; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0022311 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0022311
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRT_RNaseH_2 domain-containing protein
Genome locationchr7:24285829..24286737
RNA-Seq ExpressionLag0022311
SyntenyLag0022311
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8661093.1 hypothetical protein F3Y22_tig00116939pilonHSYRG00213 [Hibiscus syriacus]1.2e-0834.91Show/hide
Query:  TVPFIRFVNELVRAKYQEVLKRDFLFERGF-------GSDLPRFLEYGITNLGWRQFCAKPEPVNANIVREFYANLDVKNDFEVIVRGVPVQWSPEAINN
        T  + +F N+  +A++Q    R   FE GF       G   P  ++  +T L W++F   P  VNA++V+EFYAN+   N + + VRG  ++++  AIN+
Subjt:  TVPFIRFVNELVRAKYQEVLKRDFLFERGF-------GSDLPRFLEYGITNLGWRQFCAKPEPVNANIVREFYANLDVKNDFEVIVRGVPVQWSPEAINN

Query:  LFDLQD
         F LQD
Subjt:  LFDLQD

KAE8695166.1 hypothetical protein F3Y22_tig00110733pilonHSYRG00282 [Hibiscus syriacus]2.4e-0937.76Show/hide
Query:  FVNELVRAKYQEVLKRDFLFERGF------GSDLPRFLEYGITNLGWRQFCAKPEPVNANIVREFYANLDVKNDFEVIVRGVPVQWSPEAINNLFDLQ
        FV+E  +  YQ +  R   FE GF       ++L   +   +T   W++F   P PVNA IV+EFY+N+   N   V+VRG+ ++++P AIN  F LQ
Subjt:  FVNELVRAKYQEVLKRDFLFERGF------GSDLPRFLEYGITNLGWRQFCAKPEPVNANIVREFYANLDVKNDFEVIVRGVPVQWSPEAINNLFDLQ

PON35554.1 hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii]6.9e-0941.75Show/hide
Query:  IRFVNELVRAKYQ-EVLKRDFLFERGFGSD-------LPRFLEYGITNLGWRQFCAKPEPVNANIVREFYANLDVKNDFEVIVRGVPVQWSPEAINNLFD
        ++F  E    +Y+  +  R    E+GF  D       LP F+   IT   W+QFCA PE     +VREFYANL    +  V VRGV V WS EAIN +F 
Subjt:  IRFVNELVRAKYQ-EVLKRDFLFERGFGSD-------LPRFLEYGITNLGWRQFCAKPEPVNANIVREFYANLDVKNDFEVIVRGVPVQWSPEAINNLFD

Query:  LQD
        L D
Subjt:  LQD

PON42276.1 hypothetical protein PanWU01x14_283280 [Parasponia andersonii]3.1e-0940.2Show/hide
Query:  IRFVNELVRAKYQE-VLKRDFLFERGFGSD------LPRFLEYGITNLGWRQFCAKPEPVNANIVREFYANLDVKNDFEVIVRGVPVQWSPEAINNLFDL
        ++  +E    +Y+E +  R    E+GF  D       P F+E  IT   W+ FCA PE + A +VREFYAN+   +D  V VRGV V  S EAIN ++ L
Subjt:  IRFVNELVRAKYQE-VLKRDFLFERGFGSD------LPRFLEYGITNLGWRQFCAKPEPVNANIVREFYANLDVKNDFEVIVRGVPVQWSPEAINNLFDL

Query:  QD
         D
Subjt:  QD

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]4.0e-0941.75Show/hide
Query:  IRFVNELVRAKYQ-EVLKRDFLFERGFGSD-------LPRFLEYGITNLGWRQFCAKPEPVNANIVREFYANLDVKNDFEVIVRGVPVQWSPEAINNLFD
        ++F  E    +Y+  +  R    E+GF  D       LP F+   IT   W+QFCA PE     +VREFYANL    +  V VRGV V WS EAIN +F 
Subjt:  IRFVNELVRAKYQ-EVLKRDFLFERGFGSD-------LPRFLEYGITNLGWRQFCAKPEPVNANIVREFYANLDVKNDFEVIVRGVPVQWSPEAINNLFD

