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Lag0022472 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0022472
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionprotein TSS
Genome locationchr7:29990935..29997821
RNA-Seq ExpressionLag0022472
SyntenyLag0022472
Gene Ontology termsGO:0006996 - organelle organization (biological process)
GO:0005737 - cytoplasm (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8126023.1 hypothetical protein FH972_020779 [Carpinus fangiana]1.1e-1291.3Show/hide
Query:  VRVCIGKPTTIVASRKGFYPTGKH-LLNHSLVGLLQQISRAFDAPY
        VRVC GKPTTIVASRKGFYPTGKH LL+HSLVGLLQQISRAFDA Y
Subjt:  VRVCIGKPTTIVASRKGFYPTGKH-LLNHSLVGLLQQISRAFDAPY

XP_022134804.1 LOW QUALITY PROTEIN: protein TSS [Momordica charantia]6.4e-1391.11Show/hide
Query:  VRVCIGKPTTIVASRKGFYPTGKHLLNHSLVGLLQQISRAFDAPY
        VRVC GKPTTIVASRKGFYP GKHLLNHSLV LLQQISRAFDA Y
Subjt:  VRVCIGKPTTIVASRKGFYPTGKHLLNHSLVGLLQQISRAFDAPY

XP_022925373.1 protein TSS [Cucurbita moschata]1.4e-1291.3Show/hide
Query:  VRVCIGKPTTIVASRKGFYPTGKH-LLNHSLVGLLQQISRAFDAPY
        VRVC GKPTTIVASRKGFYP GKH LLNHSLVGLLQQISRAFDA Y
Subjt:  VRVCIGKPTTIVASRKGFYPTGKH-LLNHSLVGLLQQISRAFDAPY

XP_023001818.1 protein TSS [Cucurbita maxima]1.4e-1291.3Show/hide
Query:  VRVCIGKPTTIVASRKGFYPTGKH-LLNHSLVGLLQQISRAFDAPY
        VRVC GKPTTIVASRKGFYP GKH LLNHSLVGLLQQISRAFDA Y
Subjt:  VRVCIGKPTTIVASRKGFYPTGKH-LLNHSLVGLLQQISRAFDAPY

XP_038879104.1 protein TSS [Benincasa hispida]1.4e-1291.3Show/hide
Query:  VRVCIGKPTTIVASRKGFYPTGKH-LLNHSLVGLLQQISRAFDAPY
        VRVC GKPTTIVASRKGFYP GKH LLNHSLVGLLQQISRAFDA Y
Subjt:  VRVCIGKPTTIVASRKGFYPTGKH-LLNHSLVGLLQQISRAFDAPY

TrEMBL top hitse value%identityAlignment
A0A5A7SVS4 Protein TSS6.9e-1391.3Show/hide
Query:  VRVCIGKPTTIVASRKGFYPTGKH-LLNHSLVGLLQQISRAFDAPY
        VRVC GKPTTIVASRKGFYP GKH LLNHSLVGLLQQISRAFDA Y
Subjt:  VRVCIGKPTTIVASRKGFYPTGKH-LLNHSLVGLLQQISRAFDAPY

A0A5D3BAC8 Protein TSS6.9e-1391.3Show/hide
Query:  VRVCIGKPTTIVASRKGFYPTGKH-LLNHSLVGLLQQISRAFDAPY
        VRVC GKPTTIVASRKGFYP GKH LLNHSLVGLLQQISRAFDA Y
Subjt:  VRVCIGKPTTIVASRKGFYPTGKH-LLNHSLVGLLQQISRAFDAPY

A0A5N6RXP5 Uncharacterized protein5.3e-1391.3Show/hide
Query:  VRVCIGKPTTIVASRKGFYPTGKH-LLNHSLVGLLQQISRAFDAPY
        VRVC GKPTTIVASRKGFYPTGKH LL+HSLVGLLQQISRAFDA Y
Subjt:  VRVCIGKPTTIVASRKGFYPTGKH-LLNHSLVGLLQQISRAFDAPY

A0A6J1BZT8 LOW QUALITY PROTEIN: protein TSS3.1e-1391.11Show/hide
Query:  VRVCIGKPTTIVASRKGFYPTGKHLLNHSLVGLLQQISRAFDAPY
        VRVC GKPTTIVASRKGFYP GKHLLNHSLV LLQQISRAFDA Y
Subjt:  VRVCIGKPTTIVASRKGFYPTGKHLLNHSLVGLLQQISRAFDAPY

A0A6J1KRN6 protein TSS6.9e-1391.3Show/hide
Query:  VRVCIGKPTTIVASRKGFYPTGKH-LLNHSLVGLLQQISRAFDAPY
        VRVC GKPTTIVASRKGFYP GKH LLNHSLVGLLQQISRAFDA Y
Subjt:  VRVCIGKPTTIVASRKGFYPTGKH-LLNHSLVGLLQQISRAFDAPY

