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Lag0022421 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0022421
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase
Genome locationchr7:27878597..27879409
RNA-Seq ExpressionLag0022421
SyntenyLag0022421
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022151688.1 uncharacterized protein LOC111019603 [Momordica charantia]1.6e-1630.94Show/hide
Query:  QHIGANEAPAHGVDVKFIKSFMKAKPPSFDGHSESSEVVVEWTAALEAIFQFLGADAQQRVQEAAFMLKAYARTWWNVVGQTENRPESPISLSGFKGHVR
        Q +   +A A   + +FI+ F +  PP+F+G SE + VV EW   LEA++ +LG   Q +V+ A FML+  A  WW+VV   E+    PI+ +  K  + 
Subjt:  QHIGANEAPAHGVDVKFIKSFMKAKPPSFDGHSESSEVVVEWTAALEAIFQFLGADAQQRVQEAAFMLKAYARTWWNVVGQTENRPESPISLSGFKGHVR

Query:  DRFGCCFADVELEAEFISLVQGTL-------------------------------------------LGRPTTFATALASARMLDKDILRMEQ-SQEVGT
        D +       E E EF+ L Q TL                                           L RPTT+A A+  A ++DKD++   Q  Q+VG 
Subjt:  DRFGCCFADVELEAEFISLVQGTL-------------------------------------------LGRPTTFATALASARMLDKDILRMEQ-SQEVGT

Query:  SSSAKKKHEVEVPATSQKVRRSP
        SS  K+K  V   ++SQ  + SP
Subjt:  SSSAKKKHEVEVPATSQKVRRSP

XP_022155000.1 uncharacterized protein LOC111022144 [Momordica charantia]1.0e-1330.41Show/hide
Query:  DVKFIKSFMKAKPPSFDGHSESSEVVVEWTAALEAIFQFLGADAQQRVQEAAFMLKAYARTWWNVVGQTENRPESPISLSGFKGHVRDRFGCCFADVELE
        +  FIK F +  PP+FDG SE +    EW   LEA + +LG + Q +V+ A FML+  A  WW+ +   E+     I  + FK  + D +         E
Subjt:  DVKFIKSFMKAKPPSFDGHSESSEVVVEWTAALEAIFQFLGADAQQRVQEAAFMLKAYARTWWNVVGQTENRPESPISLSGFKGHVRDRFGCCFADVELE

Query:  AEFISLVQGTL-------------------------------------------LGRPTTFATALASARMLDKDILRMEQS-QEVGTSSSAKKK
        AEF+ LVQGTL                                           L RP ++A A+  A ++DKD+     S  EVG+SS  K+K
Subjt:  AEFISLVQGTL-------------------------------------------LGRPTTFATALASARMLDKDILRMEQS-QEVGTSSSAKKK

XP_022156326.1 uncharacterized protein LOC111023247 [Momordica charantia]3.7e-1632.47Show/hide
Query:  DVKFIKSFMKAKPPSFDGHSESSEVVVEWTAALEAIFQFLGADAQQRVQEAAFMLKAYARTWWNVVGQTENRPESPISLSGFKGHVRDRFGCCFADVELE
        + +FIK F +  PP+FDG SE +  V EW   LEA++ +LG + Q +V+ A FML+  A  WW+ V   E+    PI  + FK  + D +         E
Subjt:  DVKFIKSFMKAKPPSFDGHSESSEVVVEWTAALEAIFQFLGADAQQRVQEAAFMLKAYARTWWNVVGQTENRPESPISLSGFKGHVRDRFGCCFADVELE

Query:  AEFISLVQGTL-------------------------------------------LGRPTTFATALASARMLDKDIL-RMEQSQEVGTSSSAKKK
        AEF+ LVQGTL                                           L RPTT+A A+  A ++DKD+  +     EVG+SS  K+K
Subjt:  AEFISLVQGTL-------------------------------------------LGRPTTFATALASARMLDKDIL-RMEQSQEVGTSSSAKKK

