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Lag0022431 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0022431
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionUnknown protein
Genome locationchr7:28328011..28328764
RNA-Seq ExpressionLag0022431
SyntenyLag0022431
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
WP_217833153.1 retrotransposon gag domain-containing protein, partial [Synechococcus sp. PCC 7002]1.8e-0529.36Show/hide
Query:  DWPSERSTPK-KIAAGVFEVDKVSALQAQMTSLANAFMKFSGTGSAQ----SIESATALAS----RPEEET-----------------------------
        +WP ER++P    AAG++EVD+V++L+AQM SL NA  K +  G AQ    SI S  ALAS      + ET                             
Subjt:  DWPSERSTPK-KIAAGVFEVDKVSALQAQMTSLANAFMKFSGTGSAQ----SIESATALAS----RPEEET-----------------------------

Query:  -----------------------------------IEQSSIKTTKLEEAVIAINSTVNGHSVAIKNIETQLGQLVNVVSTMNKGTTPAEQEKTQMEYCKA
                                           +++S  +TT LE +V AI STV     A++N+E QL Q+   + TM KG  P+  E    E CKA
Subjt:  -----------------------------------IEQSSIKTTKLEEAVIAINSTVNGHSVAIKNIETQLGQLVNVVSTMNKGTTPAEQEKTQMEYCKA

Query:  ITMHQEEAEEEPEFEDYD
        +T+   +    P   D D
Subjt:  ITMHQEEAEEEPEFEDYD

XP_022157708.1 uncharacterized protein LOC111024361 [Momordica charantia]4.0e-1332.26Show/hide
Query:  WPSERSTPKKIAAGVFEVDKVSALQAQMTSLANAFMKFSGTGSAQSIESATA---------------LASRPEEET----------IEQSSIKTTKLEEA
        WPSERS  KK+ AG++E+D++S+L+AQ+ +L NA  K SG G++ S E   A                 S P E+           I +   + +++E  
Subjt:  WPSERSTPKKIAAGVFEVDKVSALQAQMTSLANAFMKFSGTGSAQSIESATA---------------LASRPEEET----------IEQSSIKTTKLEEA

Query:  VIAINSTVNGHSVAIKNIETQLGQLVNVVSTMNKGTTPAEQEKTQMEYCKAITMHQEEAEEEPEFEDYDTPIGETEEDTSSDEAEK
        V  +   + G++ +IKN+E Q+GQ+   ++TM KG  P++ E    E+CKA+T+   +  +EPE +  + P+  TEE  + +E  K
Subjt:  VIAINSTVNGHSVAIKNIETQLGQLVNVVSTMNKGTTPAEQEKTQMEYCKAITMHQEEAEEEPEFEDYDTPIGETEEDTSSDEAEK

XP_022874214.1 uncharacterized protein LOC111393042 [Olea europaea var. sylvestris]7.6e-0427.87Show/hide
Query:  WPSERSTPKKIAAGVFEVDKVSALQAQMTSLANAFMKFSGTGSAQSIESATALAS--------------------------RPEEETIEQSSIKTT----
        WPSER + KK AAG+ EVD ++AL AQ+ SL N  +  +  G+ Q ++S   L +                          +P  E I  +SI  T    
Subjt:  WPSERSTPKKIAAGVFEVDKVSALQAQMTSLANAFMKFSGTGSAQSIESATALAS--------------------------RPEEETIEQSSIKTT----

Query:  -KLEEAVIAINSTVNGHSVAIKNIETQLGQLVNVVSTMNKGTTPAEQEKTQMEYCKAITMHQEEAEEEPEFEDYDTPIGETEE
         K+E  +  I + V+     +KN+E Q+GQL   + +  +G    + E    E+CKA+ +       E E  +   P  + E+
Subjt:  -KLEEAVIAINSTVNGHSVAIKNIETQLGQLVNVVSTMNKGTTPAEQEKTQMEYCKAITMHQEEAEEEPEFEDYDTPIGETEE

