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Lag0022288 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0022288
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRibonuclease H
Genome locationchr7:23126036..23126458
RNA-Seq ExpressionLag0022288
SyntenyLag0022288
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022154102.1 uncharacterized protein LOC111021438 [Momordica charantia]1.1e-2354.81Show/hide
Query:  MKLGRDCLRPSTTPLVGFGGEKASPEGSFELLVTFGEGRQMLTKMVNFLVVDCISAYNVKLRRSTLHELKVVESTYHRILKFPTENRVGVVHGEQRTSRE
        M LG++ L+ S TPL+GFGGE+  P G  EL VTF  G + +TKMV+FLVVD  S+YN  L R T++ LK + STYH+ +KFPT   VG + GEQR  RE
Subjt:  MKLGRDCLRPSTTPLVGFGGEKASPEGSFELLVTFGEGRQMLTKMVNFLVVDCISAYNVKLRRSTLHELKVVESTYHRILKFPTENRVGVVHGEQRTSRE

Query:  CYFT
        CY+T
Subjt:  CYFT

XP_022158687.1 uncharacterized protein LOC111025147 [Momordica charantia]1.0e-2450.85Show/hide
Query:  MKLGRDCLRPSTTPLVGFGGEKASPEGSFELLVTFGEGRQMLTKMVNFLVVDCISAYNVKLRRSTLHELKVVESTYHRILKFPTENRVGVVHGEQRTSRE
        M LG   L+ S  PL+GFG E+  PEG  EL VTFG G + +TKM++FLVVD  S+YN  L RST+H LK + STYH+ +KFPT   VG + GEQR SRE
Subjt:  MKLGRDCLRPSTTPLVGFGGEKASPEGSFELLVTFGEGRQMLTKMVNFLVVDCISAYNVKLRRSTLHELKVVESTYHRILKFPTENRVGVVHGEQRTSRE

Query:  CYFTTPKETKKKAKAALC
        CY+T+ +   + +    C
Subjt:  CYFTTPKETKKKAKAALC

XP_023895777.1 uncharacterized protein LOC112007641 [Quercus suber]6.5e-2457.84Show/hide
Query:  MKLGRDCLRPSTTPLVGFGGEKASPEGSFELLVTFGEGRQMLTKMVNFLVVDCISAYNVKLRRSTLHELKVVESTYHRILKFPTENRVGVVHGEQRTSRE
        M+LGRD LRP+++PLVGFGG K  P GS  L VT G   Q +TK VNFLVVDC S+YN  + R TL+  K + STYH  +KFPTE+  G VHG+Q  +RE
Subjt:  MKLGRDCLRPSTTPLVGFGGEKASPEGSFELLVTFGEGRQMLTKMVNFLVVDCISAYNVKLRRSTLHELKVVESTYHRILKFPTENRVGVVHGEQRTSRE

Query:  CY
        CY
Subjt:  CY

XP_023897071.1 uncharacterized protein LOC112008938 [Quercus suber]6.5e-2457.84Show/hide
Query:  MKLGRDCLRPSTTPLVGFGGEKASPEGSFELLVTFGEGRQMLTKMVNFLVVDCISAYNVKLRRSTLHELKVVESTYHRILKFPTENRVGVVHGEQRTSRE
        M+LGRD LRP+++PLVGFGG K  P GS  L VT G   Q +TK VNFLVVDC S+YN  + R TL+  K + STYH  +KFPTE+  G VHG+Q  +RE
Subjt:  MKLGRDCLRPSTTPLVGFGGEKASPEGSFELLVTFGEGRQMLTKMVNFLVVDCISAYNVKLRRSTLHELKVVESTYHRILKFPTENRVGVVHGEQRTSRE

Query:  CY
        CY
Subjt:  CY

XP_023903529.1 uncharacterized protein LOC112015361 [Quercus suber]6.5e-2457.84Show/hide
Query:  MKLGRDCLRPSTTPLVGFGGEKASPEGSFELLVTFGEGRQMLTKMVNFLVVDCISAYNVKLRRSTLHELKVVESTYHRILKFPTENRVGVVHGEQRTSRE
        M+LGRD LRP+++PLVGFGG K  P GS  L VT G   Q +TK VNFLVVDC S+YN  + R TL+  K + STYH  +KFPTE+  G VHG+Q  +RE
Subjt:  MKLGRDCLRPSTTPLVGFGGEKASPEGSFELLVTFGEGRQMLTKMVNFLVVDCISAYNVKLRRSTLHELKVVESTYHRILKFPTENRVGVVHGEQRTSRE

Query:  CY
        CY
Subjt:  CY

TrEMBL top hitse value%identityAlignment
A0A6J1CTS4 uncharacterized protein LOC1110141477.1e-2449.15Show/hide
Query:  MKLGRDCLRPSTTPLVGFGGEKASPEGSFELLVTFGEGRQMLTKMVNFLVVDCISAYNVKLRRSTLHELKVVESTYHRILKFPTENRVGVVHGEQRTSRE
        M LG   L+ S  PLVGFGGE+  PEG  E  VTFG G + +TKMV+ LVV+  S+YN  L R T+H L+ + STYH+ +KFPT   VG + GEQR SRE
Subjt:  MKLGRDCLRPSTTPLVGFGGEKASPEGSFELLVTFGEGRQMLTKMVNFLVVDCISAYNVKLRRSTLHELKVVESTYHRILKFPTENRVGVVHGEQRTSRE