XP_022156546.1 uncharacterized protein LOC111023424 [Momordica charantia]5.3e-1529.22Show/hide
Query:  AIPNNLQHIGA--NEAPAH----GVDVKFIKSFMKAKPPSFDGHSESSEVVVEWTAALEAIFQFLGADAQQRVQEAAFMLKAYARTWWNVVGQTENRPES
        A+ NN   +G    + P H      + +FIK F +  PP+F G SE + +  EW   LEA++ +LG + Q +V+ A FML++ A  WW+ V  TE+    
Subjt:  AIPNNLQHIGA--NEAPAH----GVDVKFIKSFMKAKPPSFDGHSESSEVVVEWTAALEAIFQFLGADAQQRVQEAAFMLKAYARTWWNVVGQTENRPES

Query:  PISLSGFKGHVRDRFGCCFADVELEAEFISLVQGTL-------------------------------------------LGRPTTFATALASARMLDKDI
        P+  + FK  + D +     +   E EF+ LVQGTL                                           L RP T+A A+    ++DKD+
Subjt:  PISLSGFKGHVRDRFGCCFADVELEAEFISLVQGTL-------------------------------------------LGRPTTFATALASARMLDKDI

Query:  L-RMEQSQEVGTSSSAKKK
          R++   EVG+S   K+K
Subjt:  L-RMEQSQEVGTSSSAKKK

XP_022158749.1 uncharacterized protein LOC111025213 [Momordica charantia]5.8e-1439.64Show/hide
Query:  DVKFIKSFMKAKPPSFDGHSESSEVVVEWTAALEAIFQFLGADAQQRVQEAAFMLKAYARTWWNVVGQTENRPESPISLSGFKGHVRDRFGCCFADVELE
        + +FIK F +  PP+FDG SE +    EW   LEA++ +LG + Q +V+ A FML+  A  WW+ V   E+    PI  + FK  + D +         E
Subjt:  DVKFIKSFMKAKPPSFDGHSESSEVVVEWTAALEAIFQFLGADAQQRVQEAAFMLKAYARTWWNVVGQTENRPESPISLSGFKGHVRDRFGCCFADVELE

Query:  AEFISLVQGTL
        AEF+ LVQGTL
Subjt:  AEFISLVQGTL

TrEMBL top hitse value%identityAlignment
A0A6J1DCW8 uncharacterized protein LOC1110196037.9e-1730.94Show/hide
Query:  QHIGANEAPAHGVDVKFIKSFMKAKPPSFDGHSESSEVVVEWTAALEAIFQFLGADAQQRVQEAAFMLKAYARTWWNVVGQTENRPESPISLSGFKGHVR
        Q +   +A A   + +FI+ F +  PP+F+G SE + VV EW   LEA++ +LG   Q +V+ A FML+  A  WW+VV   E+    PI+ +  K  + 
Subjt:  QHIGANEAPAHGVDVKFIKSFMKAKPPSFDGHSESSEVVVEWTAALEAIFQFLGADAQQRVQEAAFMLKAYARTWWNVVGQTENRPESPISLSGFKGHVR

Query:  DRFGCCFADVELEAEFISLVQGTL-------------------------------------------LGRPTTFATALASARMLDKDILRMEQ-SQEVGT
        D +       E E EF+ L Q TL                                           L RPTT+A A+  A ++DKD++   Q  Q+VG 
Subjt:  DRFGCCFADVELEAEFISLVQGTL-------------------------------------------LGRPTTFATALASARMLDKDILRMEQ-SQEVGT

Query:  SSSAKKKHEVEVPATSQKVRRSP
        SS  K+K  V   ++SQ  + SP
Subjt:  SSSAKKKHEVEVPATSQKVRRSP

A0A6J1DL73 uncharacterized protein LOC1110221444.8e-1430.41Show/hide
Query:  DVKFIKSFMKAKPPSFDGHSESSEVVVEWTAALEAIFQFLGADAQQRVQEAAFMLKAYARTWWNVVGQTENRPESPISLSGFKGHVRDRFGCCFADVELE
        +  FIK F +  PP+FDG SE +    EW   LEA + +LG + Q +V+ A FML+  A  WW+ +   E+     I  + FK  + D +         E
Subjt:  DVKFIKSFMKAKPPSFDGHSESSEVVVEWTAALEAIFQFLGADAQQRVQEAAFMLKAYARTWWNVVGQTENRPESPISLSGFKGHVRDRFGCCFADVELE

