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Lag0022293 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0022293
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionGag protease polyprotein
Genome locationchr7:23493805..23494128
RNA-Seq ExpressionLag0022293
SyntenyLag0022293
Gene Ontology termsNA
InterPro domainsIPR005162 - Retrotransposon gag domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022156662.1 uncharacterized protein LOC111023512 [Momordica charantia]5.5e-2352.48Show/hide
Query:  MVVKLGLSSIETIFCHMNCPKDKKVYYVAFLLQDNVLIWWQSAKRSIDVSNGPVTWLQFKEAFFRKYYPANARFRKQAEFIALDLGSRTVEEYETVFSRL
        M+ +  LS +ETIF +M C +++KV    F+L+D+  +WW+S +R IDVS GPVTWLQFKEAFF++YYPA   +RKQ EF+ L   +R+VEEY+  F++L
Subjt:  MVVKLGLSSIETIFCHMNCPKDKKVYYVAFLLQDNVLIWWQSAKRSIDVSNGPVTWLQFKEAFFRKYYPANARFRKQAEFIALDLGSRTVEEYETVFSRL

Query:  S
        S
Subjt:  S

XP_038885209.1 uncharacterized protein LOC120075675 [Benincasa hispida]5.7e-2052.75Show/hide
Query:  KLGLSSIETIFCHMNCPKDKKVYYVAFLLQDNVLIWWQSAKRSIDVSNGPVTWLQFKEAFFRKYYPANARFRKQAEFIALDLGSRTVEEYE
        +L +SSI+TIF +M CP+D+KV    F+L D   IWWQSA+R + V   PVTW QFKE F+ KY+ AN  + KQ EF+ L  G R+VEEY+
Subjt:  KLGLSSIETIFCHMNCPKDKKVYYVAFLLQDNVLIWWQSAKRSIDVSNGPVTWLQFKEAFFRKYYPANARFRKQAEFIALDLGSRTVEEYE

XP_038889305.1 uncharacterized protein LOC120079215 [Benincasa hispida]1.5e-2052.04Show/hide
Query:  KLGLSSIETIFCHMNCPKDKKVYYVAFLLQDNVLIWWQSAKRSIDVSNGPVTWLQFKEAFFRKYYPANARFRKQAEFIALDLGSRTVEEYETVFSRLS
        K+ LSSIETIFC M CP++ K+    F+L  N  IWW SA++ ID     VTW QFKE F+ KY+ AN R+ KQAEF+ L     +VEEYE  F +LS
Subjt:  KLGLSSIETIFCHMNCPKDKKVYYVAFLLQDNVLIWWQSAKRSIDVSNGPVTWLQFKEAFFRKYYPANARFRKQAEFIALDLGSRTVEEYETVFSRLS

XP_038891712.1 uncharacterized protein LOC120081110 [Benincasa hispida]5.2e-2152.04Show/hide
Query:  KLGLSSIETIFCHMNCPKDKKVYYVAFLLQDNVLIWWQSAKRSIDVSNGPVTWLQFKEAFFRKYYPANARFRKQAEFIALDLGSRTVEEYETVFSRLS
        +L +S IETIF +M CP+D+KV    F+L D   IWWQ A+R + V   PVTW QFKE F+ KY+ AN R+ KQ EF+ L  G R+VEEY+  F  LS
Subjt:  KLGLSSIETIFCHMNCPKDKKVYYVAFLLQDNVLIWWQSAKRSIDVSNGPVTWLQFKEAFFRKYYPANARFRKQAEFIALDLGSRTVEEYETVFSRLS

XP_038896687.1 uncharacterized protein LOC120084949 [Benincasa hispida]3.4e-2052.75Show/hide
Query:  KLGLSSIETIFCHMNCPKDKKVYYVAFLLQDNVLIWWQSAKRSIDVSNGPVTWLQFKEAFFRKYYPANARFRKQAEFIALDLGSRTVEEYE
        +L +SSIETIF +M CP+D+KV    F+L D   IWWQSA+R + V   PVTW QFKE F+ KY+ AN ++ KQ EF+ L  G R+VE+Y+
Subjt:  KLGLSSIETIFCHMNCPKDKKVYYVAFLLQDNVLIWWQSAKRSIDVSNGPVTWLQFKEAFFRKYYPANARFRKQAEFIALDLGSRTVEEYE

TrEMBL top hitse value%identityAlignment
A0A1S3C5M7 uncharacterized protein LOC1034967423.4e-1848.98Show/hide
Query:  KLGLSSIETIFCHMNCPKDKKVYYVAFLLQDNVLIWWQSAKRSIDVSNGPVTWLQFKEAFFRKYYPANARFRKQAEFIALDLGSRTVEEYETVFSRLS
        KL LSS+ETIF  M CP D+KV    FLL++   IWWQS +R +  +   +TW QFKE+F+ K+ P++ R  K+ EFI L  G  TVEEY+  F  LS
Subjt:  KLGLSSIETIFCHMNCPKDKKVYYVAFLLQDNVLIWWQSAKRSIDVSNGPVTWLQFKEAFFRKYYPANARFRKQAEFIALDLGSRTVEEYETVFSRLS

