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Lag0022488 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0022488
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr7:30416576..30416944
RNA-Seq ExpressionLag0022488
SyntenyLag0022488
Gene Ontology termsGO:0005488 - binding (molecular function)
InterPro domainsIPR025836 - Zinc knuckle CX2CX4HX4C


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022132681.1 uncharacterized protein LOC111005481 [Momordica charantia]2.5e-1944.95Show/hide
Query:  MAERLGNAIKQFQEYDIGSRGYGWKESLRVRVTFDITRPLCRNIKVRLDEPLGSVWTPIKYEKLPENCAYCGRIGHVTKDYNSYYSDGGSFSRRPQYGVW
        MA RLGNAI  F++ +  +  + W   LRVRV FD+ +PL R IK+ LD P+G  W PI+YE+LP+   +CGR+ H+ KD +    D  S S+  QYG W
Subjt:  MAERLGNAIKQFQEYDIGSRGYGWKESLRVRVTFDITRPLCRNIKVRLDEPLGSVWTPIKYEKLPENCAYCGRIGHVTKDYNSYYSDGGSFSRRPQYGVW

Query:  MAFNGRSSS
        + F G  +S
Subjt:  MAFNGRSSS

XP_022156185.1 uncharacterized protein LOC111023135 [Momordica charantia]2.9e-2047.17Show/hide
Query:  MAERLGNAIKQFQEYDIGSRGYGWKESLRVRVTFDITRPLCRNIKVRLDEPLGSVWTPIKYEKLPENCAYCGRIGHVTKDYNSYYSDGGSFSR-RPQYGV
        MA RLGNAI  F + D   +G+ W  SLR+RV  DIT+PL R IK+ +D P+G  W PI+YE+LP+ C +CG IGH + D ++ Y      SR   +YG 
Subjt:  MAERLGNAIKQFQEYDIGSRGYGWKESLRVRVTFDITRPLCRNIKVRLDEPLGSVWTPIKYEKLPENCAYCGRIGHVTKDYNSYYSDGGSFSR-RPQYGV

Query:  WMAFNG
        W+ F G
Subjt:  WMAFNG

XP_022158377.1 uncharacterized protein LOC111024874 [Momordica charantia]4.1e-1440.95Show/hide
Query:  MAERLGNAIKQFQEYDIGSRGYGWKESLRVRVTFDITRPLCRNIKVRLDEPLGSVWTPIKYEKLPENCAYCGRIGHVTKDYNSYYSDGGSFSRRPQYGVW
        MA RLGNA+  F+E D       W  +LRVRV  DI++PL R IK+ LD P+G  W PI+YE+LP+ C +CG                 S  ++ QYG W
Subjt:  MAERLGNAIKQFQEYDIGSRGYGWKESLRVRVTFDITRPLCRNIKVRLDEPLGSVWTPIKYEKLPENCAYCGRIGHVTKDYNSYYSDGGSFSRRPQYGVW

Query:  MAFNG
        + + G
Subjt:  MAFNG

XP_035546596.1 uncharacterized protein LOC118348645 [Juglans regia]4.2e-1133.33Show/hide
Query:  AERLGNAIKQFQEYDIGSRGYGWKESLRVRVTFDITRPLCRNIKVRLDEPLGSVWTPIKYEKLPENCAYCGRIGHVTKDYNSYYSDGGSFSRRP-QYGVW
        +E+LG +  +    D+  +G  W E LRV+V  D+++PL R   + + +     W P KYEKLP  C YCG + H     + ++SDG + ++ P QYG W
Subjt:  AERLGNAIKQFQEYDIGSRGYGWKESLRVRVTFDITRPLCRNIKVRLDEPLGSVWTPIKYEKLPENCAYCGRIGHVTKDYNSYYSDGGSFSRRP-QYGVW

Query:  M-AFNGRSSSIFRSPSTSLIGNT
        + A   ++ + +++ S S  G T
Subjt:  M-AFNGRSSSIFRSPSTSLIGNT

XP_042964753.1 uncharacterized protein LOC122298977 [Carya illinoinensis]2.5e-1139.8Show/hide
Query:  RLGNAIKQFQEYDIGSRGYGWKESLRVRVTFDITRPLCRNIKVRLDEPLGSVWTPIKYEKLPENCAYCGRIGHVTKDYNSYYSDGGSFSRRPQYGVWM
        RLG++I + QE D+     GW  SLRV++  D+ +PL R     L+     VW+P++YEKLP  C  CGRI H   D  S      +    PQYG W+
Subjt:  RLGNAIKQFQEYDIGSRGYGWKESLRVRVTFDITRPLCRNIKVRLDEPLGSVWTPIKYEKLPENCAYCGRIGHVTKDYNSYYSDGGSFSRRPQYGVWM

TrEMBL top hitse value%identityAlignment
A0A2N9FJU7 CCHC-type domain-containing protein2.7e-1137Show/hide
Query:  ERLGNAIKQFQEYDIGSRGYGWKESLRVRVTFDITRPLCRNIKVRLDEPLGSVWTPIKYEKLPENCAYCGRIGHVTKDYNSYYSDGGS-FSRRPQYGVWM
        ER+GNAI   +E D+   G GW   L VR+  DIT+P  R   +   + LG +W   KYE++P  C +CGR+GH+ +D  +   D  +      +YG W+
Subjt:  ERLGNAIKQFQEYDIGSRGYGWKESLRVRVTFDITRPLCRNIKVRLDEPLGSVWTPIKYEKLPENCAYCGRIGHVTKDYNSYYSDGGS-FSRRPQYGVWM

