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Lag0022430 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0022430
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase
Genome locationchr7:28309476..28309877
RNA-Seq ExpressionLag0022430
SyntenyLag0022430
Gene Ontology termsGO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022155925.1 uncharacterized protein LOC111022925 [Momordica charantia]2.4e-2860Show/hide
Query:  EESQFIRDLKRYGPPSFDRQSENPVAAERWVADLEALFDLMNCNDPLKIKEAVFMLKDDARMRWKSVAAAEDHANQPISWERFKDLLYDYYFPETIKDDK
        EE QFIRD KR+GPP F+  SE P AAE WV +LEAL+  + C+D  K++ AVFML+ +A   W+SVAAAEDHAN P++W RFKDLLY+YYFP T++++K
Subjt:  EESQFIRDLKRYGPPSFDRQSENPVAAERWVADLEALFDLMNCNDPLKIKEAVFMLKDDARMRWKSVAAAEDHANQPISWERFKDLLYDYYFPETIKDDK

XP_022156330.1 uncharacterized protein LOC111023250 [Momordica charantia]8.4e-2957.02Show/hide
Query:  VRPPRNRNWVPENVEESQFIRDLKRYGPPSFDRQSENPVAAERWVADLEALFDLMNCNDPLKIKEAVFMLKDDARMRWKSVAAAEDHANQPISWERFKDL
        + PPR+ +  P++  E+QFI+D KRYGPP+FD  S+    AE WV +LEAL+  + C D  K+K AVFML+  A   W SVAAAEDHAN P++W RFKDL
Subjt:  VRPPRNRNWVPENVEESQFIRDLKRYGPPSFDRQSENPVAAERWVADLEALFDLMNCNDPLKIKEAVFMLKDDARMRWKSVAAAEDHANQPISWERFKDL

Query:  LYDYYFPETIKDDK
        LYDYY+PET+KD K
Subjt:  LYDYYFPETIKDDK

XP_022158637.1 uncharacterized protein LOC111025088 [Momordica charantia]1.1e-2857.14Show/hide
Query:  PPRNRNWVPENVEESQFIRDLKRYGPPSFDRQSENPVAAERWVADLEALFDLMNCNDPLKIKEAVFMLKDDARMRWKSVAAAEDHANQPISWERFKDLLY
        PPR+ +  P++  E+QFI+D KRYGPP+FD  SE   AAE WV +LEAL+  + C D  K+K  VFML+ +A   W S+A AEDHAN P+ W RFKDLLY
Subjt:  PPRNRNWVPENVEESQFIRDLKRYGPPSFDRQSENPVAAERWVADLEALFDLMNCNDPLKIKEAVFMLKDDARMRWKSVAAAEDHANQPISWERFKDLLY

Query:  DYYFPETIKDDK
        DYY+PET+KD K
Subjt:  DYYFPETIKDDK

XP_022158749.1 uncharacterized protein LOC111025213 [Momordica charantia]1.9e-2859.05Show/hide
Query:  VPENVEESQFIRDLKRYGPPSFDRQSENPVAAERWVADLEALFDLMNCNDPLKIKEAVFMLKDDARMRWKSVAAAEDHANQPISWERFKDLLYDYYFPET
        VP++  E++FI+D KRYGPP+FD +SE   AAE W+ +LEAL+  + C D  K+K AVFML+ +A   W SVAAAEDHAN PI W RFK+LLYDYY+PE 
Subjt:  VPENVEESQFIRDLKRYGPPSFDRQSENPVAAERWVADLEALFDLMNCNDPLKIKEAVFMLKDDARMRWKSVAAAEDHANQPISWERFKDLLYDYYFPET

Query:  IKDDK
        +KD K
Subjt:  IKDDK

XP_022159307.1 uncharacterized protein LOC111025716, partial [Momordica charantia]1.4e-2858.41Show/hide
Query:  RPPRNRNWVPENVEESQFIRDLKRYGPPSFDRQSENPVAAERWVADLEALFDLMNCNDPLKIKEAVFMLKDDARMRWKSVAAAEDHANQPISWERFKDLL
        +PPR+ +  P++  E+QFI+D KRYGPP+FD  SE   AAE WV +LEAL+  + C D  K K AVFML+ +A   W SV AAEDHAN P +W RFKDLL
Subjt:  RPPRNRNWVPENVEESQFIRDLKRYGPPSFDRQSENPVAAERWVADLEALFDLMNCNDPLKIKEAVFMLKDDARMRWKSVAAAEDHANQPISWERFKDLL

Query:  YDYYFPETIKDDK
        YDYY+PET+KD K
Subjt:  YDYYFPETIKDDK

TrEMBL top hitse value%identityAlignment
A0A6J1DNV8 uncharacterized protein LOC1110229251.2e-2860Show/hide
Query:  EESQFIRDLKRYGPPSFDRQSENPVAAERWVADLEALFDLMNCNDPLKIKEAVFMLKDDARMRWKSVAAAEDHANQPISWERFKDLLYDYYFPETIKDDK
        EE QFIRD KR+GPP F+  SE P AAE WV +LEAL+  + C+D  K++ AVFML+ +A   W+SVAAAEDHAN P++W RFKDLLY+YYFP T++++K
Subjt:  EESQFIRDLKRYGPPSFDRQSENPVAAERWVADLEALFDLMNCNDPLKIKEAVFMLKDDARMRWKSVAAAEDHANQPISWERFKDLLYDYYFPETIKDDK