TrEMBL top hitse value%identityAlignment
A0A6J1DU19 uncharacterized protein LOC1110243612.0e-1332.26Show/hide
Query:  WPSERSTPKKIAAGVFEVDKVSALQAQMTSLANAFMKFSGTGSAQSIESATA---------------LASRPEEET----------IEQSSIKTTKLEEA
        WPSERS  KK+ AG++E+D++S+L+AQ+ +L NA  K SG G++ S E   A                 S P E+           I +   + +++E  
Subjt:  WPSERSTPKKIAAGVFEVDKVSALQAQMTSLANAFMKFSGTGSAQSIESATA---------------LASRPEEET----------IEQSSIKTTKLEEA

Query:  VIAINSTVNGHSVAIKNIETQLGQLVNVVSTMNKGTTPAEQEKTQMEYCKAITMHQEEAEEEPEFEDYDTPIGETEEDTSSDEAEK
        V  +   + G++ +IKN+E Q+GQ+   ++TM KG  P++ E    E+CKA+T+   +  +EPE +  + P+  TEE  + +E  K
Subjt:  VIAINSTVNGHSVAIKNIETQLGQLVNVVSTMNKGTTPAEQEKTQMEYCKAITMHQEEAEEEPEFEDYDTPIGETEEDTSSDEAEK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTGGACTGGCCATCAGAGCGGTCTACTCCTAAAAAGATTGCTGCTGGAGTGTTTGAGGTTGATAAAGTAAGTGCACTCCAGGCCCAGATGACCTCCCTTGCTAATGC
TTTTATGAAATTTTCAGGTACAGGGAGTGCACAGTCAATTGAATCAGCTACTGCTTTAGCATCTAGACCTGAGGAAGAGACCATCGAGCAGTCTAGTATCAAGACAACTA
AATTGGAGGAGGCAGTCATTGCCATCAACTCAACAGTGAATGGCCACAGTGTTGCCATCAAGAATATTGAGACTCAGTTGGGACAGTTGGTAAATGTTGTAAGCACCATG
AATAAAGGTACGACCCCAGCTGAGCAAGAGAAAACACAGATGGAGTACTGTAAGGCAATCACTATGCACCAGGAGGAAGCTGAAGAGGAACCTGAGTTTGAGGATTATGA
CACACCTATAGGGGAAACTGAGGAGGACACGTCATCAGATGAGGCTGAAAAGCCTAAACCTGAACCTTTTATTCCTTCTCCAACACTGATGGTTCCGAAAGAAAAGAAAA
AGAAAAAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGCTGGACTGGCCATCAGAGCGGTCTACTCCTAAAAAGATTGCTGCTGGAGTGTTTGAGGTTGATAAAGTAAGTGCACTCCAGGCCCAGATGACCTCCCTTGCTAATGC
TTTTATGAAATTTTCAGGTACAGGGAGTGCACAGTCAATTGAATCAGCTACTGCTTTAGCATCTAGACCTGAGGAAGAGACCATCGAGCAGTCTAGTATCAAGACAACTA
AATTGGAGGAGGCAGTCATTGCCATCAACTCAACAGTGAATGGCCACAGTGTTGCCATCAAGAATATTGAGACTCAGTTGGGACAGTTGGTAAATGTTGTAAGCACCATG
AATAAAGGTACGACCCCAGCTGAGCAAGAGAAAACACAGATGGAGTACTGTAAGGCAATCACTATGCACCAGGAGGAAGCTGAAGAGGAACCTGAGTTTGAGGATTATGA
CACACCTATAGGGGAAACTGAGGAGGACACGTCATCAGATGAGGCTGAAAAGCCTAAACCTGAACCTTTTATTCCTTCTCCAACACTGATGGTTCCGAAAGAAAAGAAAA
AGAAAAAGTAG
Protein sequenceShow/hide protein sequence
MLDWPSERSTPKKIAAGVFEVDKVSALQAQMTSLANAFMKFSGTGSAQSIESATALASRPEEETIEQSSIKTTKLEEAVIAINSTVNGHSVAIKNIETQLGQLVNVVSTM
NKGTTPAEQEKTQMEYCKAITMHQEEAEEEPEFEDYDTPIGETEEDTSSDEAEKPKPEPFIPSPTLMVPKEKKKKK