| GenBank top hits | e value | %identity | Alignment |
|---|
| KAG7567979.1 Integrase catalytic core [Arabidopsis thaliana x Arabidopsis arenosa] | 5.0e-100 | 32.54 | Show/hide |
Query: YDGYISDMVERTLEVFMDDFSVFGETGRHSFYTKTLYYYLTR-TLAVSKLHIKIQDKKGTENQVADHLS--RLGEEAQVKKGLDIQELVADEQ-------
++ + S +V + V+ D ++ RH + K L R L + + ++I DKKG EN VADHLS R+ +E + + ++L+A Q
Subjt: YDGYISDMVERTLEVFMDDFSVFGETGRHSFYTKTLYYYLTR-TLAVSKLHIKIQDKKGTENQVADHLS--RLGEEAQVKKGLDIQELVADEQ-------
Query: ---ILEVRAV--ELPWFADYVNYLVSGLKPPEETAQKPKKFLKDVKDYNWDELYLYKLGPDQILRWCVTEEDVPLILEACHSAPYGGHFFGLKIASKVLQ
+++V A+ +LPW+ADYVNYLVSG +PP ++ + KKF KD+ + WDE YLY L D+I R C++E++ IL CH + YGGHF K SK+LQ
Subjt: ---ILEVRAV--ELPWFADYVNYLVSGLKPPEETAQKPKKFLKDVKDYNWDELYLYKLGPDQILRWCVTEEDVPLILEACHSAPYGGHFFGLKIASKVLQ
Query: SRYFRPSLFKYAHLFTKNCDQCQRTGNLTAKSEMLLNFILEVEIFGVWGIDFMCPFPPSFGNIYILLAVDYVSKWIEAIATTTIDAKVVMKIFMKNMFTR
+ ++ P++FK F CD CQR GN++ ++EM N ILEVEIF VWGIDFM PFP S+GN YIL+AVDYVS W+EAIA+ T D++VV+K+F +F R
Subjt: SRYFRPSLFKYAHLFTKNCDQCQRTGNLTAKSEMLLNFILEVEIFGVWGIDFMCPFPPSFGNIYILLAVDYVSKWIEAIATTTIDAKVVMKIFMKNMFTR
Query: CGTSRFIISDEGSHFLNKIIANLFSKYNIRHRVATAYHPKTNGQVELFNIEIKAILEKTVDPSKR--------------------IG-------------
G R +I+D G+HF+NK+ NL K+ ++H+VAT YHP+T+GQVE+ N EIKAILEKTV +++ IG
Subjt: CGTSRFIISDEGSHFLNKIIANLFSKYNIRHRVATAYHPKTNGQVELFNIEIKAILEKTVDPSKR--------------------IG-------------
Query: ----------------HYDL-------------------------------------------------------TRLELFLGKLKSRWSGPFEIVRIFD
++D+ +RL LF GKLKSRWSGPF + +
Subjt: ----------------HYDL-------------------------------------------------------TRLELFLGKLKSRWSGPFEIVRIFD
Query: YGTVKLMDNQG---IISRTLNQVL------DTKKINPKQACMEQEERDPRVFRRRLWTKKPLLKLPLPQQCRPSREPIAEKMLEGKCKEEGFQEGCTRKA
YG + L G + + L + + + I ++C EQ + + + + +QC+ S + + +R
Subjt: YGTVKLMDNQG---IISRTLNQVL------DTKKINPKQACMEQEERDPRVFRRRLWTKKPLLKLPLPQQCRPSREPIAEKMLEGKCKEEGFQEGCTRKA
Query: SDHRTPQDVFEEMIRQGSPIGEILALI-STR--DLLWELKARPRSGNQARRRGDRDGDVRCWRIRAFLSLSLNSWIARPQIEAENFEMKPVMFQMMQIVG
++ Q E S + STR L+ ++K G R DGD A + I P ++ NFE+K + M+Q
Subjt: SDHRTPQDVFEEMIRQGSPIGEILALI-STR--DLLWELKARPRSGNQARRRGDRDGDVRCWRIRAFLSLSLNSWIARPQIEAENFEMKPVMFQMMQIVG
Query: QFHGFSFEDHHLHLKSFLGVSDSFVIQGVSRDVLRLTLFPYSLRDGAKAWLNSFAPRSIRTWNKLAEKFLSKYFPPTRNAKLRSEIVGFRQLEDETFSEA
+FHG ED HL +F + I GVS D +L LFP+SL D A W + SI +W+ + FL+K+F +R A+LR++I F Q + E+ EA
