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Lag0022445 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0022445
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionDNA-3-methyladenine glycosylase 1
Genome locationchr7:29219332..29220016
RNA-Seq ExpressionLag0022445
SyntenyLag0022445
Gene Ontology termsGO:0006285 - base-excision repair, AP site formation (biological process)
GO:0006307 - DNA dealkylation involved in DNA repair (biological process)
GO:0005634 - nucleus (cellular component)
GO:0016020 - membrane (cellular component)
GO:0032993 - protein-DNA complex (cellular component)
GO:0008725 - DNA-3-methyladenine glycosylase activity (molecular function)
GO:0032131 - alkylated DNA binding (molecular function)
GO:0043916 - DNA-7-methylguanine glycosylase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6608541.1 hypothetical protein SDJN03_01883, partial [Cucurbita argyrosperma subsp. sororia]1.4e-0978.43Show/hide
Query:  KSRQMKP---DPNSSQIVTISDGPKPIAAGKSNKSKTTQQRAAFASAPVLP
        K R++ P   DPNSSQIVTISDGPKPI  GKS+KSKT QQRAAFASAPVLP
Subjt:  KSRQMKP---DPNSSQIVTISDGPKPIAAGKSNKSKTTQQRAAFASAPVLP
KAG7037864.1 mag1, partial [Cucurbita argyrosperma subsp. argyrosperma]1.4e-0978.43Show/hide
Query:  KSRQMKP---DPNSSQIVTISDGPKPIAAGKSNKSKTTQQRAAFASAPVLP
        K R++ P   DPNSSQIVTISDGPKPI  GKS+KSKT QQRAAFASAPVLP
Subjt:  KSRQMKP---DPNSSQIVTISDGPKPIAAGKSNKSKTTQQRAAFASAPVLP
XP_022940509.1 probable DNA-3-methyladenine glycosylase 2 [Cucurbita moschata]5.4e-0976.47Show/hide
Query:  KSRQMKP---DPNSSQIVTISDGPKPIAAGKSNKSKTTQQRAAFASAPVLP
        K R++ P   DPNSSQIVTI DGPKPI  GKS+KSKT QQRAAFASAPVLP
Subjt:  KSRQMKP---DPNSSQIVTISDGPKPIAAGKSNKSKTTQQRAAFASAPVLP
XP_022981728.1 uncharacterized protein LOC111480795 [Cucurbita maxima]5.4e-0976.47Show/hide
Query:  KSRQMKP---DPNSSQIVTISDGPKPIAAGKSNKSKTTQQRAAFASAPVLP
        K R++ P   DPNSSQIVTI DGPKPI  GKS+KSKT QQRAAFASAPVLP
Subjt:  KSRQMKP---DPNSSQIVTISDGPKPIAAGKSNKSKTTQQRAAFASAPVLP
XP_023525023.1 probable DNA-3-methyladenine glycosylase 2 [Cucurbita pepo subsp. pepo]5.4e-0976.47Show/hide
Query:  KSRQMKP---DPNSSQIVTISDGPKPIAAGKSNKSKTTQQRAAFASAPVLP
        K R++ P   DPNSSQIVTI DGPKPI  GKS+KSKT QQRAAFASAPVLP
Subjt:  KSRQMKP---DPNSSQIVTISDGPKPIAAGKSNKSKTTQQRAAFASAPVLP
TrEMBL top hitse value%identityAlignment
A0A6J1CKY0 uncharacterized protein LOC1110122471.9e-0766.67Show/hide
Query:  KSRQMKP---DPNSSQIVTISDGPKPIAAGKSNKSKTTQQRAAFASAPVLP
        K R++ P   D NSSQI  ++DGPKPI++GKSNK+KT QQRAAFASAP+LP
Subjt:  KSRQMKP---DPNSSQIVTISDGPKPIAAGKSNKSKTTQQRAAFASAPVLP