SwissProt top hitse value%identityAlignment
F4JKH6 Protein TSS5.8e-0961.4Show/hide
Query:  VRVCIGKPTTIVASRKGFYPTGK-HLLNHSLVGLLQQISRAFDAPYYVDPQLELLIE
        ++V  GKP T+VASR GFYP GK  LL HSLV LLQQISR FDA Y  D  ++  IE
Subjt:  VRVCIGKPTTIVASRKGFYPTGK-HLLNHSLVGLLQQISRAFDAPYYVDPQLELLIE

Q9FHP1 ACT domain-containing protein ACR18.7e-0545.45Show/hide
Query:  VDPQLELLIERIYPPRVCIGNDTFQDCTLVKVRSLSSKFFKIDV
        +D ++E L+ERI PPRVC+ ND+  +CTL+KV S +     +D+
Subjt:  VDPQLELLIERIYPPRVCIGNDTFQDCTLVKVRSLSSKFFKIDV

Arabidopsis top hitse value%identityAlignment
AT1G01320.1 Tetratricopeptide repeat (TPR)-like superfamily protein8.1e-0654.35Show/hide
Query:  VRVCIGKPTTIVASRKGFYPTGK-HLLNHSLVGLLQQISRAFDAPY
        V++C GK   I   RKGFY  GK  ++ H+LV LL+QISRAFD  Y
Subjt:  VRVCIGKPTTIVASRKGFYPTGK-HLLNHSLVGLLQQISRAFDAPY

AT1G01320.2 Tetratricopeptide repeat (TPR)-like superfamily protein8.1e-0654.35Show/hide
Query:  VRVCIGKPTTIVASRKGFYPTGK-HLLNHSLVGLLQQISRAFDAPY
        V++C GK   I   RKGFY  GK  ++ H+LV LL+QISRAFD  Y
Subjt:  VRVCIGKPTTIVASRKGFYPTGK-HLLNHSLVGLLQQISRAFDAPY

AT4G28080.1 Tetratricopeptide repeat (TPR)-like superfamily protein4.1e-1061.4Show/hide
Query:  VRVCIGKPTTIVASRKGFYPTGK-HLLNHSLVGLLQQISRAFDAPYYVDPQLELLIE
        ++V  GKP T+VASR GFYP GK  LL HSLV LLQQISR FDA Y  D  ++  IE
Subjt:  VRVCIGKPTTIVASRKGFYPTGK-HLLNHSLVGLLQQISRAFDAPYYVDPQLELLIE

AT5G25320.1 ACT-like superfamily protein2.6e-0448.94Show/hide
Query:  YVDPQLELLIERIYPP--RVCIGNDTFQDCTLVKVRSLSSKFFKIDV
        Y DP  + L ERIY P  RV I ND+ QDCT+VKV S + +   ++V
Subjt:  YVDPQLELLIERIYPP--RVCIGNDTFQDCTLVKVRSLSSKFFKIDV