Query:  LQD
        L D
Subjt:  LQD

TrEMBL top hitse value%identityAlignment
A0A2P5AGA5 Uncharacterized protein (Fragment)3.3e-0941.75Show/hide
Query:  IRFVNELVRAKYQ-EVLKRDFLFERGFGSD-------LPRFLEYGITNLGWRQFCAKPEPVNANIVREFYANLDVKNDFEVIVRGVPVQWSPEAINNLFD
        ++F  E    +Y+  +  R    E+GF  D       LP F+   IT   W+QFCA PE     +VREFYANL    +  V VRGV V WS EAIN +F 
Subjt:  IRFVNELVRAKYQ-EVLKRDFLFERGFGSD-------LPRFLEYGITNLGWRQFCAKPEPVNANIVREFYANLDVKNDFEVIVRGVPVQWSPEAINNLFD

Query:  LQD
        L D
Subjt:  LQD

A0A2P5B0K0 Uncharacterized protein1.5e-0940.2Show/hide
Query:  IRFVNELVRAKYQE-VLKRDFLFERGFGSD------LPRFLEYGITNLGWRQFCAKPEPVNANIVREFYANLDVKNDFEVIVRGVPVQWSPEAINNLFDL
        ++  +E    +Y+E +  R    E+GF  D       P F+E  IT   W+ FCA PE + A +VREFYAN+   +D  V VRGV V  S EAIN ++ L
Subjt:  IRFVNELVRAKYQE-VLKRDFLFERGFGSD------LPRFLEYGITNLGWRQFCAKPEPVNANIVREFYANLDVKNDFEVIVRGVPVQWSPEAINNLFDL

Query:  QD
         D
Subjt:  QD

A0A2P5BCG4 Uncharacterized protein (Fragment)2.0e-0941.75Show/hide
Query:  IRFVNELVRAKYQ-EVLKRDFLFERGFGSD-------LPRFLEYGITNLGWRQFCAKPEPVNANIVREFYANLDVKNDFEVIVRGVPVQWSPEAINNLFD
        ++F  E    +Y+  +  R    E+GF  D       LP F+   IT   W+QFCA PE     +VREFYANL    +  V VRGV V WS EAIN +F 
Subjt:  IRFVNELVRAKYQ-EVLKRDFLFERGFGSD-------LPRFLEYGITNLGWRQFCAKPEPVNANIVREFYANLDVKNDFEVIVRGVPVQWSPEAINNLFD

Query:  LQD
        L D
Subjt:  LQD

A0A6A2WM54 Uncharacterized protein5.7e-0934.91Show/hide
Query:  TVPFIRFVNELVRAKYQEVLKRDFLFERGF-------GSDLPRFLEYGITNLGWRQFCAKPEPVNANIVREFYANLDVKNDFEVIVRGVPVQWSPEAINN
        T  + +F N+  +A++Q    R   FE GF       G   P  ++  +T L W++F   P  VNA++V+EFYAN+   N + + VRG  ++++  AIN+
Subjt:  TVPFIRFVNELVRAKYQEVLKRDFLFERGF-------GSDLPRFLEYGITNLGWRQFCAKPEPVNANIVREFYANLDVKNDFEVIVRGVPVQWSPEAINN

