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Lag0022285 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0022285
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description60S ribosomal protein L13
Genome locationchr7:22993565..22995222
RNA-Seq ExpressionLag0022285
SyntenyLag0022285
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR001380 - Ribosomal protein L13e
IPR018256 - Ribosomal protein L13e, conserved site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022141234.1 60S ribosomal protein L13-1 [Momordica charantia]1.2e-3275.26Show/hide
Query:  MKH-NFIPSGHFRKHWQSYVRTWFNQPVMETRRRNVHQEKAVKNLPRSTAGPPRPIVHGQTLKYNMKVRAGRGFSFQELKATGDCMRVARQIDFEVD
        MKH N IPSGHFRKHWQ+YVRTWFNQP  +TRRRN  QEKAVKN PR TAGP RPIVHGQTLKYNMKVRAGRGFS +ELKA G   ++A  I   VD
Subjt:  MKH-NFIPSGHFRKHWQSYVRTWFNQPVMETRRRNVHQEKAVKNLPRSTAGPPRPIVHGQTLKYNMKVRAGRGFSFQELKATGDCMRVARQIDFEVD

XP_022923040.1 60S ribosomal protein L13-1 [Cucurbita moschata]9.1e-3375.26Show/hide
Query:  MKH-NFIPSGHFRKHWQSYVRTWFNQPVMETRRRNVHQEKAVKNLPRSTAGPPRPIVHGQTLKYNMKVRAGRGFSFQELKATGDCMRVARQIDFEVD
        MKH N IPSGHFRKHWQ+YVRTWFNQP  +TRRRN  QEKAVKN PR TAGP RPIVHGQTLKYNMKVRAGRGFS +ELKA G   ++A  I   VD
Subjt:  MKH-NFIPSGHFRKHWQSYVRTWFNQPVMETRRRNVHQEKAVKNLPRSTAGPPRPIVHGQTLKYNMKVRAGRGFSFQELKATGDCMRVARQIDFEVD

XP_022969755.1 60S ribosomal protein L13-3-like [Cucurbita maxima]7.0e-3376.29Show/hide
Query:  MKH-NFIPSGHFRKHWQSYVRTWFNQPVMETRRRNVHQEKAVKNLPRSTAGPPRPIVHGQTLKYNMKVRAGRGFSFQELKATGDCMRVARQIDFEVD
        MKH N IPSGHFRKHWQ+YVRTWFNQP  +TRRRNV QEKAVKN PR TAGP RPIVHGQTLKYNMKVRAGRGFS +ELKA G   + A  I   VD
Subjt:  MKH-NFIPSGHFRKHWQSYVRTWFNQPVMETRRRNVHQEKAVKNLPRSTAGPPRPIVHGQTLKYNMKVRAGRGFSFQELKATGDCMRVARQIDFEVD

XP_022990054.1 60S ribosomal protein L13-1-like [Cucurbita maxima]1.2e-3275.26Show/hide
Query:  MKH-NFIPSGHFRKHWQSYVRTWFNQPVMETRRRNVHQEKAVKNLPRSTAGPPRPIVHGQTLKYNMKVRAGRGFSFQELKATGDCMRVARQIDFEVD
        MKH N IPSGHFRKHWQ+YVRTWFNQP  +TRRRN  QEKAVKN PR TAGP RPIVHGQTLKYNMKVRAGRGFS +ELKA G   ++A  I   VD
Subjt:  MKH-NFIPSGHFRKHWQSYVRTWFNQPVMETRRRNVHQEKAVKNLPRSTAGPPRPIVHGQTLKYNMKVRAGRGFSFQELKATGDCMRVARQIDFEVD

XP_038878048.1 60S ribosomal protein L13-3 [Benincasa hispida]1.8e-3376.29Show/hide
Query:  MKH-NFIPSGHFRKHWQSYVRTWFNQPVMETRRRNVHQEKAVKNLPRSTAGPPRPIVHGQTLKYNMKVRAGRGFSFQELKATGDCMRVARQIDFEVD
        MKH N IPSGHFRKHWQ+YVRTWFNQP  +TRRRN  QEKAVKN PR TAGP RPIVHGQTLKYNMKVRAGRGFS +ELKA G   ++AR I   VD
Subjt:  MKH-NFIPSGHFRKHWQSYVRTWFNQPVMETRRRNVHQEKAVKNLPRSTAGPPRPIVHGQTLKYNMKVRAGRGFSFQELKATGDCMRVARQIDFEVD

