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Lag0022473 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0022473
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionTy3-gypsy retrotransposon protein
Genome locationchr7:30042258..30042893
RNA-Seq ExpressionLag0022473
SyntenyLag0022473
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_031735972.1 uncharacterized protein LOC116401693 [Cucumis sativus]1.7e-1550.44Show/hide
Query:  MAPKKAPAKVTTSSDSYTGPVTRSCSQGIEIREDHTPLAVASRISKLIEESSKDRVAVKDNPLFESVVPTSKQPKDTLNPDVMSVMMADVDQDERMEEME
        MA KKA +K + +SD+YTGP+TRS S+GI I+      A+A  I K + ES K  + +K+NPL+      S +     +PDVMSVMMADV  +  M EME
Subjt:  MAPKKAPAKVTTSSDSYTGPVTRSCSQGIEIREDHTPLAVASRISKLIEESSKDRVAVKDNPLFESVVPTSKQPKDTLNPDVMSVMMADVDQDERMEEME

Query:  RKLNLLMKAVDER
        RK+NLLMK VDER
Subjt:  RKLNLLMKAVDER

XP_031737053.1 uncharacterized protein LOC116402138 [Cucumis sativus]1.7e-1550.44Show/hide
Query:  MAPKKAPAKVTTSSDSYTGPVTRSCSQGIEIREDHTPLAVASRISKLIEESSKDRVAVKDNPLFESVVPTSKQPKDTLNPDVMSVMMADVDQDERMEEME
        MA KKA +K + +SD+YTGP+TRS S+GI I+      A+A  I K + ES K  + +K+NPL+      S +     +PDVMSVMMADV  +  M EME
Subjt:  MAPKKAPAKVTTSSDSYTGPVTRSCSQGIEIREDHTPLAVASRISKLIEESSKDRVAVKDNPLFESVVPTSKQPKDTLNPDVMSVMMADVDQDERMEEME

Query:  RKLNLLMKAVDER
        RK+NLLMK VDER
Subjt:  RKLNLLMKAVDER

XP_031739134.1 uncharacterized protein LOC116402863 [Cucumis sativus]1.7e-1550.44Show/hide
Query:  MAPKKAPAKVTTSSDSYTGPVTRSCSQGIEIREDHTPLAVASRISKLIEESSKDRVAVKDNPLFESVVPTSKQPKDTLNPDVMSVMMADVDQDERMEEME
        MA KKA +K + +SD+YTGP+TRS S+GI I+      A+A  I K + ES K  + +K+NPL+      S +     +PDVMSVMMADV  +  M EME
Subjt:  MAPKKAPAKVTTSSDSYTGPVTRSCSQGIEIREDHTPLAVASRISKLIEESSKDRVAVKDNPLFESVVPTSKQPKDTLNPDVMSVMMADVDQDERMEEME

Query:  RKLNLLMKAVDER
        RK+NLLMK VDER
Subjt:  RKLNLLMKAVDER

XP_031742032.1 uncharacterized protein LOC116404025 [Cucumis sativus]1.7e-1550.44Show/hide
Query:  MAPKKAPAKVTTSSDSYTGPVTRSCSQGIEIREDHTPLAVASRISKLIEESSKDRVAVKDNPLFESVVPTSKQPKDTLNPDVMSVMMADVDQDERMEEME
        MA KKA +K + +SD+YTGP+TRS S+GI I+      A+A  I K + ES K  + +K+NPL+      S +     +PDVMSVMMADV  +  M EME
Subjt:  MAPKKAPAKVTTSSDSYTGPVTRSCSQGIEIREDHTPLAVASRISKLIEESSKDRVAVKDNPLFESVVPTSKQPKDTLNPDVMSVMMADVDQDERMEEME