Query:  LFDLQD
         F LQD
Subjt:  LFDLQD

A0A6A2ZUE4 Uncharacterized protein1.1e-0937.76Show/hide
Query:  FVNELVRAKYQEVLKRDFLFERGF------GSDLPRFLEYGITNLGWRQFCAKPEPVNANIVREFYANLDVKNDFEVIVRGVPVQWSPEAINNLFDLQ
        FV+E  +  YQ +  R   FE GF       ++L   +   +T   W++F   P PVNA IV+EFY+N+   N   V+VRG+ ++++P AIN  F LQ
Subjt:  FVNELVRAKYQEVLKRDFLFERGF------GSDLPRFLEYGITNLGWRQFCAKPEPVNANIVREFYANLDVKNDFEVIVRGVPVQWSPEAINNLFDLQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAAGACGAGAGCGAGAAAAGAGAGAGATAACGAGGAAGAGGAGGTACCCGTTACCCCCGAAGTTCAGAAGGTAAAAACGAAGAAAAAGAGAACGCCAGAGGAAAA
AGAAGCCAAGAAAAGGAGAAGGCAGCAACGGACTGCAGAACAGGAAGAAGTTCAAGAAGTAGCAGAGGTTGTTGCCACTACTGCGGAGGAAGGAAGTACTCAAGAACCTG
AAGTGCAAAACCCAGATACGGTTCAAGAAAAGATTGCTGAGAAAAATCAAGAAACAGAGGTTGAGGAGCAGGTCGCAGGTATGCCTGAAAAAGAGAAAACACCGGAGCCG
GTGCAGGAGGCTCATGTTGAAGTCGTAATGCCCGAACCACCAAAGCGCCGCCGCATCAAACGGAAGGCGGGTCGCGTGAGGGTGATTCGGAACACTCCATCGCCTCTGAC
GTCGGACTCTGAGGAAGAAAAGAGGGAAGCTGAAAATAAGGCAAAGGAAGAAGAGGCAAGGAAGGAACCAACGGTACCGTTCATTCGCTTTGTCAACGAGCTTGTGAGAG
CAAAATACCAAGAGGTGCTGAAGCGTGATTTCTTGTTCGAGCGGGGATTTGGCAGTGATTTGCCAAGGTTCTTAGAGTATGGAATAACGAACCTTGGGTGGAGGCAGTTT
TGTGCGAAGCCTGAACCTGTAAATGCCAACATTGTTCGAGAATTCTACGCTAATCTTGACGTTAAGAATGACTTTGAAGTTATAGTTCGAGGAGTGCCTGTACAGTGGAG
CCCAGAAGCCATTAATAATTTGTTTGATCTCCAGGATTTTCGCATGCAGCTTTTAATGAGATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAAAGACGAGAGCGAGAAAAGAGAGAGATAACGAGGAAGAGGAGGTACCCGTTACCCCCGAAGTTCAGAAGGTAAAAACGAAGAAAAAGAGAACGCCAGAGGAAAA
AGAAGCCAAGAAAAGGAGAAGGCAGCAACGGACTGCAGAACAGGAAGAAGTTCAAGAAGTAGCAGAGGTTGTTGCCACTACTGCGGAGGAAGGAAGTACTCAAGAACCTG
AAGTGCAAAACCCAGATACGGTTCAAGAAAAGATTGCTGAGAAAAATCAAGAAACAGAGGTTGAGGAGCAGGTCGCAGGTATGCCTGAAAAAGAGAAAACACCGGAGCCG
GTGCAGGAGGCTCATGTTGAAGTCGTAATGCCCGAACCACCAAAGCGCCGCCGCATCAAACGGAAGGCGGGTCGCGTGAGGGTGATTCGGAACACTCCATCGCCTCTGAC
GTCGGACTCTGAGGAAGAAAAGAGGGAAGCTGAAAATAAGGCAAAGGAAGAAGAGGCAAGGAAGGAACCAACGGTACCGTTCATTCGCTTTGTCAACGAGCTTGTGAGAG
CAAAATACCAAGAGGTGCTGAAGCGTGATTTCTTGTTCGAGCGGGGATTTGGCAGTGATTTGCCAAGGTTCTTAGAGTATGGAATAACGAACCTTGGGTGGAGGCAGTTT
TGTGCGAAGCCTGAACCTGTAAATGCCAACATTGTTCGAGAATTCTACGCTAATCTTGACGTTAAGAATGACTTTGAAGTTATAGTTCGAGGAGTGCCTGTACAGTGGAG
CCCAGAAGCCATTAATAATTTGTTTGATCTCCAGGATTTTCGCATGCAGCTTTTAATGAGATGA
Protein sequenceShow/hide protein sequence
MAKTRARKERDNEEEEVPVTPEVQKVKTKKKRTPEEKEAKKRRRQQRTAEQEEVQEVAEVVATTAEEGSTQEPEVQNPDTVQEKIAEKNQETEVEEQVAGMPEKEKTPEP
VQEAHVEVVMPEPPKRRRIKRKAGRVRVIRNTPSPLTSDSEEEKREAENKAKEEEARKEPTVPFIRFVNELVRAKYQEVLKRDFLFERGFGSDLPRFLEYGITNLGWRQF
CAKPEPVNANIVREFYANLDVKNDFEVIVRGVPVQWSPEAINNLFDLQDFRMQLLMR