Subjt: QFHGFSFEDHHLHLKSFLGVSDSFVIQGVSRDVLRLTLFPYSLRDGAKAWLNSFAPRSIRTWNKLAEKFLSKYFPPTRNAKLRSEIVGFRQLEDETFSEA
Query: WE
WE
Subjt: WE
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| KAG7568035.1 Integrase catalytic core [Arabidopsis thaliana x Arabidopsis arenosa] | 4.4e-96 | 31.42 | Show/hide |
Query: YDGYISDMVERTLEVFMDDFSVFGETGRHSFYTKTLYYYLTR-TLAVSKLHIKIQDKKGTENQVADHLS--RLGEEAQVKKGLDIQELVADEQ-------
++ + S +V + V+ D ++ RH + K L R L + + ++I DKKG EN VADHLS R+ +E + + ++L+A Q
Subjt: YDGYISDMVERTLEVFMDDFSVFGETGRHSFYTKTLYYYLTR-TLAVSKLHIKIQDKKGTENQVADHLS--RLGEEAQVKKGLDIQELVADEQ-------
Query: ---ILEVRAV--ELPWFADYVNYLVSGLKPPEETAQKPKKFLKDVKDYNWDELYLYKLGPDQILRWCVTEEDVPLILEACHSAPYGGHFFGLKIASKVLQ
+++V A+ +LPW+ADYVNYLVSG +PP ++ + KKF KD+ + WDE YLY L D+I R CV+E++ IL H + YGGHF K SK+LQ
Subjt: ---ILEVRAV--ELPWFADYVNYLVSGLKPPEETAQKPKKFLKDVKDYNWDELYLYKLGPDQILRWCVTEEDVPLILEACHSAPYGGHFFGLKIASKVLQ
Query: SRYFRPSLFKYAHLFTKNCDQCQRTGNLTAKSEMLLNFILEVEIFGVWGIDFMCPFPPSFGNIYILLAVDYVSKWIEAIATTTIDAKVVMKIFMKNMFTR
+ ++ P++F+ A F CD CQR GN++ ++EM N ILEVEIF VWGIDFM PFP S+GN YIL+AVDYVSKW+EAIA+ T D++VV+K+F +F R
Subjt: SRYFRPSLFKYAHLFTKNCDQCQRTGNLTAKSEMLLNFILEVEIFGVWGIDFMCPFPPSFGNIYILLAVDYVSKWIEAIATTTIDAKVVMKIFMKNMFTR
Query: CGTSRFIISDEGSHFLNKIIANLFSKYNIRHRVATAYHPKTNGQVELFNIEIKAILEKTVDPSKR--------------------IG-------------
G R +ISD G+HF+NK+ NL K+ ++H+VAT YHP+T+GQVE+ N EIKAILEKTV +++ IG
Subjt: CGTSRFIISDEGSHFLNKIIANLFSKYNIRHRVATAYHPKTNGQVELFNIEIKAILEKTVDPSKR--------------------IG-------------
Query: ----------------HYDL-------------------------------------------------------TRLELFLGKLKSRWSGPFEIVRIFD
++D+ +RL LF GKLKSRWSGPF + +
Subjt: ----------------HYDL-------------------------------------------------------TRLELFLGKLKSRWSGPFEIVRIFD
Query: YGTVKLMDNQG---IISRTLNQVLDTKKI-------NPKQACMEQEERDP---------------RVFRRRLWTKKPLLKLPLP---QQC----------
YG + L G + + L + + + I P+ A E E+ D R + T LP P Q C
Subjt: YGTVKLMDNQG---IISRTLNQVLDTKKI-------NPKQACMEQEERDP---------------RVFRRRLWTKKPLLKLPLP---QQC----------
Query: --------------RPSREPIAEKMLEGKCKEEGFQEGCTRKASDHRTPQDVFEEMI-RQGSPIGEILALISTRDLLWELKARPRSGNQARRRG------
+R P+AE+ Q+ TR S +P +F + + SP ++ L+ R + E S N RRG
Subjt: --------------RPSREPIAEKMLEGKCKEEGFQEGCTRKASDHRTPQDVFEEMI-RQGSPIGEILALISTRDLLWELKARPRSGNQARRRG------