TrEMBL top hitse value%identityAlignment
A0A6J1E5R8 60S ribosomal protein L134.4e-3375.26Show/hide
Query:  MKH-NFIPSGHFRKHWQSYVRTWFNQPVMETRRRNVHQEKAVKNLPRSTAGPPRPIVHGQTLKYNMKVRAGRGFSFQELKATGDCMRVARQIDFEVD
        MKH N IPSGHFRKHWQ+YVRTWFNQP  +TRRRN  QEKAVKN PR TAGP RPIVHGQTLKYNMKVRAGRGFS +ELKA G   ++A  I   VD
Subjt:  MKH-NFIPSGHFRKHWQSYVRTWFNQPVMETRRRNVHQEKAVKNLPRSTAGPPRPIVHGQTLKYNMKVRAGRGFSFQELKATGDCMRVARQIDFEVD

A0A6J1FUT5 60S ribosomal protein L135.8e-3375.26Show/hide
Query:  MKH-NFIPSGHFRKHWQSYVRTWFNQPVMETRRRNVHQEKAVKNLPRSTAGPPRPIVHGQTLKYNMKVRAGRGFSFQELKATGDCMRVARQIDFEVD
        MKH N IPSGHFRKHWQ+YVRTWFNQP  +TRRRN  QEKAVKN PR TAGP RPIVHGQTLKYNMKVRAGRGFS +ELKA G   ++A  I   VD
Subjt:  MKH-NFIPSGHFRKHWQSYVRTWFNQPVMETRRRNVHQEKAVKNLPRSTAGPPRPIVHGQTLKYNMKVRAGRGFSFQELKATGDCMRVARQIDFEVD

A0A6J1I0U7 60S ribosomal protein L133.4e-3376.29Show/hide
Query:  MKH-NFIPSGHFRKHWQSYVRTWFNQPVMETRRRNVHQEKAVKNLPRSTAGPPRPIVHGQTLKYNMKVRAGRGFSFQELKATGDCMRVARQIDFEVD
        MKH N IPSGHFRKHWQ+YVRTWFNQP  +TRRRNV QEKAVKN PR TAGP RPIVHGQTLKYNMKVRAGRGFS +ELKA G   + A  I   VD
Subjt:  MKH-NFIPSGHFRKHWQSYVRTWFNQPVMETRRRNVHQEKAVKNLPRSTAGPPRPIVHGQTLKYNMKVRAGRGFSFQELKATGDCMRVARQIDFEVD

A0A6J1J2K7 60S ribosomal protein L135.8e-3375.26Show/hide
Query:  MKH-NFIPSGHFRKHWQSYVRTWFNQPVMETRRRNVHQEKAVKNLPRSTAGPPRPIVHGQTLKYNMKVRAGRGFSFQELKATGDCMRVARQIDFEVD
        MKH N IPSGHFRKHWQ+YVRTWFNQP  +TRRRN  QEKAVKN PR TAGP RPIVHGQTLKYNMKVRAGRGFS +ELKA G   ++A  I   VD
Subjt:  MKH-NFIPSGHFRKHWQSYVRTWFNQPVMETRRRNVHQEKAVKNLPRSTAGPPRPIVHGQTLKYNMKVRAGRGFSFQELKATGDCMRVARQIDFEVD

A0A6J1JSD3 60S ribosomal protein L135.8e-3375.26Show/hide
Query:  MKH-NFIPSGHFRKHWQSYVRTWFNQPVMETRRRNVHQEKAVKNLPRSTAGPPRPIVHGQTLKYNMKVRAGRGFSFQELKATGDCMRVARQIDFEVD
        MKH N IPSGHFRKHWQ+YVRTWFNQP  +TRRRN  QEKAVKN PR TAGP RPIVHGQTLKYNMKVRAGRGFS +ELKA G   ++A  I   VD
Subjt:  MKH-NFIPSGHFRKHWQSYVRTWFNQPVMETRRRNVHQEKAVKNLPRSTAGPPRPIVHGQTLKYNMKVRAGRGFSFQELKATGDCMRVARQIDFEVD

SwissProt top hitse value%identityAlignment
P41127 60S ribosomal protein L13-12.6e-3063.92Show/hide
Query:  MKH-NFIPSGHFRKHWQSYVRTWFNQPVMETRRRNVHQEKAVKNLPRSTAGPPRPIVHGQTLKYNMKVRAGRGFSFQELKATGDCMRVARQIDFEVD
        MKH N IP+GHF+KHWQ+YV+TWFNQP  +TRRR   Q+KAVK  PR T+GP RP+VHGQTLKYNMKVR G+GF+ +ELKA G   ++A  I   VD
Subjt:  MKH-NFIPSGHFRKHWQSYVRTWFNQPVMETRRRNVHQEKAVKNLPRSTAGPPRPIVHGQTLKYNMKVRAGRGFSFQELKATGDCMRVARQIDFEVD

