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Lag0022435 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0022435
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionAP-2 complex subunit mu
Genome locationchr7:28637239..28638307
RNA-Seq ExpressionLag0022435
SyntenyLag0022435
Gene Ontology termsGO:0006886 - intracellular protein transport (biological process)
GO:0006897 - endocytosis (biological process)
GO:0005794 - Golgi apparatus (cellular component)
GO:0005905 - clathrin-coated pit (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0030131 - clathrin adaptor complex (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF8412555.1 hypothetical protein HHK36_000523 [Tetracentron sinense]4.9e-0571.11Show/hide
Query:  MKSFLFGRPDLKLGLNDKIGLEKVSQLKSRSSKRFGDLSPHVFAV
        MK FL G PDLKLGLNDKIGLEK SQLKSR +K   DLS   FA+
Subjt:  MKSFLFGRPDLKLGLNDKIGLEKVSQLKSRSSKRFGDLSPHVFAV
KAG1360892.1 AP-2 complex subunit mu [Cocos nucifera]4.9e-0580Show/hide
Query:  MKSFLFGRPDLKLGLNDKIGLEKVSQLKSRSSKRF
        MK FL G PDLKLGLNDKIGLEK SQLKSR +KR+
Subjt:  MKSFLFGRPDLKLGLNDKIGLEKVSQLKSRSSKRF
RZC11987.1 AP-2 complex subunit mu isoform B [Glycine soja]4.9e-0580Show/hide
Query:  MKSFLFGRPDLKLGLNDKIGLEKVSQLKSRSSKRF
        MK FL G PDLKLGLNDKIGLEK +QLKSR +KRF
Subjt:  MKSFLFGRPDLKLGLNDKIGLEKVSQLKSRSSKRF
TQD93575.1 hypothetical protein C1H46_020846 [Malus baccata]1.0e-0580.56Show/hide
Query:  MKSFLFGRPDLKLGLNDKIGLEKVSQLKSRSSKRFG
        MK FL G PDLKLGLNDKIGLEK SQLKSR +KR+G
Subjt:  MKSFLFGRPDLKLGLNDKIGLEKVSQLKSRSSKRFG
XP_021888227.1 LOW QUALITY PROTEIN: AP-2 complex subunit mu [Carica papaya]4.9e-0580Show/hide
Query:  MKSFLFGRPDLKLGLNDKIGLEKVSQLKSRSSKRF
        MK FL G PDLKLGLNDKIGLEK SQLKSR +KR+
Subjt:  MKSFLFGRPDLKLGLNDKIGLEKVSQLKSRSSKRF
TrEMBL top hitse value%identityAlignment
A0A3L6EFF5 AP-2 complex subunit mu4.1e-0569.05Show/hide
Query:  MKSFLFGRPDLKLGLNDKIGLEKVSQLKSRSSKRFGDLSPHV
        MK FL G PDLKLGLNDKIGLEK +QLKSR +KR    + HV
Subjt:  MKSFLFGRPDLKLGLNDKIGLEKVSQLKSRSSKRFGDLSPHV
A0A427AS12 Uncharacterized protein3.1e-0580Show/hide
Query:  MKSFLFGRPDLKLGLNDKIGLEKVSQLKSRSSKRF
        MK FL G PDLKLGLNDKIGLEK SQLKSR+ KR+
Subjt:  MKSFLFGRPDLKLGLNDKIGLEKVSQLKSRSSKRF
A0A445KM56 AP-2 complex subunit mu isoform B2.4e-0580Show/hide
Query:  MKSFLFGRPDLKLGLNDKIGLEKVSQLKSRSSKRF
        MK FL G PDLKLGLNDKIGLEK +QLKSR +KRF
Subjt:  MKSFLFGRPDLKLGLNDKIGLEKVSQLKSRSSKRF
A0A540M4B9 Uncharacterized protein4.8e-0680.56Show/hide
Query:  MKSFLFGRPDLKLGLNDKIGLEKVSQLKSRSSKRFG
        MK FL G PDLKLGLNDKIGLEK SQLKSR +KR+G
Subjt:  MKSFLFGRPDLKLGLNDKIGLEKVSQLKSRSSKRFG
A0A7J0FQ38 Clathrin adaptor complexes medium subunit family protein3.1e-0573.68Show/hide
Query:  MKSFLFGRPDLKLGLNDKIGLEKVSQLKSRSSKRFGDL
        MK FL G PDLKLGLNDKIGLEK S+LKSR +KR+  L
Subjt:  MKSFLFGRPDLKLGLNDKIGLEKVSQLKSRSSKRFGDL
SwissProt top hitse value%identityAlignment
O23140 AP-2 complex subunit mu2.1e-0675.76Show/hide
Query:  MKSFLFGRPDLKLGLNDKIGLEKVSQLKSRSSK
        MK FL G PDLKLGLNDKIGLEK S++KSR +K
Subjt:  MKSFLFGRPDLKLGLNDKIGLEKVSQLKSRSSK
Arabidopsis top hitse value%identityAlignment
AT5G46630.1 Clathrin adaptor complexes medium subunit family protein1.5e-0775.76Show/hide
Query:  MKSFLFGRPDLKLGLNDKIGLEKVSQLKSRSSK
        MK FL G PDLKLGLNDKIGLEK S++KSR +K
Subjt:  MKSFLFGRPDLKLGLNDKIGLEKVSQLKSRSSK
AT5G46630.2 Clathrin adaptor complexes medium subunit family protein1.5e-0775.76Show/hide
Query:  MKSFLFGRPDLKLGLNDKIGLEKVSQLKSRSSK
        MK FL G PDLKLGLNDKIGLEK S++KSR +K
Subjt:  MKSFLFGRPDLKLGLNDKIGLEKVSQLKSRSSK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGTCCTTTCTTTTTGGAAGGCCTGATTTGAAGTTGGGTTTAAATGATAAGATTGGCCTTGAGAAAGTGTCACAGTTGAAGTCCCGTTCAAGTAAAAGATTTGGAGA
CTTGAGTCCTCATGTCTTTGCAGTTGCTGAAGTGGCATATAGTTCCATACAAGCTAGGTTTTGTCTGAATCTTCGTGGAAGAAGAAGTGGGATAATAGACGGGCTTAAGG
TAGTGTTTTGTGGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGTCCTTTCTTTTTGGAAGGCCTGATTTGAAGTTGGGTTTAAATGATAAGATTGGCCTTGAGAAAGTGTCACAGTTGAAGTCCCGTTCAAGTAAAAGATTTGGAGA
CTTGAGTCCTCATGTCTTTGCAGTTGCTGAAGTGGCATATAGTTCCATACAAGCTAGGTTTTGTCTGAATCTTCGTGGAAGAAGAAGTGGGATAATAGACGGGCTTAAGG
TAGTGTTTTGTGGGTGA
Protein sequenceShow/hide protein sequence
MKSFLFGRPDLKLGLNDKIGLEKVSQLKSRSSKRFGDLSPHVFAVAEVAYSSIQARFCLNLRGRRSGIIDGLKVVFCG