGGAGTTTGACAACGGT
GGGCGGGGACACAAGGAGAGCCTTCGGGTTAGATTCACCATTGATATATCTAAACCGCTACGCATATGTCTCAAGGTAAATCTGGATGAAGTTCTCGGAAGCTACTGGTC
TTCAATCCGATACGAAAAGCTACCGGAACTATGA
Protein sequenceShow/hide protein sequence
MVGDVMGRNFKAAWNISNGLTVEKLGTNLFLFSLNSKEEQARILRQGPWLFDKFQLVLSKLIPLVKLTTMEFKYASLWVHFYKLPMDLHNSSMAERLGNAIGRFKEFDNG
GRGHKESLRVRFTIDISKPLRICLKVNLDEVLGSYWSSIRYEKLPEL