Query: -----------DRDGDVRCW---RIRAFLSLSLNSWIAR--------------------------------------------PQIEAENFEMKPVMFQM
+ V C+ R R +L N I R P ++ NFE+K + M
Subjt: -----------DRDGDVRCW---RIRAFLSLSLNSWIAR--------------------------------------------PQIEAENFEMKPVMFQM
Query: MQIVGQFHGFSFEDHHLHLKSFLGVSDSFVIQGVSRDVLRLTLFPYSLRDGAKAWLNSFAPRSIRTWNKLAEKFLSKYFPPTRNAKLRSEIVGFRQLEDE
+Q +FHG ED HL F + I GVS D +L LFP+SL D A W + SI TW+ + FL+K+F +R A+LR+EI GF Q E
Subjt: MQIVGQFHGFSFEDHHLHLKSFLGVSDSFVIQGVSRDVLRLTLFPYSLRDGAKAWLNSFAPRSIRTWNKLAEKFLSKYFPPTRNAKLRSEIVGFRQLEDE
Query: TFSEAWE
TF EAW+
Subjt: TFSEAWE
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| KAG7578951.1 Ribonuclease H-like superfamily [Arabidopsis thaliana x Arabidopsis arenosa] | 2.6e-96 | 31.58 | Show/hide |
Query: YDGYISDMVERTLEVFMDDFSVFGETGRHSFYTKTLYYYLTR-TLAVSKLHIKIQDKKGTENQVADHLSRLGEEAQVKKGLDIQELVADEQILEVRAVEL
++ + S +V + V+ D ++ RH + K L R L + + ++I DKKG EN ADHLSR+ ++++ + I + + +EQ+L +++ E+
Subjt: YDGYISDMVERTLEVFMDDFSVFGETGRHSFYTKTLYYYLTR-TLAVSKLHIKIQDKKGTENQVADHLSRLGEEAQVKKGLDIQELVADEQILEVRAVEL
Query: ------------------PWFADYVNYLVSGLKPPEETAQKPKKFLKDVKDYNWDELYLYKLGPDQILRWCVTEEDVPLILEACHSAPYGGHFFGLKIAS
PW+AD VNYL+ G P A + KKF +D+ Y WDE YLYK G D + R C+ EE+V +LE CH + YGGHF K
Subjt: ------------------PWFADYVNYLVSGLKPPEETAQKPKKFLKDVKDYNWDELYLYKLGPDQILRWCVTEEDVPLILEACHSAPYGGHFFGLKIAS
Query: KVLQSRYFRPSLFKYAHLFTKNCDQCQRTGNLTAKSEMLLNFILEVEIFGVWGIDFMCPF-PPSFGNIYILLAVDYVSKWIEAIATTTIDAKVVMKIFMK
KVLQ+ + PS+FK A+ F CD CQR GN+T ++EM N ILEVE+F VWGIDFM PF P S+GN YIL+AVDYVSKW+EAIA+ T D KVV+K+F
Subjt: KVLQSRYFRPSLFKYAHLFTKNCDQCQRTGNLTAKSEMLLNFILEVEIFGVWGIDFMCPF-PPSFGNIYILLAVDYVSKWIEAIATTTIDAKVVMKIFMK
Query: NMFTRCGTSRFIISDEGSHFLNKIIANLFSKYNIRHRVATAYHPKTNGQVELFNIEIKAILEKTVDPSKR--------------------IGH-------
+F R G + +ISD GSHF+NK+ +L K+ ++H+VAT YHP+T+GQVE+ N +IKAIL + V SKR IG
Subjt: NMFTRCGTSRFIISDEGSHFLNKIIANLFSKYNIRHRVATAYHPKTNGQVELFNIEIKAILEKTVDPSKR--------------------IGH-------
Query: ---------------------------------YDL--------------------------------------------TRLELFLGKLKSRWSGPFEI
DL +RL+LF GKLKSRWSGPF I
Subjt: ---------------------------------YDL--------------------------------------------TRLELFLGKLKSRWSGPFEI
Query: VRIFDYGTVKLMDNQGIISRTLNQVLDTKKINPKQACMEQ----------------------------------------------EERDPRVFRRRLWT
+ +GTV L G R Q + K I ++C EQ E+ V + +