Query:  AEFISLVQGTL-------------------------------------------LGRPTTFATALASARMLDKDILRMEQS-QEVGTSSSAKKK
        AEF+ LVQGTL                                           L RP ++A A+  A ++DKD+     S  EVG+SS  K+K
Subjt:  AEFISLVQGTL-------------------------------------------LGRPTTFATALASARMLDKDILRMEQS-QEVGTSSSAKKK

A0A6J1DUM2 uncharacterized protein LOC1110232471.8e-1632.47Show/hide
Query:  DVKFIKSFMKAKPPSFDGHSESSEVVVEWTAALEAIFQFLGADAQQRVQEAAFMLKAYARTWWNVVGQTENRPESPISLSGFKGHVRDRFGCCFADVELE
        + +FIK F +  PP+FDG SE +  V EW   LEA++ +LG + Q +V+ A FML+  A  WW+ V   E+    PI  + FK  + D +         E
Subjt:  DVKFIKSFMKAKPPSFDGHSESSEVVVEWTAALEAIFQFLGADAQQRVQEAAFMLKAYARTWWNVVGQTENRPESPISLSGFKGHVRDRFGCCFADVELE

Query:  AEFISLVQGTL-------------------------------------------LGRPTTFATALASARMLDKDIL-RMEQSQEVGTSSSAKKK
        AEF+ LVQGTL                                           L RPTT+A A+  A ++DKD+  +     EVG+SS  K+K
Subjt:  AEFISLVQGTL-------------------------------------------LGRPTTFATALASARMLDKDIL-RMEQSQEVGTSSSAKKK

A0A6J1DVA0 uncharacterized protein LOC1110234242.6e-1529.22Show/hide
Query:  AIPNNLQHIGA--NEAPAH----GVDVKFIKSFMKAKPPSFDGHSESSEVVVEWTAALEAIFQFLGADAQQRVQEAAFMLKAYARTWWNVVGQTENRPES
        A+ NN   +G    + P H      + +FIK F +  PP+F G SE + +  EW   LEA++ +LG + Q +V+ A FML++ A  WW+ V  TE+    
Subjt:  AIPNNLQHIGA--NEAPAH----GVDVKFIKSFMKAKPPSFDGHSESSEVVVEWTAALEAIFQFLGADAQQRVQEAAFMLKAYARTWWNVVGQTENRPES

Query:  PISLSGFKGHVRDRFGCCFADVELEAEFISLVQGTL-------------------------------------------LGRPTTFATALASARMLDKDI
        P+  + FK  + D +     +   E EF+ LVQGTL                                           L RP T+A A+    ++DKD+
Subjt:  PISLSGFKGHVRDRFGCCFADVELEAEFISLVQGTL-------------------------------------------LGRPTTFATALASARMLDKDI

Query:  L-RMEQSQEVGTSSSAKKK
          R++   EVG+S   K+K
Subjt:  L-RMEQSQEVGTSSSAKKK

A0A6J1E0B4 uncharacterized protein LOC1110252132.8e-1439.64Show/hide
Query:  DVKFIKSFMKAKPPSFDGHSESSEVVVEWTAALEAIFQFLGADAQQRVQEAAFMLKAYARTWWNVVGQTENRPESPISLSGFKGHVRDRFGCCFADVELE
        + +FIK F +  PP+FDG SE +    EW   LEA++ +LG + Q +V+ A FML+  A  WW+ V   E+    PI  + FK  + D +         E
Subjt:  DVKFIKSFMKAKPPSFDGHSESSEVVVEWTAALEAIFQFLGADAQQRVQEAAFMLKAYARTWWNVVGQTENRPESPISLSGFKGHVRDRFGCCFADVELE

