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Lag0022495 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0022495
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionGag/pol protein
Genome locationchr7:30764479..30766473
RNA-Seq ExpressionLag0022495
SyntenyLag0022495
Gene Ontology termsGO:0003677 - DNA binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035676.1 gag/pol protein [Cucumis melo var. makuwa]5.6e-2669.77Show/hide
Query:  MSSSFVSLLKNEKLTDENYATWKSNLNTILVVDDLLFVLTEDCPPTPTRNASQVVKDAYDRWKKANDKTRVYILASLSEVLAKRHE
        M+SS V LL ++KL  +NYATWKSNLNTILVVDDL F+LTE+CP TPT NA++  ++AYDRW KAN+K RVYILAS+S+VLAK+HE
Subjt:  MSSSFVSLLKNEKLTDENYATWKSNLNTILVVDDLLFVLTEDCPPTPTRNASQVVKDAYDRWKKANDKTRVYILASLSEVLAKRHE

KAA0041460.1 gag/pol protein [Cucumis melo var. makuwa]2.1e-2570.93Show/hide
Query:  MSSSFVSLLKNEKLTDENYATWKSNLNTILVVDDLLFVLTEDCPPTPTRNASQVVKDAYDRWKKANDKTRVYILASLSEVLAKRHE
        M+SS V LL +EKL  +NYA WKSNLNTILVVDDL FVLTE+CP TPT NA++  + AYDRW KAN+K RVYILAS+S+VLAK+HE
Subjt:  MSSSFVSLLKNEKLTDENYATWKSNLNTILVVDDLLFVLTEDCPPTPTRNASQVVKDAYDRWKKANDKTRVYILASLSEVLAKRHE

KAA0063887.1 gag/pol protein [Cucumis melo var. makuwa]2.1e-2568.6Show/hide
Query:  MSSSFVSLLKNEKLTDENYATWKSNLNTILVVDDLLFVLTEDCPPTPTRNASQVVKDAYDRWKKANDKTRVYILASLSEVLAKRHE
        MSSS ++LLK ++LT ENYATWKS LN ILV+ DL FVL E+CPP PT+NASQ VKDAYD W KANDK  +Y+LASLS++L+K+HE
Subjt:  MSSSFVSLLKNEKLTDENYATWKSNLNTILVVDDLLFVLTEDCPPTPTRNASQVVKDAYDRWKKANDKTRVYILASLSEVLAKRHE

XP_022158568.1 uncharacterized protein LOC111025021 [Momordica charantia]1.6e-2567.44Show/hide
Query:  MSSSFVSLLKNEKLTDENYATWKSNLNTILVVDDLLFVLTEDCPPTPTRNASQVVKDAYDRWKKANDKTRVYILASLSEVLAKRHE
        MS+S + LL ++KL  +NY  WKSNLNTILV+DDL FVLTE+CPP P  NA++ V+DAYDRW KAN+K RVYILAS+SEVL+K+HE
Subjt:  MSSSFVSLLKNEKLTDENYATWKSNLNTILVVDDLLFVLTEDCPPTPTRNASQVVKDAYDRWKKANDKTRVYILASLSEVLAKRHE

XP_038882358.1 uncharacterized protein LOC120073622 [Benincasa hispida]1.2e-2567.44Show/hide
Query:  MSSSFVSLLKNEKLTDENYATWKSNLNTILVVDDLLFVLTEDCPPTPTRNASQVVKDAYDRWKKANDKTRVYILASLSEVLAKRHE
        M+SS + LL +EKL  +NY+ WKSNLNTILVVDDL FVLTE+CP  PT NA++ V++AYDRW KAN+K R+YILAS+S+VLAK+HE
Subjt:  MSSSFVSLLKNEKLTDENYATWKSNLNTILVVDDLLFVLTEDCPPTPTRNASQVVKDAYDRWKKANDKTRVYILASLSEVLAKRHE

TrEMBL top hitse value%identityAlignment
A0A5A7T0E9 Gag/pol protein2.7e-2669.77Show/hide
Query:  MSSSFVSLLKNEKLTDENYATWKSNLNTILVVDDLLFVLTEDCPPTPTRNASQVVKDAYDRWKKANDKTRVYILASLSEVLAKRHE
        M+SS V LL ++KL  +NYATWKSNLNTILVVDDL F+LTE+CP TPT NA++  ++AYDRW KAN+K RVYILAS+S+VLAK+HE
Subjt:  MSSSFVSLLKNEKLTDENYATWKSNLNTILVVDDLLFVLTEDCPPTPTRNASQVVKDAYDRWKKANDKTRVYILASLSEVLAKRHE

A0A5A7VA67 Gag/pol protein1.0e-2568.6Show/hide
Query:  MSSSFVSLLKNEKLTDENYATWKSNLNTILVVDDLLFVLTEDCPPTPTRNASQVVKDAYDRWKKANDKTRVYILASLSEVLAKRHE
        MSSS ++LLK ++LT ENYATWKS LN ILV+ DL FVL E+CPP PT+NASQ VKDAYD W KANDK  +Y+LASLS++L+K+HE
Subjt:  MSSSFVSLLKNEKLTDENYATWKSNLNTILVVDDLLFVLTEDCPPTPTRNASQVVKDAYDRWKKANDKTRVYILASLSEVLAKRHE

A0A5D3D0D9 Gag/pol protein1.0e-2568.6Show/hide
Query:  MSSSFVSLLKNEKLTDENYATWKSNLNTILVVDDLLFVLTEDCPPTPTRNASQVVKDAYDRWKKANDKTRVYILASLSEVLAKRHE
        MSSS ++LLK ++LT ENYATWKS LN ILV+ DL FVL E+CPP PT+NASQ VKDAYD W KANDK  +Y+LASLS++L+K+HE
Subjt:  MSSSFVSLLKNEKLTDENYATWKSNLNTILVVDDLLFVLTEDCPPTPTRNASQVVKDAYDRWKKANDKTRVYILASLSEVLAKRHE