Subjt: VRIFDYGTVKLMDNQGIISRTLNQVLDTKKINPKQACMEQ----------------------------------------------EERDPRVFRRRLWT
Query: KKPLLKLPLP------QQCRPSREPIAEKMLEG-KCKEEGFQEGCTRKASD----------HRTPQDVFEEMIR-----QGSPIGEILALISTRDLLWEL
+ + P P + CR E +LE + E CTR + + + V+ R + + E L + L EL
Subjt: KKPLLKLPLP------QQCRPSREPIAEKMLEG-KCKEEGFQEGCTRKASD----------HRTPQDVFEEMIR-----QGSPIGEILALISTRDLLWEL
Query: K-ARPRSGNQAR-------RRGDRDGDVRCWRIRAF---LSLSLNSWIARPQIEAENFEMKPVMFQMMQIVGQFHGFSFEDHHLHLKSFLGVSDSFVIQG
K R R G + + D G I A + I P ++ NFE+K + M+Q +FHG ED HL +F + I G
Subjt: K-ARPRSGNQAR-------RRGDRDGDVRCWRIRAF---LSLSLNSWIARPQIEAENFEMKPVMFQMMQIVGQFHGFSFEDHHLHLKSFLGVSDSFVIQG
Query: VSRDVLRLTLFPYSLRDGAKAWLNSFAPRSIRTWNKLAEKFLSKYFPPTRNAKLRSEIVGFRQLEDETFSEAWE
VS D +L LFP+SL D A W + SI +W+ + FL+K+F +R A+LR+EI F Q + E+ EAWE
Subjt: VSRDVLRLTLFPYSLRDGAKAWLNSFAPRSIRTWNKLAEKFLSKYFPPTRNAKLRSEIVGFRQLEDETFSEAWE
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| PIN21854.1 DNA-directed DNA polymerase [Handroanthus impetiginosus] | 3.7e-95 | 47.38 | Show/hide |
Query: LAVSKLHIKIQDKKGTENQVADHLSRLGEEAQVKKGLDIQELVADEQILEVRAVELPWFADYVNYLVSGLKPPEETAQKPKKFLKDVKDYNWDELYLYKL
L + + ++I+D+KG ENQ+ADHLSRL A+ + I + DEQ+L + A ++PW+AD VNYL G+ P + +AQ+ KKFL D + Y WD+ +L+K
Subjt: LAVSKLHIKIQDKKGTENQVADHLSRLGEEAQVKKGLDIQELVADEQILEVRAVELPWFADYVNYLVSGLKPPEETAQKPKKFLKDVKDYNWDELYLYKL
Query: GPDQILRWCVTEEDVPLILEACHSAPYGGHFFGLKIASKVLQSRYFRPSLFKYAHLFTKNCDQCQRTGNLTAKSEMLLNFILEVEIFGVWGIDFMCPFPP
GPD ILR CV E ++ I E CH++PYGGHF + A+K+LQS +F P+LFK H F NCD+CQRTGN++ + EM L ILEVE+F VWGIDFM PF P
Subjt: GPDQILRWCVTEEDVPLILEACHSAPYGGHFFGLKIASKVLQSRYFRPSLFKYAHLFTKNCDQCQRTGNLTAKSEMLLNFILEVEIFGVWGIDFMCPFPP
Query: SFGNIYILLAVDYVSKWIEAIATTTIDAKVVMKIFMKNMFTRCGTSRFIISDEGSHFLNKIIANLFSKYNIRHRVATAYHPKTNGQVELFNIEIKAILEK
SFGN+YIL+AVDY+SKW+EA+A D+KVV+ KN+FTR GT R IISD G+HF N+ L SKY ++H+++T YHP+T+GQVE+ N EIK LEK
Subjt: SFGNIYILLAVDYVSKWIEAIATTTIDAKVVMKIFMKNMFTRCGTSRFIISDEGSHFLNKIIANLFSKYNIRHRVATAYHPKTNGQVELFNIEIKAILEK
Query: TV-----DPSKRI----------------------------------------GHYDL---TRLELFLGKLKSRWSGPFEIVRIFDYGTVKLMDNQGIIS
TV D SKR+ G Y L +RL+LF KLKSRWS PF I + +G V+L +NQ +
Subjt: TV-----DPSKRI----------------------------------------GHYDL---TRLELFLGKLKSRWSGPFEIVRIFDYGTVKLMDNQGIIS
Query: R
R
Subjt: R
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| XP_023874613.1 uncharacterized protein LOC111987139 [Quercus suber] | 2.2e-95 | 57.33 | Show/hide |
