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Lag0022456 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0022456
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr7:29609693..29611381
RNA-Seq ExpressionLag0022456
SyntenyLag0022456
Gene Ontology termsNA
InterPro domainsIPR025558 - Domain of unknown function DUF4283


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022149484.1 uncharacterized protein LOC111017902 [Momordica charantia]5.7e-1745.71Show/hide
Query:  MDVLVVLWERMVLTKEETMVVAVEEGLSLLLEATVQVCAVGKLFSSRKTNVEAFQKVLISVWNVHSSTRIGALGDNFFVIRFCSLSEKRRIMNGGPWSFD
        MD +  LWE    T +E   V ++ G  +L    V++C V KL +S++ + EA + V+ SVW VH+STR   LG N +VI F SLSEK R+++ GPW+F+
Subjt:  MDVLVVLWERMVLTKEETMVVAVEEGLSLLLEATVQVCAVGKLFSSRKTNVEAFQKVLISVWNVHSSTRIGALGDNFFVIRFCSLSEKRRIMNGGPWSFD

Query:  KSLLV
        KSLLV
Subjt:  KSLLV

XP_022155933.1 uncharacterized protein LOC111022932 [Momordica charantia]2.2e-1645.71Show/hide
Query:  MDVLVVLWERMVLTKEETMVVAVEEGLSLLLEATVQVCAVGKLFSSRKTNVEAFQKVLISVWNVHSSTRIGALGDNFFVIRFCSLSEKRRIMNGGPWSFD
        MD +  LWE   LTKE+   + ++    L+    VQ  AVGKL +S++ +VEAF+ V+ S+W VH ST I   G N +VI F S++EK R++  GPWSF+
Subjt:  MDVLVVLWERMVLTKEETMVVAVEEGLSLLLEATVQVCAVGKLFSSRKTNVEAFQKVLISVWNVHSSTRIGALGDNFFVIRFCSLSEKRRIMNGGPWSFD

Query:  KSLLV
         SLLV
Subjt:  KSLLV

XP_022156711.1 uncharacterized protein LOC111023555 [Momordica charantia]7.4e-1744.76Show/hide
Query:  MDVLVVLWERMVLTKEETMVVAVEEGLSLLLEATVQVCAVGKLFSSRKTNVEAFQKVLISVWNVHSSTRIGALGDNFFVIRFCSLSEKRRIMNGGPWSFD
        MD +  LWE   L KEE   + ++    +L    +Q+CAVGKL  S++  VEAF  V+  VW +H+STRI   G N +VI F +++EK R+ + GPW+FD
Subjt:  MDVLVVLWERMVLTKEETMVVAVEEGLSLLLEATVQVCAVGKLFSSRKTNVEAFQKVLISVWNVHSSTRIGALGDNFFVIRFCSLSEKRRIMNGGPWSFD

Query:  KSLLV
        KSLL+
Subjt:  KSLLV

XP_022158119.1 uncharacterized protein LOC111024676, partial [Momordica charantia]8.2e-1642.86Show/hide
Query:  MDVLVVLWERMVLTKEETMVVAVEEGLSLLLEATVQVCAVGKLFSSRKTNVEAFQKVLISVWNVHSSTRIGALGDNFFVIRFCSLSEKRRIMNGGPWSFD
        MD +  LWE   LT EE     V+    +L    +Q+C VGKL +S++ + +A   V+  VW +H STRI A G N +VI F ++ EK+R+++ GPW+FD
Subjt:  MDVLVVLWERMVLTKEETMVVAVEEGLSLLLEATVQVCAVGKLFSSRKTNVEAFQKVLISVWNVHSSTRIGALGDNFFVIRFCSLSEKRRIMNGGPWSFD

