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Lag0022437 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0022437
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionGag/pol protein
Genome locationchr7:28753432..28762336
RNA-Seq ExpressionLag0022437
SyntenyLag0022437
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK27885.1 retrovirus-related pol polyprotein from transposon tnt 1-94 [Cucumis melo var. makuwa]7.2e-0565Show/hide
Query:  PTQYAFLFWDKTEWEDGDMTTQEGIHSFPLLGEVDECSLK
        PTQYA+ F DKTEW  G++ TQ+GIH FP LG VD+CSL+
Subjt:  PTQYAFLFWDKTEWEDGDMTTQEGIHSFPLLGEVDECSLK
TYK30754.1 gag/pol protein [Cucumis melo var. makuwa]3.2e-0553.19Show/hide
Query:  MGESGHTPTQYAFLFWDKTEWEDGDMTTQEGIHSFPLLGEVDECSLK
        +G+SG         FWDKT+W  G++ TQ+GIHSFP LG+VD+C LK
Subjt:  MGESGHTPTQYAFLFWDKTEWEDGDMTTQEGIHSFPLLGEVDECSLK
TrEMBL top hitse value%identityAlignment
A0A5D3DX33 Retrovirus-related pol polyprotein from transposon tnt 1-943.5e-0565Show/hide
Query:  PTQYAFLFWDKTEWEDGDMTTQEGIHSFPLLGEVDECSLK
        PTQYA+ F DKTEW  G++ TQ+GIH FP LG VD+CSL+
Subjt:  PTQYAFLFWDKTEWEDGDMTTQEGIHSFPLLGEVDECSLK
A0A5D3E4C4 Gag/pol protein1.6e-0553.19Show/hide
Query:  MGESGHTPTQYAFLFWDKTEWEDGDMTTQEGIHSFPLLGEVDECSLK
        +G+SG         FWDKT+W  G++ TQ+GIHSFP LG+VD+C LK
Subjt:  MGESGHTPTQYAFLFWDKTEWEDGDMTTQEGIHSFPLLGEVDECSLK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTGAGAGTGGCCATACGCCGACTCAATATGCCTTCCTTTTTTGGGACAAGACCGAGTGGGAGGATGGGGACATGACAACACAAGAAGGAATTCACTCCTTCCCGCT
TCTAGGAGAAGTAGATGAGTGTTCCCTTAAGTGCGCCGCCGCTTCCGTTCGGCCAGCCCTCGTCGCGTCGTTGTTCGAGCGTGAGTCTTCTCGTCTTGTTGGTCGCGGAT
CTCCCTCTCTCTGCGCGTCTCTCTCCCTTCGCAGATCTCTCTCTCTCGGCGGTCTCTCCCTCTCTTCCTCGTGCGTGAAGCCCCAGCCGCCGGTTTCCGCTTGCAGCCGA
GCGCACAGTCCGTGGTGCTGCCGTCGCGCGCTTGCTCGGCCCGATCTAAGAGTTCTAGCTTTGTCGTGGTTAGATCTGCGCGGACAGCAGCGTGAAGCACCGTCTCCTCC
GCGTTTCAGCCTTAAAGATCTCGCGTGTCAAGCGATTCGGAGCCCTGTCGTTCCGTTTCAGTCGATTCCGCCTCTGTCCAGCAACGTCTCGGCTGTTGTTGGTGTCGTTT
GCGTTTCCGGCTCGAGTAGTGTTGTCCAATCTCTAGGAGCCCTTGAATCTCTAAATACACTTTTTGTGCTTGCTGTCCAGCGGTTGAAAAGCCTTAAATATGGTCGTTCA
ACGTTACCCATGGCCCGTTGTGCCTTAGACATGGTTGCCCATGGACTTAAGCTTTTGGGTTTTCAGTTTGGGAATGCTGAAGGCTGTTTGGAGTTCATCTTGGCTGCTTT
AAGCTGGTTGGAGTTGCTTAGGAGCGCTATAGGTATCGAGGATGATCCGGACCTTGGTGGCGAGGAGGAGAACTGCGAGGAAAGATTCCTAGGGTGTGTGAAAAAAAATG