Query: LAVSKLHIKIQDKKGTENQVADHLSRLGEEAQVKKGLDIQELVADEQILEVRAVELPWFADYVNYLVSGLKPPEETAQKPKKFLKDVKDYNWDELYLYKL
L + + ++++DKKG+EN VADHLSRL E+ +V+ L IQE DEQ+ ++LPW+AD VN+L + PP+ T + KKFL DVK Y WDE L+K
Subjt: LAVSKLHIKIQDKKGTENQVADHLSRLGEEAQVKKGLDIQELVADEQILEVRAVELPWFADYVNYLVSGLKPPEETAQKPKKFLKDVKDYNWDELYLYKL
Query: GPDQILRWCVTEEDVPLILEACHSAPYGGHFFGLKIASKVLQSRYFRPSLFKYAHLFTKNCDQCQRTGNLTAKSEMLLNFILEVEIFGVWGIDFMCPFPP
PDQI+R CV EE++ IL CHS+ YGGHF + A+KVLQS +F PS+F+ ++ K CD+CQR GN++ + E+ L ILEVE+F VWGIDFM PFPP
Subjt: GPDQILRWCVTEEDVPLILEACHSAPYGGHFFGLKIASKVLQSRYFRPSLFKYAHLFTKNCDQCQRTGNLTAKSEMLLNFILEVEIFGVWGIDFMCPFPP
Query: SFGNIYILLAVDYVSKWIEAIATTTIDAKVVMKIFMKNMFTRCGTSRFIISDEGSHFLNKIIANLFSKYNIRHRVATAYHPKTNGQVELFNIEIKAILEK
SFG +YILLAVDYVSKW+EAIATTT DAKVV+K KN+FTR GT R IISDEG+HF NK+ NL SKY ++H++A AYHP+TNGQ E+ N EIK ILEK
Subjt: SFGNIYILLAVDYVSKWIEAIATTTIDAKVVMKIFMKNMFTRCGTSRFIISDEGSHFLNKIIANLFSKYNIRHRVATAYHPKTNGQVELFNIEIKAILEK
Query: TVDPSKR
TV+ +++
Subjt: TVDPSKR
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A2G9FWY3 Reverse transcriptase | 3.4e-94 | 55.37 | Show/hide |
Query: LAVSKLHIKIQDKKGTENQVADHLSRLGEEAQVKKGLDIQELVADEQILEVRAVELPWFADYVNYLVSGLKPPEETAQKPKKFLKDVKDYNWDELYLYKL
L + + ++I+D+KGTENQ+ADHLSRL A+ + I + DEQ+L + A ++PW+AD VNYL G+ P + +AQ+ KKFL D + Y WD+ +L+K
Subjt: LAVSKLHIKIQDKKGTENQVADHLSRLGEEAQVKKGLDIQELVADEQILEVRAVELPWFADYVNYLVSGLKPPEETAQKPKKFLKDVKDYNWDELYLYKL
Query: GPDQILRWCVTEEDVPLILEACHSAPYGGHFFGLKIASKVLQSRYFRPSLFKYAHLFTKNCDQCQRTGNLTAKSEMLLNFILEVEIFGVWGIDFMCPFPP
GPD ILR CV E ++ ILE CH++PYGGHF G + A+K+LQS +F P+LFK AH F NCD+CQRTGN++ + EM LN ILEVE+F VWGIDFM PF P
Subjt: GPDQILRWCVTEEDVPLILEACHSAPYGGHFFGLKIASKVLQSRYFRPSLFKYAHLFTKNCDQCQRTGNLTAKSEMLLNFILEVEIFGVWGIDFMCPFPP
Query: SFGNIYILLAVDYVSKWIEAIATTTIDAKVVMKIFMKNMFTRCGTSRFIISDEGSHFLNKIIANLFSKYNIRHRVATAYHPKTNGQVELFNIEIKAILEK
SFGN+YIL+AVDYVSKW+EA A D+KVV+ KN+FTR GT R IISD G+HF N+ L SKY ++H+++T YHP+T+GQVE+ N EIK ILEK
Subjt: SFGNIYILLAVDYVSKWIEAIATTTIDAKVVMKIFMKNMFTRCGTSRFIISDEGSHFLNKIIANLFSKYNIRHRVATAYHPKTNGQVELFNIEIKAILEK
Query: TVDPSKR
TV +++
Subjt: TVDPSKR
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| A0A2G9HBV9 DNA-directed DNA polymerase | 6.4e-93 | 54.43 | Show/hide |
Query: VSKLHIKIQDKKGTENQVADHLSRLGEEAQVKKGLDIQELVADEQILEVRAVELPWFADYVNYLVSGLKPPEETAQKPKKFLKDVKDYNWDELYLYKLGP