Query:  KSLLV
        KSL V
Subjt:  KSLLV

XP_028075299.1 uncharacterized protein LOC114277599 [Camellia sinensis]5.0e-1344.44Show/hide
Query:  DVLVVLWERMVLTKEETMVVAVEEGLSLLLEATVQVCAVGKLFSSRKTNVEAFQKVLISVWNVHSSTRIGALGDNFFVIRFCSLSEKRRIMNGGPWSFDK
        D L  L  R+VLTKEE   V VEE      EA V +C VGKL ++R  N EA +  L +VW          LGDN F+I+F  + +KRR+M  GPW+FDK
Subjt:  DVLVVLWERMVLTKEETMVVAVEEGLSLLLEATVQVCAVGKLFSSRKTNVEAFQKVLISVWNVHSSTRIGALGDNFFVIRFCSLSEKRRIMNGGPWSFDK

Query:  SLLVHNAF
         L++   F
Subjt:  SLLVHNAF

TrEMBL top hitse value%identityAlignment
A0A1R3K847 Uncharacterized protein2.3e-1134.96Show/hide
Query:  LVVLWERMVLTKEETMVVAVEEGLSLLLEATVQVCAVGKLFSSRKTNVEAFQKVLISVWNVHSSTRIGALGDNFFVIRFCSLSEKRRIMNGGPWSFDKSL
        L  LWE   LTKEETM +AV   +     A  ++C +GKL S R  N++  + VL  VW +    ++  +G+  ++ +F S  EK R+   GPW+F+K+L
Subjt:  LVVLWERMVLTKEETMVVAVEEGLSLLLEATVQVCAVGKLFSSRKTNVEAFQKVLISVWNVHSSTRIGALGDNFFVIRFCSLSEKRRIMNGGPWSFDKSL

Query:  LV---HNAF---------WVSLW
        LV   ++AF         W + W
Subjt:  LV---HNAF---------WVSLW

A0A6J1D765 uncharacterized protein LOC1110179022.7e-1745.71Show/hide
Query:  MDVLVVLWERMVLTKEETMVVAVEEGLSLLLEATVQVCAVGKLFSSRKTNVEAFQKVLISVWNVHSSTRIGALGDNFFVIRFCSLSEKRRIMNGGPWSFD
        MD +  LWE    T +E   V ++ G  +L    V++C V KL +S++ + EA + V+ SVW VH+STR   LG N +VI F SLSEK R+++ GPW+F+
Subjt:  MDVLVVLWERMVLTKEETMVVAVEEGLSLLLEATVQVCAVGKLFSSRKTNVEAFQKVLISVWNVHSSTRIGALGDNFFVIRFCSLSEKRRIMNGGPWSFD

Query:  KSLLV
        KSLLV
Subjt:  KSLLV

A0A6J1DP89 uncharacterized protein LOC1110229321.0e-1645.71Show/hide
Query:  MDVLVVLWERMVLTKEETMVVAVEEGLSLLLEATVQVCAVGKLFSSRKTNVEAFQKVLISVWNVHSSTRIGALGDNFFVIRFCSLSEKRRIMNGGPWSFD
        MD +  LWE   LTKE+   + ++    L+    VQ  AVGKL +S++ +VEAF+ V+ S+W VH ST I   G N +VI F S++EK R++  GPWSF+
Subjt:  MDVLVVLWERMVLTKEETMVVAVEEGLSLLLEATVQVCAVGKLFSSRKTNVEAFQKVLISVWNVHSSTRIGALGDNFFVIRFCSLSEKRRIMNGGPWSFD

Query:  KSLLV
         SLLV
Subjt:  KSLLV

A0A6J1DVS4 uncharacterized protein LOC1110235553.6e-1744.76Show/hide
Query:  MDVLVVLWERMVLTKEETMVVAVEEGLSLLLEATVQVCAVGKLFSSRKTNVEAFQKVLISVWNVHSSTRIGALGDNFFVIRFCSLSEKRRIMNGGPWSFD
        MD +  LWE   L KEE   + ++    +L    +Q+CAVGKL  S++  VEAF  V+  VW +H+STRI   G N +VI F +++EK R+ + GPW+FD
Subjt:  MDVLVVLWERMVLTKEETMVVAVEEGLSLLLEATVQVCAVGKLFSSRKTNVEAFQKVLISVWNVHSSTRIGALGDNFFVIRFCSLSEKRRIMNGGPWSFD