P41128 60S ribosomal protein L13-12.6e-3063.92Show/hide
Query:  MKH-NFIPSGHFRKHWQSYVRTWFNQPVMETRRRNVHQEKAVKNLPRSTAGPPRPIVHGQTLKYNMKVRAGRGFSFQELKATGDCMRVARQIDFEVD
        MKH N IP+GHF+KHWQ+YV+TWFNQP  +TRRR   Q+KAVK  PR TAGP RP+VHGQTLKYNMKVR G+GF+ +ELK+ G   ++A  I   VD
Subjt:  MKH-NFIPSGHFRKHWQSYVRTWFNQPVMETRRRNVHQEKAVKNLPRSTAGPPRPIVHGQTLKYNMKVRAGRGFSFQELKATGDCMRVARQIDFEVD

P41129 60S ribosomal protein L13-22.0e-3063.92Show/hide
Query:  MKH-NFIPSGHFRKHWQSYVRTWFNQPVMETRRRNVHQEKAVKNLPRSTAGPPRPIVHGQTLKYNMKVRAGRGFSFQELKATGDCMRVARQIDFEVD
        MKH N IP+GHF+KHWQ+YV+TWFNQP  +TRRR   Q+KAVK  PR TAGP RP+VHGQTLKYNMKVR G+GF+ +ELKA G   ++A  I   +D
Subjt:  MKH-NFIPSGHFRKHWQSYVRTWFNQPVMETRRRNVHQEKAVKNLPRSTAGPPRPIVHGQTLKYNMKVRAGRGFSFQELKATGDCMRVARQIDFEVD

P49627 60S ribosomal protein L137.0e-2866.29Show/hide
Query:  SGHFRKHWQSYVRTWFNQPVMETRRRNVHQEKAVKNLPRSTAGPPRPIVHGQTLKYNMKVRAGRGFSFQELKATGDCMRVARQIDFEVD
        +GHF+KHWQ+YV+TWFNQP  +TRRR   Q+KAVK  PR TAG  RPIVHGQTLKYNMKVR+GRGFS +ELKA G   ++A  I   VD
Subjt:  SGHFRKHWQSYVRTWFNQPVMETRRRNVHQEKAVKNLPRSTAGPPRPIVHGQTLKYNMKVRAGRGFSFQELKATGDCMRVARQIDFEVD

Q9FF90 60S ribosomal protein L13-32.0e-3064.95Show/hide
Query:  MKH-NFIPSGHFRKHWQSYVRTWFNQPVMETRRRNVHQEKAVKNLPRSTAGPPRPIVHGQTLKYNMKVRAGRGFSFQELKATGDCMRVARQIDFEVD
        MKH N IPS HFRKHWQ+YV+TWFNQP  +TRRR   Q+KAVK  PR T+GP RP+VHGQTLKYNMKVRAG+GF+ +ELK  G   ++A  I   VD
Subjt:  MKH-NFIPSGHFRKHWQSYVRTWFNQPVMETRRRNVHQEKAVKNLPRSTAGPPRPIVHGQTLKYNMKVRAGRGFSFQELKATGDCMRVARQIDFEVD

Arabidopsis top hitse value%identityAlignment
AT3G49010.1 breast basic conserved 11.8e-3163.92Show/hide
Query:  MKH-NFIPSGHFRKHWQSYVRTWFNQPVMETRRRNVHQEKAVKNLPRSTAGPPRPIVHGQTLKYNMKVRAGRGFSFQELKATGDCMRVARQIDFEVD
        MKH N IP+GHF+KHWQ+YV+TWFNQP  +TRRR   Q+KAVK  PR T+GP RP+VHGQTLKYNMKVR G+GF+ +ELKA G   ++A  I   VD
Subjt:  MKH-NFIPSGHFRKHWQSYVRTWFNQPVMETRRRNVHQEKAVKNLPRSTAGPPRPIVHGQTLKYNMKVRAGRGFSFQELKATGDCMRVARQIDFEVD