+ + ++I+D+KGTENQ+ADHLSRL A++ + I + +DEQ+L + A ++PW+AD VNYL G+ P + +AQ+ KK L D + Y WD+L+L+K GP
Subjt: VSKLHIKIQDKKGTENQVADHLSRLGEEAQVKKGLDIQELVADEQILEVRAVELPWFADYVNYLVSGLKPPEETAQKPKKFLKDVKDYNWDELYLYKLGP
Query: DQILRWCVTEEDVPLILEACHSAPYGGHFFGLKIASKVLQSRYFRPSLFKYAHLFTKNCDQCQRTGNLTAKSEMLLNFILEVEIFGVWGIDFMCPFPPSF
D ILR CV E ++ ILE CH++PYGGHF G + A+K+LQS +F P+LFK A+ F NCD+CQRTGN++ + EM LN ILEVE+F VWGIDFM F PSF
Subjt: DQILRWCVTEEDVPLILEACHSAPYGGHFFGLKIASKVLQSRYFRPSLFKYAHLFTKNCDQCQRTGNLTAKSEMLLNFILEVEIFGVWGIDFMCPFPPSF
Query: GNIYILLAVDYVSKWIEAIATTTIDAKVVMKIFMKNMFTRCGTSRFIISDEGSHFLNKIIANLFSKYNIRHRVATAYHPKTNGQVELFNIEIKAILEKTV
GN+YIL+AVDYVSKW+EA+A D+KVV+ KN+FTR GT R IIS+ G+HF N+ L SKY ++H+++T YHP+T+GQVE+ N EIK ILEKTV
Subjt: GNIYILLAVDYVSKWIEAIATTTIDAKVVMKIFMKNMFTRCGTSRFIISDEGSHFLNKIIANLFSKYNIRHRVATAYHPKTNGQVELFNIEIKAILEKTV
Query: DPSKR
+++
Subjt: DPSKR
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| A0A2G9HWF8 Reverse transcriptase | 1.8e-95 | 47.38 | Show/hide |
Query: LAVSKLHIKIQDKKGTENQVADHLSRLGEEAQVKKGLDIQELVADEQILEVRAVELPWFADYVNYLVSGLKPPEETAQKPKKFLKDVKDYNWDELYLYKL
L + + ++I+D+KG ENQ+ADHLSRL A+ + I + DEQ+L + A ++PW+AD VNYL G+ P + +AQ+ KKFL D + Y WD+ +L+K
Subjt: LAVSKLHIKIQDKKGTENQVADHLSRLGEEAQVKKGLDIQELVADEQILEVRAVELPWFADYVNYLVSGLKPPEETAQKPKKFLKDVKDYNWDELYLYKL
Query: GPDQILRWCVTEEDVPLILEACHSAPYGGHFFGLKIASKVLQSRYFRPSLFKYAHLFTKNCDQCQRTGNLTAKSEMLLNFILEVEIFGVWGIDFMCPFPP
GPD ILR CV E ++ I E CH++PYGGHF + A+K+LQS +F P+LFK H F NCD+CQRTGN++ + EM L ILEVE+F VWGIDFM PF P
Subjt: GPDQILRWCVTEEDVPLILEACHSAPYGGHFFGLKIASKVLQSRYFRPSLFKYAHLFTKNCDQCQRTGNLTAKSEMLLNFILEVEIFGVWGIDFMCPFPP
Query: SFGNIYILLAVDYVSKWIEAIATTTIDAKVVMKIFMKNMFTRCGTSRFIISDEGSHFLNKIIANLFSKYNIRHRVATAYHPKTNGQVELFNIEIKAILEK
SFGN+YIL+AVDY+SKW+EA+A D+KVV+ KN+FTR GT R IISD G+HF N+ L SKY ++H+++T YHP+T+GQVE+ N EIK LEK
Subjt: SFGNIYILLAVDYVSKWIEAIATTTIDAKVVMKIFMKNMFTRCGTSRFIISDEGSHFLNKIIANLFSKYNIRHRVATAYHPKTNGQVELFNIEIKAILEK
Query: TV-----DPSKRI----------------------------------------GHYDL---TRLELFLGKLKSRWSGPFEIVRIFDYGTVKLMDNQGIIS
TV D SKR+ G Y L +RL+LF KLKSRWS PF I + +G V+L +NQ +
Subjt: TV-----DPSKRI----------------------------------------GHYDL---TRLELFLGKLKSRWSGPFEIVRIFDYGTVKLMDNQGIIS
Query: R
R
Subjt: R
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| A0A2K3NJZ5 Integrase catalytic domain-containing protein (Fragment) | 3.3e-89 | 54.4 | Show/hide |