A0A5D3BCD2 Gag protease polyprotein3.4e-1848.98Show/hide
Query:  KLGLSSIETIFCHMNCPKDKKVYYVAFLLQDNVLIWWQSAKRSIDVSNGPVTWLQFKEAFFRKYYPANARFRKQAEFIALDLGSRTVEEYETVFSRLS
        KL LSS+ETIF  M CP D+KV    FLL++   IWWQS +R +  +   +TW QFKE+F+ K+ P++ R  K+ EFI L  G  TVEEY+  F  LS
Subjt:  KLGLSSIETIFCHMNCPKDKKVYYVAFLLQDNVLIWWQSAKRSIDVSNGPVTWLQFKEAFFRKYYPANARFRKQAEFIALDLGSRTVEEYETVFSRLS

A0A6J1DSJ6 uncharacterized protein LOC1110235122.7e-2352.48Show/hide
Query:  MVVKLGLSSIETIFCHMNCPKDKKVYYVAFLLQDNVLIWWQSAKRSIDVSNGPVTWLQFKEAFFRKYYPANARFRKQAEFIALDLGSRTVEEYETVFSRL
        M+ +  LS +ETIF +M C +++KV    F+L+D+  +WW+S +R IDVS GPVTWLQFKEAFF++YYPA   +RKQ EF+ L   +R+VEEY+  F++L
Subjt:  MVVKLGLSSIETIFCHMNCPKDKKVYYVAFLLQDNVLIWWQSAKRSIDVSNGPVTWLQFKEAFFRKYYPANARFRKQAEFIALDLGSRTVEEYETVFSRL

Query:  S
        S
Subjt:  S

A0A6J1EPR7 uncharacterized protein LOC1114345294.4e-1843Show/hide
Query:  VVKLGLSSIETIFCHMNCPKDKKVYYVAFLLQDNVLIWWQSAKRSIDVSNGPVTWLQFKEAFFRKYYPANARFRKQAEFIALDLGSRTVEEYETVFSRLS
        V +L LS+I+ IF  M C ++ ++  V +LL+++  +WWQSA R+I      +TW+QF++AF RKY+    R++KQ EF++++  +R+VEEYE  F+RLS
Subjt:  VVKLGLSSIETIFCHMNCPKDKKVYYVAFLLQDNVLIWWQSAKRSIDVSNGPVTWLQFKEAFFRKYYPANARFRKQAEFIALDLGSRTVEEYETVFSRLS

E5GB72 Ty3-gypsy retrotransposon protein3.4e-1848.98Show/hide
Query:  KLGLSSIETIFCHMNCPKDKKVYYVAFLLQDNVLIWWQSAKRSIDVSNGPVTWLQFKEAFFRKYYPANARFRKQAEFIALDLGSRTVEEYETVFSRLS
        KL LSS+ETIF  M CP D+KV    FLL++   IWWQS +R +  +   +TW QFKE+F+ K+ P++ R  K+ EFI L  G  TVEEY+  F  LS
Subjt:  KLGLSSIETIFCHMNCPKDKKVYYVAFLLQDNVLIWWQSAKRSIDVSNGPVTWLQFKEAFFRKYYPANARFRKQAEFIALDLGSRTVEEYETVFSRLS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGGTGAAACTGGGGCTTTCTTCCATTGAAACCATCTTTTGTCACATGAATTGTCCGAAAGACAAGAAGGTTTATTATGTCGCTTTTTTGTTGCAAGACAATGTGTT
GATTTGGTGGCAATCGGCCAAGAGGTCCATAGACGTCAGTAATGGACCAGTGACATGGCTCCAGTTCAAGGAAGCATTCTTTAGGAAATATTACCCTGCAAATGCACGTT
TCAGGAAGCAAGCAGAGTTTATAGCTCTCGATCTGGGGAGCCGAACTGTAGAAGAATATGAGACGGTGTTTTCCAGACTTTCGAGTTTGCTCCGACCATGGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTGGTGAAACTGGGGCTTTCTTCCATTGAAACCATCTTTTGTCACATGAATTGTCCGAAAGACAAGAAGGTTTATTATGTCGCTTTTTTGTTGCAAGACAATGTGTT
GATTTGGTGGCAATCGGCCAAGAGGTCCATAGACGTCAGTAATGGACCAGTGACATGGCTCCAGTTCAAGGAAGCATTCTTTAGGAAATATTACCCTGCAAATGCACGTT
TCAGGAAGCAAGCAGAGTTTATAGCTCTCGATCTGGGGAGCCGAACTGTAGAAGAATATGAGACGGTGTTTTCCAGACTTTCGAGTTTGCTCCGACCATGGTAG
Protein sequenceShow/hide protein sequence
MVVKLGLSSIETIFCHMNCPKDKKVYYVAFLLQDNVLIWWQSAKRSIDVSNGPVTWLQFKEAFFRKYYPANARFRKQAEFIALDLGSRTVEEYETVFSRLSSLLRPW