; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0022529 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0022529
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionLINE-1 retrotransposable element ORF2 protein
Genome locationchr7:31756508..31758028
RNA-Seq ExpressionLag0022529
SyntenyLag0022529
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
BBH07150.1 TatD related DNase [Prunus dulcis]3.6e-1839.16Show/hide
Query:  EAPGKWKGYRFMGKLRALRRTLKSWNKEAFGDVRVKKQEVVSRITEID---------SQEEGEKR--------------------LRLPFFMEEIKKADF
        + PG W+GY+FM +L+ L+  LK W+KE FGDV    +E  +R+   D         ++EE  +                     L  PF +EE++KA F
Subjt:  EAPGKWKGYRFMGKLRALRRTLKSWNKEAFGDVRVKKQEVVSRITEID---------SQEEGEKR--------------------LRLPFFMEEIKKADF

Query:  DCDRDKSPGPDGFSMAFFQDNWTDIKGDLERVFKEFYDRGILD
        DC +DKSPGPDGFSM+FFQ  W  +KGDL +V ++F+  GI++
Subjt:  DCDRDKSPGPDGFSMAFFQDNWTDIKGDLERVFKEFYDRGILD

RVW38710.1 Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera]5.6e-1937.28Show/hide
Query:  VARVSKKKSPKVGRSFGTTSVPCLGYVGIIGAFWETLVLSVPLGKGFGREAPGKWKGYRFMGKLRALRRTLKSWNKEAFGDVRVKKQEVVSRITEIDSQE
        ++ V    SP + + F    V      G+    W TL +      G G +  G W+GY+FM +L+ ++  LK WNK +FG+++ KK+ +++ +   D+ E
Subjt:  VARVSKKKSPKVGRSFGTTSVPCLGYVGIIGAFWETLVLSVPLGKGFGREAPGKWKGYRFMGKLRALRRTLKSWNKEAFGDVRVKKQEVVSRITEIDSQE

Query:  E----GEKRLRLPFFMEEIKKADFDCDRDKSPGPDGFSMAFFQDNWTDIKGDLERVFKEFYDRGILDNS
        +        L   F  EEI KA F  DRDK+PGPDGF++A FQ+ W  IK DL RVF EF+  GI++ S
Subjt:  E----GEKRLRLPFFMEEIKKADFDCDRDKSPGPDGFSMAFFQDNWTDIKGDLERVFKEFYDRGILDNS

RVW62761.1 Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera]3.6e-1842.31Show/hide
Query:  WKGYRFMGKLRALRRTLKSWNKEAFGDVRVKKQEVVSRITEIDS--QEEGEK-----------------RLRLPFFMEEIKKADFDCDRDKSPGPDGFSM
        W+G++FM +L+ ++  LK WNK +FG+++ KK+ +++ +   D+  QE GE                  RL  PF  EEI KA F  DRDK+PGPDGF++
Subjt:  WKGYRFMGKLRALRRTLKSWNKEAFGDVRVKKQEVVSRITEIDS--QEEGEK-----------------RLRLPFFMEEIKKADFDCDRDKSPGPDGFSM

Query:  AFFQDNWTDIKGDLERVFKEFYDRGILDNS
        A FQ+ W  IK DL RVF EF+  GI++ S
Subjt:  AFFQDNWTDIKGDLERVFKEFYDRGILDNS

RVW70180.1 hypothetical protein CK203_057138 [Vitis vinifera]5.0e-2044.64Show/hide
Query:  WKGYRFMGKLRALRRTLKSWNKEAFGDVRVKKQEVVSRITEIDSQEEGEKRLRLPFFMEEIKKADFDCDRDKSPGPDGFSMAFFQDNWTDIKGDLERVFK
        W+G++FM +L+ ++  LK WNK +FG++  +K+ +++ +  +D+ E+   RL   F  EEI KA F  DRDK+PGPDGF++A FQD W  +K DL RVF 
Subjt:  WKGYRFMGKLRALRRTLKSWNKEAFGDVRVKKQEVVSRITEIDSQEEGEKRLRLPFFMEEIKKADFDCDRDKSPGPDGFSMAFFQDNWTDIKGDLERVFK

Query:  EFYDRGILDNSL
        EF+  GI+  +L
Subjt:  EFYDRGILDNSL

RVW81340.1 putative mitochondrial protein [Vitis vinifera]4.3e-1942.31Show/hide
Query:  REAPGK-WKGYRFMGKLRALRRTLKSWNKEAFGDVRVKKQEVVSRITEIDSQE------------EGEKRLRLPFFMEEIKKADFDCDRDKSPGPDGFSM
        RE  G  W+G++FM +L+ ++  LK+WNK +FG++  +K+ ++  +   D+ E            E   RL  PF  EEI KA F  DRDK+PGP+GF++
Subjt:  REAPGK-WKGYRFMGKLRALRRTLKSWNKEAFGDVRVKKQEVVSRITEIDSQE------------EGEKRLRLPFFMEEIKKADFDCDRDKSPGPDGFSM

Query:  AFFQDNWTDIKGDLERVFKEFYDRGILDNS
        A FQD W  IK DL RVF EF+  GI++ S
Subjt:  AFFQDNWTDIKGDLERVFKEFYDRGILDNS

TrEMBL top hitse value%identityAlignment
A0A438DTG0 Transposon TX1 uncharacterized 149 kDa protein2.7e-1937.28Show/hide
Query:  VARVSKKKSPKVGRSFGTTSVPCLGYVGIIGAFWETLVLSVPLGKGFGREAPGKWKGYRFMGKLRALRRTLKSWNKEAFGDVRVKKQEVVSRITEIDSQE
        ++ V    SP + + F    V      G+    W TL +      G G +  G W+GY+FM +L+ ++  LK WNK +FG+++ KK+ +++ +   D+ E
Subjt:  VARVSKKKSPKVGRSFGTTSVPCLGYVGIIGAFWETLVLSVPLGKGFGREAPGKWKGYRFMGKLRALRRTLKSWNKEAFGDVRVKKQEVVSRITEIDSQE

