; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0022457 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0022457
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr7:29611464..29612186
RNA-Seq ExpressionLag0022457
SyntenyLag0022457
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001878 - Zinc finger, CCHC-type
IPR025836 - Zinc knuckle CX2CX4HX4C
IPR040256 - Uncharacterized protein At4g02000-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TXG54013.1 hypothetical protein EZV62_019269 [Acer yangbiense]8.6e-1639.83Show/hide
Query:  LASLMGMVEEVHGEGHEEWLGSVMRVRVLIDLSKPLRRGVRLKISEN-KYQWCPVRYERLLDFCYQCGRIGHLHSDCELVLSELVAASPLQYGEWMRAIS
        L  L+G V+E+      E +G  +R+RVLID+  PL+RG+R+ + ++ K     + YERL +FCY CG+IGHL  DC L   E+ ++S  ++G WMRA+S
Subjt:  LASLMGMVEEVHGEGHEEWLGSVMRVRVLIDLSKPLRRGVRLKISEN-KYQWCPVRYERLLDFCYQCGRIGHLHSDCELVLSELVAASPLQYGEWMRAIS

Query:  MRQISGLYGTSDGLSGSR
          +  G     +   GSR
Subjt:  MRQISGLYGTSDGLSGSR

XP_015382889.1 uncharacterized protein LOC102626150 [Citrus sinensis]1.1e-1340.74Show/hide
Query:  MARRLASLMGMVEEVHGEGHEEWLGSVMRVRVLIDLSKPLRRGVRLKISENKYQWCPVR--YERLLDFCYQCGRIGHLHSDCELVLSELVAASPLQYGEW
        MA +L +++G VEEV      E LG  +R+R+ +D+SKPL++ + L+  E   +  P+R  YERL DFC+ CGRIGH + +C   +S+  +   L YG W
Subjt:  MARRLASLMGMVEEVHGEGHEEWLGSVMRVRVLIDLSKPLRRGVRLKISENKYQWCPVR--YERLLDFCYQCGRIGHLHSDCELVLSELVAASPLQYGEW

Query:  MRAISMRQ
        +RAI++ +
Subjt:  MRAISMRQ

XP_022149484.1 uncharacterized protein LOC111017902 [Momordica charantia]2.7e-2543.84Show/hide
Query:  MARRLASLMGMVEEVHGEGHEEWLGSVMRVRVLIDLSKPLRRGVRLKISENKYQWCPVRYERLLDFCYQCGRIGHLHSDCELVLSELVAASPLQYGEWMR
        MA  L + +G VEE+ G+G + W G  +RVRV ID+SKPLRRG++LK S+ K  WCP+RYE+L DFCY+CG+IGH   +CE     +   SP QYG+W+R
Subjt:  MARRLASLMGMVEEVHGEGHEEWLGSVMRVRVLIDLSKPLRRGVRLKISENKYQWCPVRYERLLDFCYQCGRIGHLHSDCELVLSELVAASPLQYGEWMR

Query:  AISMRQI-----------SGLYGTSDGLSGSRGMRGRRGSGDGSWR
        A  +++             G +G    ++G RG RG     D +WR
Subjt:  AISMRQI-----------SGLYGTSDGLSGSRGMRGRRGSGDGSWR

XP_022156711.1 uncharacterized protein LOC111023555 [Momordica charantia]2.3e-1352Show/hide
Query:  MARRLASLMGMVEEVHGEGHEEWLGSVMRVRVLIDLSKPLRRGVRLKISENKYQWCPVRYERLLDFCYQCGRIGH
        MA+ L + +G VEEV G    +W+   + VRV I++ KPLRRG+++K S+ K  WCP+RYERL DFCY CG +GH
Subjt:  MARRLASLMGMVEEVHGEGHEEWLGSVMRVRVLIDLSKPLRRGVRLKISENKYQWCPVRYERLLDFCYQCGRIGH

XP_042952131.1 uncharacterized protein LOC122289219 [Carya illinoinensis]6.2e-1442.86Show/hide
Query:  MARRLASLMGMVEEVHGEGHEEWLGSVMRVRVLIDLSKPLRRGVRLKISENKYQWCPVRYERLLDFCYQCGRIGHLHSDCELV-LSELVAASPLQYGEWM
        + R + + +G VEEV  E  E   G  MR+RV +D+S+PL RGVR+K+ +    W    YERL +FCY CG++GH   DCE V   E+ A++ L +G W+
Subjt:  MARRLASLMGMVEEVHGEGHEEWLGSVMRVRVLIDLSKPLRRGVRLKISENKYQWCPVRYERLLDFCYQCGRIGHLHSDCELV-LSELVAASPLQYGEWM