Query:  RKLNLLMKAVDER
        RK+NLLMK VDER
Subjt:  RKLNLLMKAVDER

XP_031742199.1 uncharacterized protein LOC105435721 [Cucumis sativus]1.7e-1550.44Show/hide
Query:  MAPKKAPAKVTTSSDSYTGPVTRSCSQGIEIREDHTPLAVASRISKLIEESSKDRVAVKDNPLFESVVPTSKQPKDTLNPDVMSVMMADVDQDERMEEME
        MA KKA +K + +SD+YTGP+TRS S+GI I+      A+A  I K + ES K  + +K+NPL+      S +     +PDVMSVMMADV  +  M EME
Subjt:  MAPKKAPAKVTTSSDSYTGPVTRSCSQGIEIREDHTPLAVASRISKLIEESSKDRVAVKDNPLFESVVPTSKQPKDTLNPDVMSVMMADVDQDERMEEME

Query:  RKLNLLMKAVDER
        RK+NLLMK VDER
Subjt:  RKLNLLMKAVDER

TrEMBL top hitse value%identityAlignment
A0A5A7TFN2 Ty3-gypsy retrotransposon protein2.0e-1447.79Show/hide
Query:  MAPKKAPAKVTTSSDSYTGPVTRSCSQGIEIREDHTPLAVASRISKLIEESSKDRVAVKDNPLFESVVPTSKQPKDTLNPDVMSVMMADVDQDERMEEME
        MA KKA +  + +SD+YTGP+TRS S+GI   +D     VA RI K + ES K  + +K+N L+++    S + K   +PDV SVMMAD+  +  M EME
Subjt:  MAPKKAPAKVTTSSDSYTGPVTRSCSQGIEIREDHTPLAVASRISKLIEESSKDRVAVKDNPLFESVVPTSKQPKDTLNPDVMSVMMADVDQDERMEEME

Query:  RKLNLLMKAVDER
        RK+N LMKAV+ER
Subjt:  RKLNLLMKAVDER

A0A5A7V1D2 Ty3-gypsy retrotransposon protein2.6e-1445.45Show/hide
Query:  KKAPAKVTTSSDSYTGPVTRSCSQGIEIREDHTPLAVASRISKLIEESSKDRVAVKDNPLFESVVPTSKQPKDTLNPDVMSVMMADVDQDERMEEMERKL
        KK  +K + +SD YTGP+TRSCS+GI   +D     VA  I K + ESSK  + +K+NPL+++   T  + K   +PD+MSVMM D+  +  M EMERK+
Subjt:  KKAPAKVTTSSDSYTGPVTRSCSQGIEIREDHTPLAVASRISKLIEESSKDRVAVKDNPLFESVVPTSKQPKDTLNPDVMSVMMADVDQDERMEEMERKL

Query:  NLLMKAVDER
        N LMK V+++
Subjt:  NLLMKAVDER

A0A5A7V265 Ty3-gypsy retrotransposon protein1.2e-1447.79Show/hide
Query:  MAPKKAPAKVTTSSDSYTGPVTRSCSQGIEIREDHTPLAVASRISKLIEESSKDRVAVKDNPLFESVVPTSKQPKDTLNPDVMSVMMADVDQDERMEEME
        MA KKA +K + ++D+YTGP+TR+ S+GI   +D     VA  I K + ES K  + +K+N L+E+    S + K   +PDVMSVMMAD+     MEEME
Subjt:  MAPKKAPAKVTTSSDSYTGPVTRSCSQGIEIREDHTPLAVASRISKLIEESSKDRVAVKDNPLFESVVPTSKQPKDTLNPDVMSVMMADVDQDERMEEME

Query:  RKLNLLMKAVDER
        RK+N+LMK V+ER
Subjt:  RKLNLLMKAVDER

A0A5A7VFQ8 Ty3-gypsy retrotransposon protein2.0e-1446.9Show/hide
Query:  MAPKKAPAKVTTSSDSYTGPVTRSCSQGIEIREDHTPLAVASRISKLIEESSKDRVAVKDNPLFESVVPTSKQPKDTLNPDVMSVMMADVDQDERMEEME
        MA KKA +K + +SD+Y GP+TRS S+GI   +D     VA  I K + ES K  + +K+NPL+++   TS + K    PDVMSVMMAD+  +  M +ME
Subjt:  MAPKKAPAKVTTSSDSYTGPVTRSCSQGIEIREDHTPLAVASRISKLIEESSKDRVAVKDNPLFESVVPTSKQPKDTLNPDVMSVMMADVDQDERMEEME