GTTCAGGCCATTTTACGCCGTTATGCTGCCGAAATTTTCGAAGATCAATTGGTGGTGTCCCAATTGTTGACGCTCGGTCCAAAATCAATAAAGGCATTGAATTATTCAGA
GTCGTCAACGGAGGTCCATCAGGTCCCACCGGTAGCTCTATAAGGGCGTTGAGATTCCATGGAGAATACTGGTGTAACTCCGTGGTGGTGTTCATAGGAGGTTTGCTACA
TCAAAAGTTGAGATCTAGGTGCTGTATTTTCTTCACTCCACTTGGGAATTTGGCAAAGCGATTCAAGAATTCTACAAAGTGTGGTATTCTGAATGTTTCCGCTGCGCTAG
GGCTTTTATCCCTGCAGCGTCAACAATTGGGACACCACCAATTGATCTTCCCCACTATGACTCTGAGATTAGGAACGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGTGAGAGTGGCCATACGCCGACTCAATATGCCTTCCTTTTTTGGGACAAGACCGAGTGGGAGGATGGGGACATGACAACACAAGAAGGAATTCACTCCTTCCCGCT
TCTAGGAGAAGTAGATGAGTGTTCCCTTAAGTGCGCCGCCGCTTCCGTTCGGCCAGCCCTCGTCGCGTCGTTGTTCGAGCGTGAGTCTTCTCGTCTTGTTGGTCGCGGAT
CTCCCTCTCTCTGCGCGTCTCTCTCCCTTCGCAGATCTCTCTCTCTCGGCGGTCTCTCCCTCTCTTCCTCGTGCGTGAAGCCCCAGCCGCCGGTTTCCGCTTGCAGCCGA
GCGCACAGTCCGTGGTGCTGCCGTCGCGCGCTTGCTCGGCCCGATCTAAGAGTTCTAGCTTTGTCGTGGTTAGATCTGCGCGGACAGCAGCGTGAAGCACCGTCTCCTCC
GCGTTTCAGCCTTAAAGATCTCGCGTGTCAAGCGATTCGGAGCCCTGTCGTTCCGTTTCAGTCGATTCCGCCTCTGTCCAGCAACGTCTCGGCTGTTGTTGGTGTCGTTT
GCGTTTCCGGCTCGAGTAGTGTTGTCCAATCTCTAGGAGCCCTTGAATCTCTAAATACACTTTTTGTGCTTGCTGTCCAGCGGTTGAAAAGCCTTAAATATGGTCGTTCA
ACGTTACCCATGGCCCGTTGTGCCTTAGACATGGTTGCCCATGGACTTAAGCTTTTGGGTTTTCAGTTTGGGAATGCTGAAGGCTGTTTGGAGTTCATCTTGGCTGCTTT
AAGCTGGTTGGAGTTGCTTAGGAGCGCTATAGGTATCGAGGATGATCCGGACCTTGGTGGCGAGGAGGAGAACTGCGAGGAAAGATTCCTAGGGTGTGTGAAAAAAAATG
GTTCAGGCCATTTTACGCCGTTATGCTGCCGAAATTTTCGAAGATCAATTGGTGGTGTCCCAATTGTTGACGCTCGGTCCAAAATCAATAAAGGCATTGAATTATTCAGA
GTCGTCAACGGAGGTCCATCAGGTCCCACCGGTAGCTCTATAAGGGCGTTGAGATTCCATGGAGAATACTGGTGTAACTCCGTGGTGGTGTTCATAGGAGGTTTGCTACA
TCAAAAGTTGAGATCTAGGTGCTGTATTTTCTTCACTCCACTTGGGAATTTGGCAAAGCGATTCAAGAATTCTACAAAGTGTGGTATTCTGAATGTTTCCGCTGCGCTAG
GGCTTTTATCCCTGCAGCGTCAACAATTGGGACACCACCAATTGATCTTCCCCACTATGACTCTGAGATTAGGAACGTAG
Protein sequenceShow/hide protein sequence
MGESGHTPTQYAFLFWDKTEWEDGDMTTQEGIHSFPLLGEVDECSLKCAAASVRPALVASLFERESSRLVGRGSPSLCASLSLRRSLSLGGLSLSSSCVKPQPPVSACSR
AHSPWCCRRALARPDLRVLALSWLDLRGQQREAPSPPRFSLKDLACQAIRSPVVPFQSIPPLSSNVSAVVGVVCVSGSSSVVQSLGALESLNTLFVLAVQRLKSLKYGRS
TLPMARCALDMVAHGLKLLGFQFGNAEGCLEFILAALSWLELLRSAIGIEDDPDLGGEEENCEERFLGCVKKNGSGHFTPLCCRNFRRSIGGVPIVDARSKINKGIELFR
VVNGGPSGPTGSSIRALRFHGEYWCNSVVVFIGGLLHQKLRSRCCIFFTPLGNLAKRFKNSTKCGILNVSAALGLLSLQRQQLGHHQLIFPTMTLRLGT