Query:  RAISM
         A S+
Subjt:  RAISM

TrEMBL top hitse value%identityAlignment
A0A5C7H2W9 zf-CCHC_4 domain-containing protein5.6e-1337.5Show/hide
Query:  MARRLASLMGMVEEVHGEGHEEWLGSVMRVRVLIDLSKPLRRGVRLKISEN-KYQWCPVRYERLLDFCYQCGRIGHLHSDCELVLSELVA--ASPLQYGE
        MA+ +A  +G V E+  +  E W G  +RV+V ID+SKPL+R +RLK+  N +     ++YERLL+FCY CGRI H   +C+ V +  +A   +P +YG 
Subjt:  MARRLASLMGMVEEVHGEGHEEWLGSVMRVRVLIDLSKPLRRGVRLKISEN-KYQWCPVRYERLLDFCYQCGRIGHLHSDCELVLSELVA--ASPLQYGE

Query:  WMRAISMRQISGLYGTSDGLSGSRGMRGRRGSGDGSWRGRGSGSPPSSPSTL
        W++A    +   LY  ++   G      R  S +GS  G G GS    P +L
Subjt:  WMRAISMRQISGLYGTSDGLSGSRGMRGRRGSGDGSWRGRGSGSPPSSPSTL

A0A5C7H9Y2 CCHC-type domain-containing protein4.2e-1639.83Show/hide
Query:  LASLMGMVEEVHGEGHEEWLGSVMRVRVLIDLSKPLRRGVRLKISEN-KYQWCPVRYERLLDFCYQCGRIGHLHSDCELVLSELVAASPLQYGEWMRAIS
        L  L+G V+E+      E +G  +R+RVLID+  PL+RG+R+ + ++ K     + YERL +FCY CG+IGHL  DC L   E+ ++S  ++G WMRA+S
Subjt:  LASLMGMVEEVHGEGHEEWLGSVMRVRVLIDLSKPLRRGVRLKISEN-KYQWCPVRYERLLDFCYQCGRIGHLHSDCELVLSELVAASPLQYGEWMRAIS

Query:  MRQISGLYGTSDGLSGSR
          +  G     +   GSR
Subjt:  MRQISGLYGTSDGLSGSR

A0A5C7ILH5 CCHC-type domain-containing protein1.5e-1335.71Show/hide
Query:  LASLMGMVEEVHGEGHEEWLGSVMRVRVLIDLSKPLRRGVRLKISEN-KYQWCPVRYERLLDFCYQCGRIGHLHSDCELVLSELVAASPLQYGEWMRAIS
        L  L+G V+E++     E +G ++R+RV+ID++ PL+RG+R+ + E+ K     + YE LL+FCY CG+IGHL  DC L    +   S  ++G WMRA S
Subjt:  LASLMGMVEEVHGEGHEEWLGSVMRVRVLIDLSKPLRRGVRLKISEN-KYQWCPVRYERLLDFCYQCGRIGHLHSDCELVLSELVAASPLQYGEWMRAIS

Query:  MRQISGLYGTSDGLSGSRGMRGRRGSGDGSWRGRGSGSPP
        + +    +G  +  +GSR        G+   +    GS P
Subjt:  MRQISGLYGTSDGLSGSRGMRGRRGSGDGSWRGRGSGSPP

A0A5C7IV30 CCHC-type domain-containing protein1.9e-1338.28Show/hide
Query:  ARRLASLMGMVEEVHGEGHEEWLGSVMRVRVLIDLSKPLRRGVRLKISE-NKYQWCPVRYERLLDFCYQCGRIGHLHSDC--ELVLSELVAASPLQYGEW
        A+ LA  +G V E+  +  E W G  MRV+VLID+S+PL+R +RLK+S+ ++     ++YERL DFCY CGR+GH+  +C  E      +  SP +YG+W
Subjt:  ARRLASLMGMVEEVHGEGHEEWLGSVMRVRVLIDLSKPLRRGVRLKISE-NKYQWCPVRYERLLDFCYQCGRIGHLHSDC--ELVLSELVAASPLQYGEW

Query:  MRAISMRQISGLYGTSDGLSGSRGMRGR
        ++A  + +    +     +SGS   R +
Subjt:  MRAISMRQISGLYGTSDGLSGSRGMRGR

A0A6J1D765 uncharacterized protein LOC1110179021.3e-2543.84Show/hide
Query:  MARRLASLMGMVEEVHGEGHEEWLGSVMRVRVLIDLSKPLRRGVRLKISENKYQWCPVRYERLLDFCYQCGRIGHLHSDCELVLSELVAASPLQYGEWMR
        MA  L + +G VEE+ G+G + W G  +RVRV ID+SKPLRRG++LK S+ K  WCP+RYE+L DFCY+CG+IGH   +CE     +   SP QYG+W+R
Subjt:  MARRLASLMGMVEEVHGEGHEEWLGSVMRVRVLIDLSKPLRRGVRLKISENKYQWCPVRYERLLDFCYQCGRIGHLHSDCELVLSELVAASPLQYGEWMR