A0A5D3DL59 Gag/pol protein1.0e-2570.93Show/hide
Query:  MSSSFVSLLKNEKLTDENYATWKSNLNTILVVDDLLFVLTEDCPPTPTRNASQVVKDAYDRWKKANDKTRVYILASLSEVLAKRHE
        M+SS V LL +EKL  +NYA WKSNLNTILVVDDL FVLTE+CP TPT NA++  + AYDRW KAN+K RVYILAS+S+VLAK+HE
Subjt:  MSSSFVSLLKNEKLTDENYATWKSNLNTILVVDDLLFVLTEDCPPTPTRNASQVVKDAYDRWKKANDKTRVYILASLSEVLAKRHE

A0A6J1DWG6 uncharacterized protein LOC1110250217.8e-2667.44Show/hide
Query:  MSSSFVSLLKNEKLTDENYATWKSNLNTILVVDDLLFVLTEDCPPTPTRNASQVVKDAYDRWKKANDKTRVYILASLSEVLAKRHE
        MS+S + LL ++KL  +NY  WKSNLNTILV+DDL FVLTE+CPP P  NA++ V+DAYDRW KAN+K RVYILAS+SEVL+K+HE
Subjt:  MSSSFVSLLKNEKLTDENYATWKSNLNTILVVDDLLFVLTEDCPPTPTRNASQVVKDAYDRWKKANDKTRVYILASLSEVLAKRHE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTTCCTCATTTGTCTCTCTGCTTAAAAATGAGAAATTAACCGACGAAAATTATGCTACGTGGAAGTCGAACCTGAATACGATTCTTGTTGTCGATGATCTGCTGTT
CGTCTTAACGGAGGATTGTCCTCCAACCCCTACTCGTAATGCATCCCAAGTAGTTAAGGATGCTTATGACCGCTGGAAAAAGGCCAATGATAAGACTCGCGTCTATATCT
TAGCCAGCTTATCTGAAGTTTTGGCTAAAAGGCATGAGGGCTTTTTTCACGCCGCCGCCGCCGCAGCTCCTCCGCCACTCTCAGCCGCCGCAAGCCGCGCCGCCGCTGCC
TCTCTCTCCGTCTGCACCTGTCTCTCTCGTCCGAGCGCCGCCGTCTTCAGCCGTGAGCCGCCGCCGTTGTTCGCAGATCGCCGCCGCCGCTGCCGTCTTCAGCCAAACAG
CCGCCTCGAGTCGTTTGAGATCCAAGCTGTCCTCTTCAATCTGAGCGATTCGAATAGTGGTTCCTCACGTTCCGGCAGCTCCAAGCATATTCAGGTTGTGGGCGAGTATT
TCGCATCACGTGGTTGGTGTTGTATCGAGTCGTTGGGGGATTTTCGATCAAGCGTAGTATCTCATTGTCGTTTACTTGGACATGCATTAAGTGTTGCTATGCTTGTAGGA
CTAAAAGCGTATATTCTTACTTCCAGGTGCAAGGAAAAATTTTGGGTTCCCTCTGCGTACGTCGTTATGCTGCCGAATTTTCGGTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCTTCCTCATTTGTCTCTCTGCTTAAAAATGAGAAATTAACCGACGAAAATTATGCTACGTGGAAGTCGAACCTGAATACGATTCTTGTTGTCGATGATCTGCTGTT
CGTCTTAACGGAGGATTGTCCTCCAACCCCTACTCGTAATGCATCCCAAGTAGTTAAGGATGCTTATGACCGCTGGAAAAAGGCCAATGATAAGACTCGCGTCTATATCT
TAGCCAGCTTATCTGAAGTTTTGGCTAAAAGGCATGAGGGCTTTTTTCACGCCGCCGCCGCCGCAGCTCCTCCGCCACTCTCAGCCGCCGCAAGCCGCGCCGCCGCTGCC
TCTCTCTCCGTCTGCACCTGTCTCTCTCGTCCGAGCGCCGCCGTCTTCAGCCGTGAGCCGCCGCCGTTGTTCGCAGATCGCCGCCGCCGCTGCCGTCTTCAGCCAAACAG
CCGCCTCGAGTCGTTTGAGATCCAAGCTGTCCTCTTCAATCTGAGCGATTCGAATAGTGGTTCCTCACGTTCCGGCAGCTCCAAGCATATTCAGGTTGTGGGCGAGTATT
TCGCATCACGTGGTTGGTGTTGTATCGAGTCGTTGGGGGATTTTCGATCAAGCGTAGTATCTCATTGTCGTTTACTTGGACATGCATTAAGTGTTGCTATGCTTGTAGGA
CTAAAAGCGTATATTCTTACTTCCAGGTGCAAGGAAAAATTTTGGGTTCCCTCTGCGTACGTCGTTATGCTGCCGAATTTTCGGTAG
Protein sequenceShow/hide protein sequence
MSSSFVSLLKNEKLTDENYATWKSNLNTILVVDDLLFVLTEDCPPTPTRNASQVVKDAYDRWKKANDKTRVYILASLSEVLAKRHEGFFHAAAAAAPPPLSAAASRAAAA
SLSVCTCLSRPSAAVFSREPPPLFADRRRRCRLQPNSRLESFEIQAVLFNLSDSNSGSSRSGSSKHIQVVGEYFASRGWCCIESLGDFRSSVVSHCRLLGHALSVAMLVG
LKAYILTSRCKEKFWVPSAYVVMLPNFR