AT5G65890.1 ACT domain repeat 16.2e-0645.45Show/hide
Query:  VDPQLELLIERIYPPRVCIGNDTFQDCTLVKVRSLSSKFFKIDV
        +D ++E L+ERI PPRVC+ ND+  +CTL+KV S +     +D+
Subjt:  VDPQLELLIERIYPPRVCIGNDTFQDCTLVKVRSLSSKFFKIDV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGTTCCTGCATCCCAACCATTCTTTCTTCCATAGTCCTTGCCTCAGTCATCATGACAGTCACTACGTCAGAATCCGGTTCAAACAAAGGGTTATACTTAACAAGAAA
CTTGTCATTAGTATATGTCCCCTGCAATGTTGTTTCTTCACTTGCAATGATAGAACCTTTATCTTCTTGCAACCTCAGTTCATTGAAGCAACAATGGGCAGACTTGAACA
AAGGGATCTCACCCTCTCACTGGTCCGAGAGGGACTTTCTATTTAATGGTTGGACCATAAACATGTTGTTCATTAGAGGAGCGCTGGTTCGTGTTTGCATTGGAAAACCA
ACAACAATTGTTGCTTCGAGGAAAGGGTTTTACCCTACTGGGAAACATCTTCTTAATCATTCCTTGGTGGGTTTGTTGCAACAGATAAGCAGGGCATTTGATGCTCCTTA
TTACGTGGATCCCCAGTTGGAATTACTCATTGAAAGAATTTACCCACCCAGAGTTTGCATAGGCAATGATACCTTTCAGGATTGCACGCTTGTGAAGGTTCGGTCCTTAT
CTTCAAAGTTCTTCAAGATCGATGTACACGAGCAAGATTCTGTCGAAAAGAATGGATGCTGCATAGCAATCAATAAAGTTGAAGAATTCAGAGTCGTCAACGAAGGGCCC
TTTGTTTTGGGTATTTTAATTGCAATCGAGTCTGTAAGTCCATGTCGTTGTTTTGTATCAATTGAGGAAGAAATTCGGAGCAATTTGGTACAATTTGGGGCAAAATCGGA
GGAAAATCGAACTGGAAATCGAAGTATTTTTGGAAATCCGAGAGCCTGCGTCTTGACGTTGGTGGAAAACCCGATTCGCGCGGCCATAATAAAAGGTCACCGGTTCGAGC
CTTTGATGGCGCGTTTTGTGCTGTTAAAATTAAAAATTTTTCCAGTGTGCGCTTGTTTCAGTTCGTGGAGAGTCCGCGTGATTTCAGACCGGTTCAAGGAGAATAACCCA
GGTTCGGTCTGGTTCGTGGCTCGTGCTCACGGCTGGTTCAAGCGAGTTTTGAGCTGGTTTAGCATGATTCAGCGCGGTTCAGTCCATTTTCGTGCCGGTTCGAAGGGTTT
GGATGCGGTTCGAGGCTGTTTTGAGCTGGTTCACGGCATGATAAGACTTTATTAG
mRNA sequenceShow/hide mRNA sequence
ATGTGTTCCTGCATCCCAACCATTCTTTCTTCCATAGTCCTTGCCTCAGTCATCATGACAGTCACTACGTCAGAATCCGGTTCAAACAAAGGGTTATACTTAACAAGAAA
CTTGTCATTAGTATATGTCCCCTGCAATGTTGTTTCTTCACTTGCAATGATAGAACCTTTATCTTCTTGCAACCTCAGTTCATTGAAGCAACAATGGGCAGACTTGAACA
AAGGGATCTCACCCTCTCACTGGTCCGAGAGGGACTTTCTATTTAATGGTTGGACCATAAACATGTTGTTCATTAGAGGAGCGCTGGTTCGTGTTTGCATTGGAAAACCA
ACAACAATTGTTGCTTCGAGGAAAGGGTTTTACCCTACTGGGAAACATCTTCTTAATCATTCCTTGGTGGGTTTGTTGCAACAGATAAGCAGGGCATTTGATGCTCCTTA
TTACGTGGATCCCCAGTTGGAATTACTCATTGAAAGAATTTACCCACCCAGAGTTTGCATAGGCAATGATACCTTTCAGGATTGCACGCTTGTGAAGGTTCGGTCCTTAT
CTTCAAAGTTCTTCAAGATCGATGTACACGAGCAAGATTCTGTCGAAAAGAATGGATGCTGCATAGCAATCAATAAAGTTGAAGAATTCAGAGTCGTCAACGAAGGGCCC
TTTGTTTTGGGTATTTTAATTGCAATCGAGTCTGTAAGTCCATGTCGTTGTTTTGTATCAATTGAGGAAGAAATTCGGAGCAATTTGGTACAATTTGGGGCAAAATCGGA
GGAAAATCGAACTGGAAATCGAAGTATTTTTGGAAATCCGAGAGCCTGCGTCTTGACGTTGGTGGAAAACCCGATTCGCGCGGCCATAATAAAAGGTCACCGGTTCGAGC
CTTTGATGGCGCGTTTTGTGCTGTTAAAATTAAAAATTTTTCCAGTGTGCGCTTGTTTCAGTTCGTGGAGAGTCCGCGTGATTTCAGACCGGTTCAAGGAGAATAACCCA
GGTTCGGTCTGGTTCGTGGCTCGTGCTCACGGCTGGTTCAAGCGAGTTTTGAGCTGGTTTAGCATGATTCAGCGCGGTTCAGTCCATTTTCGTGCCGGTTCGAAGGGTTT
GGATGCGGTTCGAGGCTGTTTTGAGCTGGTTCACGGCATGATAAGACTTTATTAG
Protein sequenceShow/hide protein sequence
MCSCIPTILSSIVLASVIMTVTTSESGSNKGLYLTRNLSLVYVPCNVVSSLAMIEPLSSCNLSSLKQQWADLNKGISPSHWSERDFLFNGWTINMLFIRGALVRVCIGKP
TTIVASRKGFYPTGKHLLNHSLVGLLQQISRAFDAPYYVDPQLELLIERIYPPRVCIGNDTFQDCTLVKVRSLSSKFFKIDVHEQDSVEKNGCCIAINKVEEFRVVNEGP
FVLGILIAIESVSPCRCFVSIEEEIRSNLVQFGAKSEENRTGNRSIFGNPRACVLTLVENPIRAAIIKGHRFEPLMARFVLLKLKIFPVCACFSSWRVRVISDRFKENNP
GSVWFVARAHGWFKRVLSWFSMIQRGSVHFRAGSKGLDAVRGCFELVHGMIRLY