Query:  AISMRQI-----------SGLYGTSDGLSGSRGMRGRRGSGDGSWR
        A  +++             G +G    ++G RG RG     D +WR
Subjt:  AISMRQI-----------SGLYGTSDGLSGSRGMRGRRGSGDGSWR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCGTCGGCTGGCCTCTCTGATGGGTATGGTTGAAGAGGTTCATGGTGAGGGACATGAAGAATGGCTGGGTTCAGTTATGCGTGTTCGTGTTCTAATTGATTTGTC
AAAACCTCTCCGTCGTGGGGTGAGGTTGAAGATTAGTGAGAATAAGTACCAATGGTGCCCCGTTCGGTATGAAAGACTGCTTGATTTTTGTTACCAATGTGGTCGGATTG
GGCATTTGCATAGTGATTGTGAACTTGTTTTGTCTGAGTTGGTTGCTGCTTCTCCTTTGCAATATGGGGAATGGATGAGGGCTATATCAATGAGACAGATTTCTGGTCTA
TATGGAACTTCTGATGGTTTATCTGGAAGTAGAGGGATGCGAGGACGTCGTGGCTCTGGTGATGGATCTTGGCGAGGTAGGGGTAGTGGGTCGCCCCCTAGTTCTCCTTC
TACTTTAGATGATGATTCACCTCCTAAGCAACTGGATATCCCACATTCTGCACAAAGAGAGGAAAGTATACCACCGTTGCCTGAGGTGGGTAAATGTTTCAAGGGTAAAT
CGATTGTGGAACTGCAACAGATGGGTGTGTCTATTACGGATAGTATGGCGGGTGTGGTTTCTAACTTATCTTCGGTGTATGTTGCTGCTAGGAAGAACTGGACGCGGCTG
GCTCGTGGTGCACTTATGGATGTTACAAACTCTGTTTTGGATACAGGGGTCTTCTTTTGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTCGTCGGCTGGCCTCTCTGATGGGTATGGTTGAAGAGGTTCATGGTGAGGGACATGAAGAATGGCTGGGTTCAGTTATGCGTGTTCGTGTTCTAATTGATTTGTC
AAAACCTCTCCGTCGTGGGGTGAGGTTGAAGATTAGTGAGAATAAGTACCAATGGTGCCCCGTTCGGTATGAAAGACTGCTTGATTTTTGTTACCAATGTGGTCGGATTG
GGCATTTGCATAGTGATTGTGAACTTGTTTTGTCTGAGTTGGTTGCTGCTTCTCCTTTGCAATATGGGGAATGGATGAGGGCTATATCAATGAGACAGATTTCTGGTCTA
TATGGAACTTCTGATGGTTTATCTGGAAGTAGAGGGATGCGAGGACGTCGTGGCTCTGGTGATGGATCTTGGCGAGGTAGGGGTAGTGGGTCGCCCCCTAGTTCTCCTTC
TACTTTAGATGATGATTCACCTCCTAAGCAACTGGATATCCCACATTCTGCACAAAGAGAGGAAAGTATACCACCGTTGCCTGAGGTGGGTAAATGTTTCAAGGGTAAAT
CGATTGTGGAACTGCAACAGATGGGTGTGTCTATTACGGATAGTATGGCGGGTGTGGTTTCTAACTTATCTTCGGTGTATGTTGCTGCTAGGAAGAACTGGACGCGGCTG
GCTCGTGGTGCACTTATGGATGTTACAAACTCTGTTTTGGATACAGGGGTCTTCTTTTGGTAA
Protein sequenceShow/hide protein sequence
MARRLASLMGMVEEVHGEGHEEWLGSVMRVRVLIDLSKPLRRGVRLKISENKYQWCPVRYERLLDFCYQCGRIGHLHSDCELVLSELVAASPLQYGEWMRAISMRQISGL
YGTSDGLSGSRGMRGRRGSGDGSWRGRGSGSPPSSPSTLDDDSPPKQLDIPHSAQREESIPPLPEVGKCFKGKSIVELQQMGVSITDSMAGVVSNLSSVYVAARKNWTRL
ARGALMDVTNSVLDTGVFFW