Query:  AEFISLVQGTL
        AEF+ LVQGTL
Subjt:  AEFISLVQGTL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCATGGCAATGCAATCCCGAACAACCTGCAACACATCGGTGCAAACGAAGCCCCTGCTCATGGCGTAGATGTGAAGTTTATTAAGAGCTTCATGAAGGCGAAGCCTCC
TTCATTCGATGGACACTCGGAAAGTTCTGAAGTAGTGGTAGAATGGACTGCCGCGTTGGAAGCGATATTTCAATTTCTTGGAGCTGATGCCCAGCAACGGGTTCAAGAAG
CTGCCTTTATGCTCAAAGCCTACGCTCGCACATGGTGGAACGTAGTGGGTCAAACCGAGAACCGCCCAGAGAGTCCCATTTCCTTGTCAGGGTTCAAAGGTCATGTGCGA
GACCGTTTTGGCTGTTGTTTTGCTGATGTTGAGCTCGAAGCGGAGTTCATCTCACTTGTTCAAGGGACGTTGCTGGGTCGACCAACGACATTCGCAACAGCTCTAGCGAG
CGCTCGAATGTTGGATAAGGACATCCTCAGGATGGAACAGTCCCAAGAGGTTGGCACGTCGTCTAGTGCCAAGAAGAAGCACGAAGTGGAAGTGCCTGCAACTAGTCAAA
AGGTTAGAAGATCTCCGTCAGGATTTAGTGCGTGCACTGAGGAGTTCTTGCCTTGTGTCACCGATGAGGAGCTCAAGGCAGAATACCCAGAGCTTTACGATGTCGATGAT
TCTGATGATGAAGATAGCTCCTAA
mRNA sequenceShow/hide mRNA sequence
ATGCATGGCAATGCAATCCCGAACAACCTGCAACACATCGGTGCAAACGAAGCCCCTGCTCATGGCGTAGATGTGAAGTTTATTAAGAGCTTCATGAAGGCGAAGCCTCC
TTCATTCGATGGACACTCGGAAAGTTCTGAAGTAGTGGTAGAATGGACTGCCGCGTTGGAAGCGATATTTCAATTTCTTGGAGCTGATGCCCAGCAACGGGTTCAAGAAG
CTGCCTTTATGCTCAAAGCCTACGCTCGCACATGGTGGAACGTAGTGGGTCAAACCGAGAACCGCCCAGAGAGTCCCATTTCCTTGTCAGGGTTCAAAGGTCATGTGCGA
GACCGTTTTGGCTGTTGTTTTGCTGATGTTGAGCTCGAAGCGGAGTTCATCTCACTTGTTCAAGGGACGTTGCTGGGTCGACCAACGACATTCGCAACAGCTCTAGCGAG
CGCTCGAATGTTGGATAAGGACATCCTCAGGATGGAACAGTCCCAAGAGGTTGGCACGTCGTCTAGTGCCAAGAAGAAGCACGAAGTGGAAGTGCCTGCAACTAGTCAAA
AGGTTAGAAGATCTCCGTCAGGATTTAGTGCGTGCACTGAGGAGTTCTTGCCTTGTGTCACCGATGAGGAGCTCAAGGCAGAATACCCAGAGCTTTACGATGTCGATGAT
TCTGATGATGAAGATAGCTCCTAA
Protein sequenceShow/hide protein sequence
MHGNAIPNNLQHIGANEAPAHGVDVKFIKSFMKAKPPSFDGHSESSEVVVEWTAALEAIFQFLGADAQQRVQEAAFMLKAYARTWWNVVGQTENRPESPISLSGFKGHVR
DRFGCCFADVELEAEFISLVQGTLLGRPTTFATALASARMLDKDILRMEQSQEVGTSSSAKKKHEVEVPATSQKVRRSPSGFSACTEEFLPCVTDEELKAEYPELYDVDD
SDDEDSS