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Lag0022282 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0022282
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase
Genome locationchr7:22903998..22904686
RNA-Seq ExpressionLag0022282
SyntenyLag0022282
Gene Ontology termsGO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022155925.1 uncharacterized protein LOC111022925 [Momordica charantia]1.2e-2356.99Show/hide
Query:  KESKFIRDFQRYGPPSFDERSKNPLAVRRLIGNLEPKYDYMKCDDCLKVRGMVFILSDEARNWWKSVAASKDHTNEPVLWERFKDLLYDYYFP
        +E +FIRDF+R+GPP F+  S+ P A    +  LE  Y Y+ C D  KVRG VF+L  EA NWW+SVAA++DH N PV W RFKDLLY+YYFP
Subjt:  KESKFIRDFQRYGPPSFDERSKNPLAVRRLIGNLEPKYDYMKCDDCLKVRGMVFILSDEARNWWKSVAASKDHTNEPVLWERFKDLLYDYYFP

XP_022156330.1 uncharacterized protein LOC111023250 [Momordica charantia]6.8e-2450.46Show/hide
Query:  LQPPKLFLSNWAPEDSKESKFIRDFQRYGPPSFDERSKNPLAVRRLIGNLEPKYDYMKCDDCLKVRGMVFILSDEARNWWKSVAASKDHTNEPVLWERFK
        L PP+ F +        E++FI+DF+RYGPP+FD  SK        +  LE  Y Y+ C+D  KV+G VF+L  +A NWW SVAA++DH N PV W RFK
Subjt:  LQPPKLFLSNWAPEDSKESKFIRDFQRYGPPSFDERSKNPLAVRRLIGNLEPKYDYMKCDDCLKVRGMVFILSDEARNWWKSVAASKDHTNEPVLWERFK

Query:  DLLYDYYFP
        DLLYDYY+P
Subjt:  DLLYDYYFP

XP_022157413.1 uncharacterized protein LOC111024114 [Momordica charantia]3.0e-2457.73Show/hide
Query:  PEDSKESKFIRDFQRYGPPSFDERSKNPLAVRRLIGNLEPKYDYMKCDDCLKVRGMVFILSDEARNWWKSVAASKDHTNEPVLWERFKDLLYDYYFP
        P+D  E +FIRDF+R+GPP F+  S+ P A    +  LE  Y Y+ C D  KVRG VF+L  EA NWW+SVAA++DHTN PV W RFKDLLY+YYFP
Subjt:  PEDSKESKFIRDFQRYGPPSFDERSKNPLAVRRLIGNLEPKYDYMKCDDCLKVRGMVFILSDEARNWWKSVAASKDHTNEPVLWERFKDLLYDYYFP

XP_022158749.1 uncharacterized protein LOC111025213 [Momordica charantia]1.5e-2355.43Show/hide
Query:  ESKFIRDFQRYGPPSFDERSKNPLAVRRLIGNLEPKYDYMKCDDCLKVRGMVFILSDEARNWWKSVAASKDHTNEPVLWERFKDLLYDYYFP
        E++FI+DF+RYGPP+FD  S+   A    I  LE  Y Y+ C+D  KV+G VF+L  EA NWW SVAA++DH N P+ W RFK+LLYDYY+P
Subjt:  ESKFIRDFQRYGPPSFDERSKNPLAVRRLIGNLEPKYDYMKCDDCLKVRGMVFILSDEARNWWKSVAASKDHTNEPVLWERFKDLLYDYYFP

XP_022159311.1 uncharacterized protein LOC111025720, partial [Momordica charantia]1.2e-2358.06Show/hide
Query:  KESKFIRDFQRYGPPSFDERSKNPLAVRRLIGNLEPKYDYMKCDDCLKVRGMVFILSDEARNWWKSVAASKDHTNEPVLWERFKDLLYDYYFP
        +E +FIRDF+R+GPP F+  S+ P AV   +  LE  Y Y+ C D  KVRG VF+L  EA NWW+SVAA++DH N PV W RFKDLLY YYFP
Subjt:  KESKFIRDFQRYGPPSFDERSKNPLAVRRLIGNLEPKYDYMKCDDCLKVRGMVFILSDEARNWWKSVAASKDHTNEPVLWERFKDLLYDYYFP

TrEMBL top hitse value%identityAlignment
A0A6J1DNV8 uncharacterized protein LOC1110229255.6e-2456.99Show/hide
Query:  KESKFIRDFQRYGPPSFDERSKNPLAVRRLIGNLEPKYDYMKCDDCLKVRGMVFILSDEARNWWKSVAASKDHTNEPVLWERFKDLLYDYYFP
        +E +FIRDF+R+GPP F+  S+ P A    +  LE  Y Y+ C D  KVRG VF+L  EA NWW+SVAA++DH N PV W RFKDLLY+YYFP
Subjt:  KESKFIRDFQRYGPPSFDERSKNPLAVRRLIGNLEPKYDYMKCDDCLKVRGMVFILSDEARNWWKSVAASKDHTNEPVLWERFKDLLYDYYFP

A0A6J1DQ01 uncharacterized protein LOC1110232503.3e-2450.46Show/hide
Query:  LQPPKLFLSNWAPEDSKESKFIRDFQRYGPPSFDERSKNPLAVRRLIGNLEPKYDYMKCDDCLKVRGMVFILSDEARNWWKSVAASKDHTNEPVLWERFK
        L PP+ F +        E++FI+DF+RYGPP+FD  SK        +  LE  Y Y+ C+D  KV+G VF+L  +A NWW SVAA++DH N PV W RFK
Subjt:  LQPPKLFLSNWAPEDSKESKFIRDFQRYGPPSFDERSKNPLAVRRLIGNLEPKYDYMKCDDCLKVRGMVFILSDEARNWWKSVAASKDHTNEPVLWERFK