Query:  RKLNLLMKAVDER
        RK+N LMK ++ER
Subjt:  RKLNLLMKAVDER

A0A5D3BY54 Ty3-gypsy retrotransposon protein4.1e-1547.79Show/hide
Query:  MAPKKAPAKVTTSSDSYTGPVTRSCSQGIEIREDHTPLAVASRISKLIEESSKDRVAVKDNPLFESVVPTSKQPKDTLNPDVMSVMMADVDQDERMEEME
        MA KKA +  + +S++YTGP+TRS S+GI   +D     VA  I K + ES K  + +K+NPL+++   +S + K   +PDVMSVMMAD+  +  M EME
Subjt:  MAPKKAPAKVTTSSDSYTGPVTRSCSQGIEIREDHTPLAVASRISKLIEESSKDRVAVKDNPLFESVVPTSKQPKDTLNPDVMSVMMADVDQDERMEEME

Query:  RKLNLLMKAVDER
        RK+N LMKAV+ER
Subjt:  RKLNLLMKAVDER

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCACCAAAGAAAGCTCCCGCGAAGGTTACCACATCAAGCGACTCTTACACTGGTCCTGTCACTCGTAGTTGCTCCCAAGGAATTGAGATCAGGGAAGATCATACTCC
TCTTGCTGTTGCAAGCAGGATCTCAAAGTTGATTGAAGAATCCTCTAAGGATAGGGTTGCAGTCAAAGACAACCCACTGTTCGAATCTGTTGTTCCAACATCTAAGCAGC
CAAAGGATACACTAAATCCTGATGTGATGTCCGTCATGATGGCTGATGTAGACCAGGATGAAAGAATGGAAGAGATGGAAAGGAAACTCAATCTCTTAATGAAGGCAGTT
GATGAGAGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNC
TTCAGTCGCTCGTTCCTCCCTTCTTCAACCTTCGGCCGCCACAGCTATCGTTCATCTCTTCTTCAACCTTCGGCCACCGTATGTAACTTTACCTTTTATCAATTTTTCAG
CCCCTAATCCCTTCGTTCTCTCTCGTCAAGTCTCTTATCGTTCGCTCTCTGGTATCTCACTCGCTCGCGTCTCCCTCCTTCACTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCACCAAAGAAAGCTCCCGCGAAGGTTACCACATCAAGCGACTCTTACACTGGTCCTGTCACTCGTAGTTGCTCCCAAGGAATTGAGATCAGGGAAGATCATACTCC
TCTTGCTGTTGCAAGCAGGATCTCAAAGTTGATTGAAGAATCCTCTAAGGATAGGGTTGCAGTCAAAGACAACCCACTGTTCGAATCTGTTGTTCCAACATCTAAGCAGC
CAAAGGATACACTAAATCCTGATGTGATGTCCGTCATGATGGCTGATGTAGACCAGGATGAAAGAATGGAAGAGATGGAAAGGAAACTCAATCTCTTAATGAAGGCAGTT
GATGAGAGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNC
TTCAGTCGCTCGTTCCTCCCTTCTTCAACCTTCGGCCGCCACAGCTATCGTTCATCTCTTCTTCAACCTTCGGCCACCGTATGTAACTTTACCTTTTATCAATTTTTCAG
CCCCTAATCCCTTCGTTCTCTCTCGTCAAGTCTCTTATCGTTCGCTCTCTGGTATCTCACTCGCTCGCGTCTCCCTCCTTCACTGA
Protein sequenceShow/hide protein sequence
MAPKKAPAKVTTSSDSYTGPVTRSCSQGIEIREDHTPLAVASRISKLIEESSKDRVAVKDNPLFESVVPTSKQPKDTLNPDVMSVMMADVDQDERMEEMERKLNLLMKAV
DERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVARSSLLQPSAATAIVHLFFNLRPPYVTLPFINFSAPNPFVLSRQVSYRSLSGISLARVSLLH