A0A6J1F7I4 probable DNA-3-methyladenine glycosylase 26.5e-0872Show/hide
Query:  KSRQMKP---DPNSSQIVTISDGPKPIAAGKSNKSKTTQQRAAFASAPVL
        K R++ P   DPNSSQ+V I DGPKPIA  KSNKSKT QQRAAFASAPV+
Subjt:  KSRQMKP---DPNSSQIVTISDGPKPIAAGKSNKSKTTQQRAAFASAPVL
A0A6J1FKF6 probable DNA-3-methyladenine glycosylase 22.6e-0976.47Show/hide
Query:  KSRQMKP---DPNSSQIVTISDGPKPIAAGKSNKSKTTQQRAAFASAPVLP
        K R++ P   DPNSSQIVTI DGPKPI  GKS+KSKT QQRAAFASAPVLP
Subjt:  KSRQMKP---DPNSSQIVTISDGPKPIAAGKSNKSKTTQQRAAFASAPVLP
A0A6J1IIA5 probable DNA-3-methyladenine glycosylase 26.5e-0872Show/hide
Query:  KSRQMKP---DPNSSQIVTISDGPKPIAAGKSNKSKTTQQRAAFASAPVL
        K R++ P   DPNSSQ+V I DGPKPIA  KSNKSKT QQRAAFASAPV+
Subjt:  KSRQMKP---DPNSSQIVTISDGPKPIAAGKSNKSKTTQQRAAFASAPVL
A0A6J1J2W7 uncharacterized protein LOC1114807952.6e-0976.47Show/hide
Query:  KSRQMKP---DPNSSQIVTISDGPKPIAAGKSNKSKTTQQRAAFASAPVLP
        K R++ P   DPNSSQIVTI DGPKPI  GKS+KSKT QQRAAFASAPVLP
Subjt:  KSRQMKP---DPNSSQIVTISDGPKPIAAGKSNKSKTTQQRAAFASAPVLP
SwissProt top hitse value%identityAlignment
Q9SX98 Lysine histidine transporter-like 89.3e-0480.77Show/hide
Query:  LTQTTMVWVLSVSQQRPLTISYEPLS
        +T +TMVWVLSVSQ RP TISYEPLS
Subjt:  LTQTTMVWVLSVSQQRPLTISYEPLS
Arabidopsis top hitse value%identityAlignment
AT1G47670.1 Transmembrane amino acid transporter family protein6.6e-0580.77Show/hide
Query:  LTQTTMVWVLSVSQQRPLTISYEPLS
        +T +TMVWVLSVSQ RP TISYEPLS
Subjt:  LTQTTMVWVLSVSQQRPLTISYEPLS

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAAGACGACGACGACGAAAACCAGAGAGTGACAGCGACGGCGAAACAAAAACTGGCAAAGAACTGGCAAACGAAACCAGATCGGTGACGGCGAAAAGCAGGCAAAT
GAAACCAGATCCAAATTCCTCTCAGATTGTCACCATTTCGGATGGGCCGAAACCTATCGCCGCCGGAAAATCTAACAAGAGCAAGACGACCCAACAACGCGCCGCCTTCG
CGTCTGCCCCGGTACTGCCTGAACCCCTTACGCAAACCACCATGGTCTGGGTCCTCTCTGTTAGCCAGCAAAGGCCTCTAACGATCTCGTACGAACCCCTTTCGACTACG
AGAAAGGTCAAGAGAAGAACTTTTCGTTGTGGTGGGACTGAATGGCCAGAAGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGTCAAGACGACGACGACGAAAACCAGAGAGTGACAGCGACGGCGAAACAAAAACTGGCAAAGAACTGGCAAACGAAACCAGATCGGTGACGGCGAAAAGCAGGCAAAT
GAAACCAGATCCAAATTCCTCTCAGATTGTCACCATTTCGGATGGGCCGAAACCTATCGCCGCCGGAAAATCTAACAAGAGCAAGACGACCCAACAACGCGCCGCCTTCG
CGTCTGCCCCGGTACTGCCTGAACCCCTTACGCAAACCACCATGGTCTGGGTCCTCTCTGTTAGCCAGCAAAGGCCTCTAACGATCTCGTACGAACCCCTTTCGACTACG
AGAAAGGTCAAGAGAAGAACTTTTCGTTGTGGTGGGACTGAATGGCCAGAAGAATGA
Protein sequenceShow/hide protein sequence
MSRRRRRKPESDSDGETKTGKELANETRSVTAKSRQMKPDPNSSQIVTISDGPKPIAAGKSNKSKTTQQRAAFASAPVLPEPLTQTTMVWVLSVSQQRPLTISYEPLSTT
RKVKRRTFRCGGTEWPEE