A0A6J1DQ01 uncharacterized protein LOC1110232504.1e-2957.02Show/hide
Query:  VRPPRNRNWVPENVEESQFIRDLKRYGPPSFDRQSENPVAAERWVADLEALFDLMNCNDPLKIKEAVFMLKDDARMRWKSVAAAEDHANQPISWERFKDL
        + PPR+ +  P++  E+QFI+D KRYGPP+FD  S+    AE WV +LEAL+  + C D  K+K AVFML+  A   W SVAAAEDHAN P++W RFKDL
Subjt:  VRPPRNRNWVPENVEESQFIRDLKRYGPPSFDRQSENPVAAERWVADLEALFDLMNCNDPLKIKEAVFMLKDDARMRWKSVAAAEDHANQPISWERFKDL

Query:  LYDYYFPETIKDDK
        LYDYY+PET+KD K
Subjt:  LYDYYFPETIKDDK

A0A6J1DXQ7 uncharacterized protein LOC1110250885.3e-2957.14Show/hide
Query:  PPRNRNWVPENVEESQFIRDLKRYGPPSFDRQSENPVAAERWVADLEALFDLMNCNDPLKIKEAVFMLKDDARMRWKSVAAAEDHANQPISWERFKDLLY
        PPR+ +  P++  E+QFI+D KRYGPP+FD  SE   AAE WV +LEAL+  + C D  K+K  VFML+ +A   W S+A AEDHAN P+ W RFKDLLY
Subjt:  PPRNRNWVPENVEESQFIRDLKRYGPPSFDRQSENPVAAERWVADLEALFDLMNCNDPLKIKEAVFMLKDDARMRWKSVAAAEDHANQPISWERFKDLLY

Query:  DYYFPETIKDDK
        DYY+PET+KD K
Subjt:  DYYFPETIKDDK

A0A6J1DZH0 uncharacterized protein LOC1110257166.9e-2958.41Show/hide
Query:  RPPRNRNWVPENVEESQFIRDLKRYGPPSFDRQSENPVAAERWVADLEALFDLMNCNDPLKIKEAVFMLKDDARMRWKSVAAAEDHANQPISWERFKDLL
        +PPR+ +  P++  E+QFI+D KRYGPP+FD  SE   AAE WV +LEAL+  + C D  K K AVFML+ +A   W SV AAEDHAN P +W RFKDLL
Subjt:  RPPRNRNWVPENVEESQFIRDLKRYGPPSFDRQSENPVAAERWVADLEALFDLMNCNDPLKIKEAVFMLKDDARMRWKSVAAAEDHANQPISWERFKDLL

Query:  YDYYFPETIKDDK
        YDYY+PET+KD K
Subjt:  YDYYFPETIKDDK

A0A6J1E0B4 uncharacterized protein LOC1110252139.0e-2959.05Show/hide
Query:  VPENVEESQFIRDLKRYGPPSFDRQSENPVAAERWVADLEALFDLMNCNDPLKIKEAVFMLKDDARMRWKSVAAAEDHANQPISWERFKDLLYDYYFPET
        VP++  E++FI+D KRYGPP+FD +SE   AAE W+ +LEAL+  + C D  K+K AVFML+ +A   W SVAAAEDHAN PI W RFK+LLYDYY+PE 
Subjt:  VPENVEESQFIRDLKRYGPPSFDRQSENPVAAERWVADLEALFDLMNCNDPLKIKEAVFMLKDDARMRWKSVAAAEDHANQPISWERFKDLLYDYYFPET

Query:  IKDDK
        +KD K
Subjt:  IKDDK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGACAATTACGGTTCCGTGGTGGCCTGGCATTTCTCTGGGCTTCCAAAGAAATGTCAGGCCACCACGGAACCGTAATTGGGTACCTGAGAATGTAGAGGAATCCCA
GTTCATTAGGGACTTAAAGCGCTATGGGCCTCCCTCTTTTGACAGGCAGTCCGAGAATCCTGTGGCAGCAGAGCGGTGGGTCGCTGATTTAGAGGCACTGTTTGACCTCA
TGAACTGTAATGATCCCCTGAAGATTAAAGAAGCAGTCTTTATGCTCAAGGATGATGCTCGCATGCGGTGGAAGTCTGTGGCAGCCGCCGAAGATCATGCTAATCAGCCG
ATTTCATGGGAAAGGTTCAAAGACCTGTTGTACGATTATTACTTCCCAGAGACAATCAAAGATGACAAATAA
mRNA sequenceShow/hide mRNA sequence
ATGTTGACAATTACGGTTCCGTGGTGGCCTGGCATTTCTCTGGGCTTCCAAAGAAATGTCAGGCCACCACGGAACCGTAATTGGGTACCTGAGAATGTAGAGGAATCCCA
GTTCATTAGGGACTTAAAGCGCTATGGGCCTCCCTCTTTTGACAGGCAGTCCGAGAATCCTGTGGCAGCAGAGCGGTGGGTCGCTGATTTAGAGGCACTGTTTGACCTCA
TGAACTGTAATGATCCCCTGAAGATTAAAGAAGCAGTCTTTATGCTCAAGGATGATGCTCGCATGCGGTGGAAGTCTGTGGCAGCCGCCGAAGATCATGCTAATCAGCCG
ATTTCATGGGAAAGGTTCAAAGACCTGTTGTACGATTATTACTTCCCAGAGACAATCAAAGATGACAAATAA
Protein sequenceShow/hide protein sequence
MLTITVPWWPGISLGFQRNVRPPRNRNWVPENVEESQFIRDLKRYGPPSFDRQSENPVAAERWVADLEALFDLMNCNDPLKIKEAVFMLKDDARMRWKSVAAAEDHANQP
ISWERFKDLLYDYYFPETIKDDK