Query:  KSLLV
        KSLL+
Subjt:  KSLLV

A0A6J1DYG3 uncharacterized protein LOC1110246764.0e-1642.86Show/hide
Query:  MDVLVVLWERMVLTKEETMVVAVEEGLSLLLEATVQVCAVGKLFSSRKTNVEAFQKVLISVWNVHSSTRIGALGDNFFVIRFCSLSEKRRIMNGGPWSFD
        MD +  LWE   LT EE     V+    +L    +Q+C VGKL +S++ + +A   V+  VW +H STRI A G N +VI F ++ EK+R+++ GPW+FD
Subjt:  MDVLVVLWERMVLTKEETMVVAVEEGLSLLLEATVQVCAVGKLFSSRKTNVEAFQKVLISVWNVHSSTRIGALGDNFFVIRFCSLSEKRRIMNGGPWSFD

Query:  KSLLV
        KSL V
Subjt:  KSLLV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGAGATTTCGACGAAATTTCGTCGAAATGGGGGGAAGATCGAAACTTCCCCCCTTGGAAATGTCGATATGGTCGACATACCGACATTTCGGTGGAAATGTCGGTTT
TCTCTCCAAAGTGGGAGGTTGTCGTCGGTTTCTTCGACGAGTGGTTACTAAAGGTAGTCTGACGGTTTTCATGGACGTTTTGGTTGTGCTCTGGGAGCGTATGGTGTTGA
CTAAGGAAGAAACGATGGTTGTTGCCGTGGAGGAGGGTTTGTCGTTGCTGTTGGAGGCCACAGTTCAGGTATGTGCTGTTGGTAAGTTGTTTTCTTCTCGGAAAACGAAT
GTTGAGGCTTTTCAGAAAGTGCTCATTTCAGTTTGGAATGTCCATAGTTCTACCCGAATTGGGGCGCTGGGTGATAATTTCTTTGTTATTCGGTTTTGTTCTCTGTCTGA
GAAGCGACGAATTATGAATGGGGGCCCTTGGTCTTTTGATAAATCATTGTTGGTTCATAACGCATTTTGGGTCTCCTTGTGGAACTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCGAGATTTCGACGAAATTTCGTCGAAATGGGGGGAAGATCGAAACTTCCCCCCTTGGAAATGTCGATATGGTCGACATACCGACATTTCGGTGGAAATGTCGGTTT
TCTCTCCAAAGTGGGAGGTTGTCGTCGGTTTCTTCGACGAGTGGTTACTAAAGGTAGTCTGACGGTTTTCATGGACGTTTTGGTTGTGCTCTGGGAGCGTATGGTGTTGA
CTAAGGAAGAAACGATGGTTGTTGCCGTGGAGGAGGGTTTGTCGTTGCTGTTGGAGGCCACAGTTCAGGTATGTGCTGTTGGTAAGTTGTTTTCTTCTCGGAAAACGAAT
GTTGAGGCTTTTCAGAAAGTGCTCATTTCAGTTTGGAATGTCCATAGTTCTACCCGAATTGGGGCGCTGGGTGATAATTTCTTTGTTATTCGGTTTTGTTCTCTGTCTGA
GAAGCGACGAATTATGAATGGGGGCCCTTGGTCTTTTGATAAATCATTGTTGGTTCATAACGCATTTTGGGTCTCCTTGTGGAACTGA
Protein sequenceShow/hide protein sequence
MSRFRRNFVEMGGRSKLPPLEMSIWSTYRHFGGNVGFLSKVGGCRRFLRRVVTKGSLTVFMDVLVVLWERMVLTKEETMVVAVEEGLSLLLEATVQVCAVGKLFSSRKTN
VEAFQKVLISVWNVHSSTRIGALGDNFFVIRFCSLSEKRRIMNGGPWSFDKSLLVHNAFWVSLWN