Query: LAVSKLHIKIQDKKGTENQVADHLSRLGEEAQVKKGLDIQELVADEQILEVRAVELPWFADYVNYLVSGLKPPEETAQKPKKFLKDVKDYNWDELYLYKL
L + + ++I+DKKG+EN VADHLSRL + ++ IQ+L DE IL V PWFAD+ NY+V P + T+Q+ KKFL D K Y WDE +LYK
Subjt: LAVSKLHIKIQDKKGTENQVADHLSRLGEEAQVKKGLDIQELVADEQILEVRAVELPWFADYVNYLVSGLKPPEETAQKPKKFLKDVKDYNWDELYLYKL
Query: GPDQILRWCVTEEDVPLILEACHSAPYGGHFFGLKIASKVLQSRYFRPSLFKYAHLFTKNCDQCQRTGNLTAKSEMLLNFILEVEIFGVWGIDFMCPFPP
G D +LR CV E++ +L CH + YGGHF G + A+KVLQS F P+LFK A + K CD+CQRTGN++ ++EM N +LEVEIF VWGIDFM PFP
Subjt: GPDQILRWCVTEEDVPLILEACHSAPYGGHFFGLKIASKVLQSRYFRPSLFKYAHLFTKNCDQCQRTGNLTAKSEMLLNFILEVEIFGVWGIDFMCPFPP
Query: SFGNIYILLAVDYVSKWIEAIATTTIDAKVVMKIFMKNMFTRCGTSRFIISDEGSHFLNKIIANLFSKYNIRHRVATAYHPKTNGQVELFNIEIKAILEK
S+ YIL+AVDYVSKW+EAIAT T DA+VV+ KN+F+R G R +ISDEG+HFLN+ + L KYN+ HR+AT YHP+T+GQVE+ N +IK ILEK
Subjt: SFGNIYILLAVDYVSKWIEAIATTTIDAKVVMKIFMKNMFTRCGTSRFIISDEGSHFLNKIIANLFSKYNIRHRVATAYHPKTNGQVELFNIEIKAILEK
Query: TVDPSKR
TV+ S++
Subjt: TVDPSKR
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| A0A803R2M6 Uncharacterized protein | 8.3e-93 | 56.96 | Show/hide |
Query: LAVSKLHIKIQDKKGTENQVADHLSRLG-EEAQVKKGLDIQELVADEQILEVR-AVELPWFADYVNYLVSGLKPPEETAQKPKKFLKDVKDYNWDELYLY
L + + + I+DKKGTEN VADHLSRL EE+Q K + I E DEQ+ VR ++ +PW+ADYVN+L + + PPE + Q+ KKF +VK Y W+E LY
Subjt: LAVSKLHIKIQDKKGTENQVADHLSRLG-EEAQVKKGLDIQELVADEQILEVR-AVELPWFADYVNYLVSGLKPPEETAQKPKKFLKDVKDYNWDELYLY
Query: KLGPDQILRWCVTEEDVPLILEACHSAPYGGHFFGLKIASKVLQSRYFRPSLFKYAHLFTKNCDQCQRTGNLTAKSEMLLNFILEVEIFGVWGIDFMCPF
K DQI+R CV EE++ IL CH+ P GGHF G + A+KVLQS +F P+LFK A F K CD+CQRTGN++ ++EM L ILEVE+F VWGIDFM PF
Subjt: KLGPDQILRWCVTEEDVPLILEACHSAPYGGHFFGLKIASKVLQSRYFRPSLFKYAHLFTKNCDQCQRTGNLTAKSEMLLNFILEVEIFGVWGIDFMCPF
Query: PPSFGNIYILLAVDYVSKWIEAIATTTIDAKVVMKIFMKNMFTRCGTSRFIISDEGSHFLNKIIANLFSKYNIRHRVATAYHPKTNGQVELFNIEIKAIL
P SF N+YILLAVDYVSKW+EA AT D K V++ KN+FTR GT R IISDEGSHF NK L S+Y +RHR A YHP++NGQ E+ N EIK IL
Subjt: PPSFGNIYILLAVDYVSKWIEAIATTTIDAKVVMKIFMKNMFTRCGTSRFIISDEGSHFLNKIIANLFSKYNIRHRVATAYHPKTNGQVELFNIEIKAIL
Query: EKTVDPSKR
EKTV S++
Subjt: EKTVDPSKR
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| SwissProt top hits | e value | %identity | Alignment |
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| P08361 Gag-Pol polyprotein | 7.7e-11 | 36.94 | Show/hide |