A0A6J1BSZ1 uncharacterized protein LOC1110054811.2e-1944.95Show/hide
Query:  MAERLGNAIKQFQEYDIGSRGYGWKESLRVRVTFDITRPLCRNIKVRLDEPLGSVWTPIKYEKLPENCAYCGRIGHVTKDYNSYYSDGGSFSRRPQYGVW
        MA RLGNAI  F++ +  +  + W   LRVRV FD+ +PL R IK+ LD P+G  W PI+YE+LP+   +CGR+ H+ KD +    D  S S+  QYG W
Subjt:  MAERLGNAIKQFQEYDIGSRGYGWKESLRVRVTFDITRPLCRNIKVRLDEPLGSVWTPIKYEKLPENCAYCGRIGHVTKDYNSYYSDGGSFSRRPQYGVW

Query:  MAFNGRSSS
        + F G  +S
Subjt:  MAFNGRSSS

A0A6J1DU55 uncharacterized protein LOC1110231351.4e-2047.17Show/hide
Query:  MAERLGNAIKQFQEYDIGSRGYGWKESLRVRVTFDITRPLCRNIKVRLDEPLGSVWTPIKYEKLPENCAYCGRIGHVTKDYNSYYSDGGSFSR-RPQYGV
        MA RLGNAI  F + D   +G+ W  SLR+RV  DIT+PL R IK+ +D P+G  W PI+YE+LP+ C +CG IGH + D ++ Y      SR   +YG 
Subjt:  MAERLGNAIKQFQEYDIGSRGYGWKESLRVRVTFDITRPLCRNIKVRLDEPLGSVWTPIKYEKLPENCAYCGRIGHVTKDYNSYYSDGGSFSR-RPQYGV

Query:  WMAFNG
        W+ F G
Subjt:  WMAFNG

A0A6J1DX30 uncharacterized protein LOC1110248742.0e-1440.95Show/hide
Query:  MAERLGNAIKQFQEYDIGSRGYGWKESLRVRVTFDITRPLCRNIKVRLDEPLGSVWTPIKYEKLPENCAYCGRIGHVTKDYNSYYSDGGSFSRRPQYGVW
        MA RLGNA+  F+E D       W  +LRVRV  DI++PL R IK+ LD P+G  W PI+YE+LP+ C +CG                 S  ++ QYG W
Subjt:  MAERLGNAIKQFQEYDIGSRGYGWKESLRVRVTFDITRPLCRNIKVRLDEPLGSVWTPIKYEKLPENCAYCGRIGHVTKDYNSYYSDGGSFSRRPQYGVW

Query:  MAFNG
        + + G
Subjt:  MAFNG

A0A6P9EGW2 uncharacterized protein LOC1183486452.1e-1133.33Show/hide
Query:  AERLGNAIKQFQEYDIGSRGYGWKESLRVRVTFDITRPLCRNIKVRLDEPLGSVWTPIKYEKLPENCAYCGRIGHVTKDYNSYYSDGGSFSRRP-QYGVW
        +E+LG +  +    D+  +G  W E LRV+V  D+++PL R   + + +     W P KYEKLP  C YCG + H     + ++SDG + ++ P QYG W
Subjt:  AERLGNAIKQFQEYDIGSRGYGWKESLRVRVTFDITRPLCRNIKVRLDEPLGSVWTPIKYEKLPENCAYCGRIGHVTKDYNSYYSDGGSFSRRP-QYGVW

Query:  M-AFNGRSSSIFRSPSTSLIGNT
        + A   ++ + +++ S S  G T
Subjt:  M-AFNGRSSSIFRSPSTSLIGNT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGAAAGACTGGGCAATGCAATCAAACAGTTCCAGGAATATGACATTGGAAGTCGAGGATACGGTTGGAAGGAAAGTCTTCGGGTTCGTGTTACCTTTGACATTAC
GCGTCCTCTGTGCCGCAACATTAAGGTCCGTCTTGACGAGCCTTTAGGAAGTGTTTGGACTCCGATTAAGTATGAAAAGCTCCCTGAAAATTGCGCTTATTGTGGACGTA
TTGGACATGTGACCAAGGATTACAATTCTTACTATAGTGACGGTGGTTCTTTTTCTAGACGACCACAGTATGGAGTGTGGATGGCTTTTAATGGTCGTTCTTCGAGCATT
TTTCGTTCGCCAAGTACCAGTCTGATAGGCAATACCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCGGAAAGACTGGGCAATGCAATCAAACAGTTCCAGGAATATGACATTGGAAGTCGAGGATACGGTTGGAAGGAAAGTCTTCGGGTTCGTGTTACCTTTGACATTAC
GCGTCCTCTGTGCCGCAACATTAAGGTCCGTCTTGACGAGCCTTTAGGAAGTGTTTGGACTCCGATTAAGTATGAAAAGCTCCCTGAAAATTGCGCTTATTGTGGACGTA
TTGGACATGTGACCAAGGATTACAATTCTTACTATAGTGACGGTGGTTCTTTTTCTAGACGACCACAGTATGGAGTGTGGATGGCTTTTAATGGTCGTTCTTCGAGCATT
TTTCGTTCGCCAAGTACCAGTCTGATAGGCAATACCTAG
Protein sequenceShow/hide protein sequence
MAERLGNAIKQFQEYDIGSRGYGWKESLRVRVTFDITRPLCRNIKVRLDEPLGSVWTPIKYEKLPENCAYCGRIGHVTKDYNSYYSDGGSFSRRPQYGVWMAFNGRSSSI
FRSPSTSLIGNT