AT3G49010.2 breast basic conserved 11.8e-3163.92Show/hide
Query:  MKH-NFIPSGHFRKHWQSYVRTWFNQPVMETRRRNVHQEKAVKNLPRSTAGPPRPIVHGQTLKYNMKVRAGRGFSFQELKATGDCMRVARQIDFEVD
        MKH N IP+GHF+KHWQ+YV+TWFNQP  +TRRR   Q+KAVK  PR T+GP RP+VHGQTLKYNMKVR G+GF+ +ELKA G   ++A  I   VD
Subjt:  MKH-NFIPSGHFRKHWQSYVRTWFNQPVMETRRRNVHQEKAVKNLPRSTAGPPRPIVHGQTLKYNMKVRAGRGFSFQELKATGDCMRVARQIDFEVD

AT3G49010.3 breast basic conserved 11.8e-3163.92Show/hide
Query:  MKH-NFIPSGHFRKHWQSYVRTWFNQPVMETRRRNVHQEKAVKNLPRSTAGPPRPIVHGQTLKYNMKVRAGRGFSFQELKATGDCMRVARQIDFEVD
        MKH N IP+GHF+KHWQ+YV+TWFNQP  +TRRR   Q+KAVK  PR T+GP RP+VHGQTLKYNMKVR G+GF+ +ELKA G   ++A  I   VD
Subjt:  MKH-NFIPSGHFRKHWQSYVRTWFNQPVMETRRRNVHQEKAVKNLPRSTAGPPRPIVHGQTLKYNMKVRAGRGFSFQELKATGDCMRVARQIDFEVD

AT3G49010.4 breast basic conserved 11.8e-3163.92Show/hide
Query:  MKH-NFIPSGHFRKHWQSYVRTWFNQPVMETRRRNVHQEKAVKNLPRSTAGPPRPIVHGQTLKYNMKVRAGRGFSFQELKATGDCMRVARQIDFEVD
        MKH N IP+GHF+KHWQ+YV+TWFNQP  +TRRR   Q+KAVK  PR T+GP RP+VHGQTLKYNMKVR G+GF+ +ELKA G   ++A  I   VD
Subjt:  MKH-NFIPSGHFRKHWQSYVRTWFNQPVMETRRRNVHQEKAVKNLPRSTAGPPRPIVHGQTLKYNMKVRAGRGFSFQELKATGDCMRVARQIDFEVD

AT5G23900.1 Ribosomal protein L13e family protein1.4e-3164.95Show/hide
Query:  MKH-NFIPSGHFRKHWQSYVRTWFNQPVMETRRRNVHQEKAVKNLPRSTAGPPRPIVHGQTLKYNMKVRAGRGFSFQELKATGDCMRVARQIDFEVD
        MKH N IPS HFRKHWQ+YV+TWFNQP  +TRRR   Q+KAVK  PR T+GP RP+VHGQTLKYNMKVRAG+GF+ +ELK  G   ++A  I   VD
Subjt:  MKH-NFIPSGHFRKHWQSYVRTWFNQPVMETRRRNVHQEKAVKNLPRSTAGPPRPIVHGQTLKYNMKVRAGRGFSFQELKATGDCMRVARQIDFEVD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGCACAATTTTATCCCTAGTGGGCACTTTAGAAAGCACTGGCAAAGTTATGTTAGAACTTGGTTCAACCAACCTGTCATGGAAACAAGGAGAAGGAATGTTCATCA
AGAAAAGGCTGTGAAAAATTTACCTCGGTCTACTGCTGGACCACCTCGTCCTATTGTTCATGGACAAACATTGAAGTATAACATGAAAGTGAGGGCTGGTAGAGGCTTCT
CTTTTCAAGAGTTGAAGGCAACTGGAGATTGCATGCGTGTTGCTCGCCAGATCGATTTCGAAGTTGATCCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAGCACAATTTTATCCCTAGTGGGCACTTTAGAAAGCACTGGCAAAGTTATGTTAGAACTTGGTTCAACCAACCTGTCATGGAAACAAGGAGAAGGAATGTTCATCA
AGAAAAGGCTGTGAAAAATTTACCTCGGTCTACTGCTGGACCACCTCGTCCTATTGTTCATGGACAAACATTGAAGTATAACATGAAAGTGAGGGCTGGTAGAGGCTTCT
CTTTTCAAGAGTTGAAGGCAACTGGAGATTGCATGCGTGTTGCTCGCCAGATCGATTTCGAAGTTGATCCTTAA
Protein sequenceShow/hide protein sequence
MKHNFIPSGHFRKHWQSYVRTWFNQPVMETRRRNVHQEKAVKNLPRSTAGPPRPIVHGQTLKYNMKVRAGRGFSFQELKATGDCMRVARQIDFEVDP