Query: WGIDFMCPFPPSFGNIYILLAVDYVSKWIEAIATTTIDAKVVMKIFMKNMFTRCGTSRFIISDEGSHFLNKIIANLFSKYNIRHRVATAYHPKTNGQVEL
W IDF P +G Y+L+ VD S WIEA T AKVV K ++ +F R G + + +D G F++K+ + I ++ AY P+++GQVE
Subjt: WGIDFMCPFPPSFGNIYILLAVDYVSKWIEAIATTTIDAKVVMKIFMKNMFTRCGTSRFIISDEGSHFLNKIIANLFSKYNIRHRVATAYHPKTNGQVEL
Query: FNIEIKAILEK
N IK L K
Subjt: FNIEIKAILEK
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| P10394 Retrovirus-related Pol polyprotein from transposon 412 | 1.3e-10 | 26.26 | Show/hide |
Query: EEDVPLILEACHSAPYGGHFFGLKIASKVLQSRYFRPSLFKYAHLFTKNCDQCQRTGNLT-AKSEMLLNFILEVEIFGVWGIDFMCPFPPS-FGNIYILL
E++ IL H P G G+ ++ Y+ ++ KY + + C +CQ+ K+ M + E F +D + P P S GN Y +
Subjt: EEDVPLILEACHSAPYGGHFFGLKIASKVLQSRYFRPSLFKYAHLFTKNCDQCQRTGNLT-AKSEMLLNFILEVEIFGVWGIDFMCPFPPS-FGNIYILL
Query: AVDYVSKWIEAIATTTIDAKVVMKIFMKNMFTRCGTSRFIISDEGSHFLNKIIANLFSKYNIRHRVATAYHPKTNGQVE
+ ++K++ AI AK V K ++ + G + I+D G+ + N II +L I++ +TA+H +T G VE
Subjt: AVDYVSKWIEAIATTTIDAKVVMKIFMKNMFTRCGTSRFIISDEGSHFLNKIIANLFSKYNIRHRVATAYHPKTNGQVE
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| P26808 Gag-Pol polyprotein | 1.3e-10 | 35.14 | Show/hide |
Query: WGIDFMCPFPPSFGNIYILLAVDYVSKWIEAIATTTIDAKVVMKIFMKNMFTRCGTSRFIISDEGSHFLNKIIANLFSKYNIRHRVATAYHPKTNGQVEL
W IDF P +G Y+L+ VD S W+EA T AKVV K ++ +F R G + + +D G F++K+ + + ++ AY P+++GQVE
Subjt: WGIDFMCPFPPSFGNIYILLAVDYVSKWIEAIATTTIDAKVVMKIFMKNMFTRCGTSRFIISDEGSHFLNKIIANLFSKYNIRHRVATAYHPKTNGQVEL
Query: FNIEIKAILEK
N IK L K
Subjt: FNIEIKAILEK
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| P26810 Gag-Pol polyprotein | 1.3e-10 | 35.14 | Show/hide |
Query: WGIDFMCPFPPSFGNIYILLAVDYVSKWIEAIATTTIDAKVVMKIFMKNMFTRCGTSRFIISDEGSHFLNKIIANLFSKYNIRHRVATAYHPKTNGQVEL
W IDF P +G Y+L+ VD S W+EA T AKVV K ++ +F R G + + +D G F++K+ + + ++ AY P+++GQVE
Subjt: WGIDFMCPFPPSFGNIYILLAVDYVSKWIEAIATTTIDAKVVMKIFMKNMFTRCGTSRFIISDEGSHFLNKIIANLFSKYNIRHRVATAYHPKTNGQVEL
Query: FNIEIKAILEK
N IK L K
Subjt: FNIEIKAILEK
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| P92516 Uncharacterized mitochondrial protein AtMg00750 | 5.9e-11 | 57.14 | Show/hide |
Query: VLQSRYFRPSLFKYAHLFTKNCDQCQRTGNLTAKSEMLLNFILEVEIFGVWGIDFM
VLQ+ ++ P+ FK AH F +CD CQR GN T ++EM +FILEVE+F VWGI FM
Subjt: VLQSRYFRPSLFKYAHLFTKNCDQCQRTGNLTAKSEMLLNFILEVEIFGVWGIDFM
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