Query:  DLLYDYYFP
        DLLYDYY+P
Subjt:  DLLYDYYFP

A0A6J1DTA8 uncharacterized protein LOC1110241141.5e-2457.73Show/hide
Query:  PEDSKESKFIRDFQRYGPPSFDERSKNPLAVRRLIGNLEPKYDYMKCDDCLKVRGMVFILSDEARNWWKSVAASKDHTNEPVLWERFKDLLYDYYFP
        P+D  E +FIRDF+R+GPP F+  S+ P A    +  LE  Y Y+ C D  KVRG VF+L  EA NWW+SVAA++DHTN PV W RFKDLLY+YYFP
Subjt:  PEDSKESKFIRDFQRYGPPSFDERSKNPLAVRRLIGNLEPKYDYMKCDDCLKVRGMVFILSDEARNWWKSVAASKDHTNEPVLWERFKDLLYDYYFP

A0A6J1E0B4 uncharacterized protein LOC1110252137.3e-2455.43Show/hide
Query:  ESKFIRDFQRYGPPSFDERSKNPLAVRRLIGNLEPKYDYMKCDDCLKVRGMVFILSDEARNWWKSVAASKDHTNEPVLWERFKDLLYDYYFP
        E++FI+DF+RYGPP+FD  S+   A    I  LE  Y Y+ C+D  KV+G VF+L  EA NWW SVAA++DH N P+ W RFK+LLYDYY+P
Subjt:  ESKFIRDFQRYGPPSFDERSKNPLAVRRLIGNLEPKYDYMKCDDCLKVRGMVFILSDEARNWWKSVAASKDHTNEPVLWERFKDLLYDYYFP

A0A6J1E3J2 uncharacterized protein LOC1110257205.6e-2458.06Show/hide
Query:  KESKFIRDFQRYGPPSFDERSKNPLAVRRLIGNLEPKYDYMKCDDCLKVRGMVFILSDEARNWWKSVAASKDHTNEPVLWERFKDLLYDYYFP
        +E +FIRDF+R+GPP F+  S+ P AV   +  LE  Y Y+ C D  KVRG VF+L  EA NWW+SVAA++DH N PV W RFKDLLY YYFP
Subjt:  KESKFIRDFQRYGPPSFDERSKNPLAVRRLIGNLEPKYDYMKCDDCLKVRGMVFILSDEARNWWKSVAASKDHTNEPVLWERFKDLLYDYYFP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGCCTAGACTCAGGTTGGAGCTTGTATCCTTGTTTATAATCCATTCTTTGACCTTAGTACCTCATCTTCGCAGTCGATGGCTCGTGGTCATGGTTGGAGTCAGGGT
CGTGGTCGTGGACCCAGAATTCCAGCTAATAGGCAGGAGGATCAAGCAGACAATATCAATGCTCAACATGAGACTAATCTACCGATCACTCCTGATTAGCACGGAGTTGA
CCCTCCACCCCCTCCAGCCCCCCAAGCTCTTCCTTTCGAATTGGGCACCTGAGGATTCGAAAGAGTCCAAATTCATTCGCGATTTCCAGCGGTATGGCCCTCCCTCCTTT
GATGAGCGTTCAAAGAACCCGTTGGCAGTCAGACGCTTGATTGGTAACCTCGAACCCAAGTATGACTATATGAAATGTGATGACTGCCTAAAAGTTCGAGGCATGGTCTT
TATTTTGAGTGACGAAGCCCGTAATTGGTGGAAGTCTGTAGCAGCATCCAAGGATCACACTAATGAACCAGTTTTATGGGAGAGGTTTAAAGATCTTCTTTACGACTATT
ATTTCCCCTCGAAACGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTGCCTAGACTCAGGTTGGAGCTTGTATCCTTGTTTATAATCCATTCTTTGACCTTAGTACCTCATCTTCGCAGTCGATGGCTCGTGGTCATGGTTGGAGTCAGGGT
CGTGGTCGTGGACCCAGAATTCCAGCTAATAGGCAGGAGGATCAAGCAGACAATATCAATGCTCAACATGAGACTAATCTACCGATCACTCCTGATTAGCACGGAGTTGA
CCCTCCACCCCCTCCAGCCCCCCAAGCTCTTCCTTTCGAATTGGGCACCTGAGGATTCGAAAGAGTCCAAATTCATTCGCGATTTCCAGCGGTATGGCCCTCCCTCCTTT
GATGAGCGTTCAAAGAACCCGTTGGCAGTCAGACGCTTGATTGGTAACCTCGAACCCAAGTATGACTATATGAAATGTGATGACTGCCTAAAAGTTCGAGGCATGGTCTT
TATTTTGAGTGACGAAGCCCGTAATTGGTGGAAGTCTGTAGCAGCATCCAAGGATCACACTAATGAACCAGTTTTATGGGAGAGGTTTAAAGATCTTCTTTACGACTATT
ATTTCCCCTCGAAACGGTAA
Protein sequenceShow/hide protein sequence
MLPRLRLELVSLFIIHSLTLVPHLRSRWLVVMVGVRVVVVDPEFQLIGRRIKQTISMLNMRLIYRSLLISTELTLHPLQPPKLFLSNWAPEDSKESKFIRDFQRYGPPSF
DERSKNPLAVRRLIGNLEPKYDYMKCDDCLKVRGMVFILSDEARNWWKSVAASKDHTNEPVLWERFKDLLYDYYFPSKR