Query:  CYFTTPKETKKKAKAALC
        CY+T+ ++  + +    C
Subjt:  CYFTTPKETKKKAKAALC

A0A6J1CZ14 uncharacterized protein LOC1110159011.2e-2350.45Show/hide
Query:  MKLGRDCLRPSTTPLVGFGGEKASPEGSFELLVTFGEGRQMLTKMVNFLVVDCISAYNVKLRRSTLHELKVVESTYHRILKFPTENRVGVVHGEQRTSRE
        M LG + L+ S TPL+GFGGE+  P+G  EL +TF    + +T+MV+FLVVD  S+YN  L R T+H L+ + STYH+ +KFPT   VG + GEQR SRE
Subjt:  MKLGRDCLRPSTTPLVGFGGEKASPEGSFELLVTFGEGRQMLTKMVNFLVVDCISAYNVKLRRSTLHELKVVESTYHRILKFPTENRVGVVHGEQRTSRE

Query:  CYFTTPKETKK
        CY+T+ +   K
Subjt:  CYFTTPKETKK

A0A6J1DKR9 uncharacterized protein LOC1110214385.4e-2454.81Show/hide
Query:  MKLGRDCLRPSTTPLVGFGGEKASPEGSFELLVTFGEGRQMLTKMVNFLVVDCISAYNVKLRRSTLHELKVVESTYHRILKFPTENRVGVVHGEQRTSRE
        M LG++ L+ S TPL+GFGGE+  P G  EL VTF  G + +TKMV+FLVVD  S+YN  L R T++ LK + STYH+ +KFPT   VG + GEQR  RE
Subjt:  MKLGRDCLRPSTTPLVGFGGEKASPEGSFELLVTFGEGRQMLTKMVNFLVVDCISAYNVKLRRSTLHELKVVESTYHRILKFPTENRVGVVHGEQRTSRE

Query:  CYFT
        CY+T
Subjt:  CYFT

A0A6J1DQY2 uncharacterized protein LOC1110223211.2e-2350.85Show/hide
Query:  MKLGRDCLRPSTTPLVGFGGEKASPEGSFELLVTFGEGRQMLTKMVNFLVVDCISAYNVKLRRSTLHELKVVESTYHRILKFPTENRVGVVHGEQRTSRE
        M LG   L+ S  PLVGFGGE+   EG  EL VTFG G + +TKMV+FLVV+  S+YN  L R T+H LK + STYH+  KFPT   VG + GEQR SRE
Subjt:  MKLGRDCLRPSTTPLVGFGGEKASPEGSFELLVTFGEGRQMLTKMVNFLVVDCISAYNVKLRRSTLHELKVVESTYHRILKFPTENRVGVVHGEQRTSRE

Query:  CYFTTPKETKKKAKAALC
        CY T+ ++  + +    C
Subjt:  CYFTTPKETKKKAKAALC

A0A6J1DXV4 uncharacterized protein LOC1110251474.9e-2550.85Show/hide
Query:  MKLGRDCLRPSTTPLVGFGGEKASPEGSFELLVTFGEGRQMLTKMVNFLVVDCISAYNVKLRRSTLHELKVVESTYHRILKFPTENRVGVVHGEQRTSRE
        M LG   L+ S  PL+GFG E+  PEG  EL VTFG G + +TKM++FLVVD  S+YN  L RST+H LK + STYH+ +KFPT   VG + GEQR SRE
Subjt:  MKLGRDCLRPSTTPLVGFGGEKASPEGSFELLVTFGEGRQMLTKMVNFLVVDCISAYNVKLRRSTLHELKVVESTYHRILKFPTENRVGVVHGEQRTSRE

Query:  CYFTTPKETKKKAKAALC
        CY+T+ +   + +    C
Subjt:  CYFTTPKETKKKAKAALC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAACTAGGAAGAGACTGCTTAAGGCCCAGTACTACACCATTGGTGGGATTCGGAGGAGAAAAGGCGAGCCCTGAAGGAAGCTTTGAACTTCTAGTTACCTTCGGAGA
AGGGCGGCAAATGCTCACGAAGATGGTCAACTTCTTGGTAGTAGATTGCATCTCAGCTTATAACGTTAAACTAAGGAGGTCGACCCTACATGAACTCAAAGTTGTGGAAT
CAACCTACCACCGGATCTTGAAGTTTCCCACTGAGAACCGTGTAGGAGTGGTGCATGGAGAACAAAGGACATCCAGAGAGTGCTATTTCACAACACCCAAGGAAACAAAG
AAAAAAGCCAAAGCAGCCCTGTGCTCGGACAATGGTCGAGGCCGACTAGGGGAGGAGGAGAGCTTAGGAACTCCCCTCCCGATGGAATATTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAACTAGGAAGAGACTGCTTAAGGCCCAGTACTACACCATTGGTGGGATTCGGAGGAGAAAAGGCGAGCCCTGAAGGAAGCTTTGAACTTCTAGTTACCTTCGGAGA
AGGGCGGCAAATGCTCACGAAGATGGTCAACTTCTTGGTAGTAGATTGCATCTCAGCTTATAACGTTAAACTAAGGAGGTCGACCCTACATGAACTCAAAGTTGTGGAAT
CAACCTACCACCGGATCTTGAAGTTTCCCACTGAGAACCGTGTAGGAGTGGTGCATGGAGAACAAAGGACATCCAGAGAGTGCTATTTCACAACACCCAAGGAAACAAAG
AAAAAAGCCAAAGCAGCCCTGTGCTCGGACAATGGTCGAGGCCGACTAGGGGAGGAGGAGAGCTTAGGAACTCCCCTCCCGATGGAATATTAA
Protein sequenceShow/hide protein sequence
MKLGRDCLRPSTTPLVGFGGEKASPEGSFELLVTFGEGRQMLTKMVNFLVVDCISAYNVKLRRSTLHELKVVESTYHRILKFPTENRVGVVHGEQRTSRECYFTTPKETK
KKAKAALCSDNGRGRLGEEESLGTPLPMEY