Query:  E----GEKRLRLPFFMEEIKKADFDCDRDKSPGPDGFSMAFFQDNWTDIKGDLERVFKEFYDRGILDNS
        +        L   F  EEI KA F  DRDK+PGPDGF++A FQ+ W  IK DL RVF EF+  GI++ S
Subjt:  E----GEKRLRLPFFMEEIKKADFDCDRDKSPGPDGFSMAFFQDNWTDIKGDLERVFKEFYDRGILDNS

A0A438FS45 Transposon TX1 uncharacterized 149 kDa protein1.7e-1842.31Show/hide
Query:  WKGYRFMGKLRALRRTLKSWNKEAFGDVRVKKQEVVSRITEIDS--QEEGEK-----------------RLRLPFFMEEIKKADFDCDRDKSPGPDGFSM
        W+G++FM +L+ ++  LK WNK +FG+++ KK+ +++ +   D+  QE GE                  RL  PF  EEI KA F  DRDK+PGPDGF++
Subjt:  WKGYRFMGKLRALRRTLKSWNKEAFGDVRVKKQEVVSRITEIDS--QEEGEK-----------------RLRLPFFMEEIKKADFDCDRDKSPGPDGFSM

Query:  AFFQDNWTDIKGDLERVFKEFYDRGILDNS
        A FQ+ W  IK DL RVF EF+  GI++ S
Subjt:  AFFQDNWTDIKGDLERVFKEFYDRGILDNS

A0A438GDC0 Reverse transcriptase domain-containing protein2.4e-2044.64Show/hide
Query:  WKGYRFMGKLRALRRTLKSWNKEAFGDVRVKKQEVVSRITEIDSQEEGEKRLRLPFFMEEIKKADFDCDRDKSPGPDGFSMAFFQDNWTDIKGDLERVFK
        W+G++FM +L+ ++  LK WNK +FG++  +K+ +++ +  +D+ E+   RL   F  EEI KA F  DRDK+PGPDGF++A FQD W  +K DL RVF 
Subjt:  WKGYRFMGKLRALRRTLKSWNKEAFGDVRVKKQEVVSRITEIDSQEEGEKRLRLPFFMEEIKKADFDCDRDKSPGPDGFSMAFFQDNWTDIKGDLERVFK

Query:  EFYDRGILDNSL
        EF+  GI+  +L
Subjt:  EFYDRGILDNSL

A0A438HA62 Putative mitochondrial protein2.1e-1942.31Show/hide
Query:  REAPGK-WKGYRFMGKLRALRRTLKSWNKEAFGDVRVKKQEVVSRITEIDSQE------------EGEKRLRLPFFMEEIKKADFDCDRDKSPGPDGFSM
        RE  G  W+G++FM +L+ ++  LK+WNK +FG++  +K+ ++  +   D+ E            E   RL  PF  EEI KA F  DRDK+PGP+GF++
Subjt:  REAPGK-WKGYRFMGKLRALRRTLKSWNKEAFGDVRVKKQEVVSRITEIDSQE------------EGEKRLRLPFFMEEIKKADFDCDRDKSPGPDGFSM

Query:  AFFQDNWTDIKGDLERVFKEFYDRGILDNS
        A FQD W  IK DL RVF EF+  GI++ S
Subjt:  AFFQDNWTDIKGDLERVFKEFYDRGILDNS

A0A4Y1RS61 TatD related DNase1.7e-1839.16Show/hide
Query:  EAPGKWKGYRFMGKLRALRRTLKSWNKEAFGDVRVKKQEVVSRITEID---------SQEEGEKR--------------------LRLPFFMEEIKKADF
        + PG W+GY+FM +L+ L+  LK W+KE FGDV    +E  +R+   D         ++EE  +                     L  PF +EE++KA F
Subjt:  EAPGKWKGYRFMGKLRALRRTLKSWNKEAFGDVRVKKQEVVSRITEID---------SQEEGEKR--------------------LRLPFFMEEIKKADF

Query:  DCDRDKSPGPDGFSMAFFQDNWTDIKGDLERVFKEFYDRGILD
        DC +DKSPGPDGFSM+FFQ  W  +KGDL +V ++F+  GI++
Subjt:  DCDRDKSPGPDGFSMAFFQDNWTDIKGDLERVFKEFYDRGILD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G43760.1 DNAse I-like superfamily protein9.2e-0440Show/hide
Query:  EEIKKADFDCDRDKSPGPDGFSMAFFQDNWTDIKGDLERVFKEFYDRGIL
        +EI  A F   R+K+PGPD F+  FF ++W  +K       KEF+  G L
Subjt:  EEIKKADFDCDRDKSPGPDGFSMAFFQDNWTDIKGDLERVFKEFYDRGIL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCACCAATCAAGAATGGCGGCTAGGGTTCCAACGGCGGCGGTGGCTAGGGTTTCAAAGAAAAAAAGCCCAAAGGTAGGAAGGAGTTTTGGAACGACCTCGGTGCCTTG
TTTGGGTTATGTGGGCATCATTGGTGCATTTTGGGAGACTTTAGTGTTGTCTGTTCCCCTCGGAAAAGGCTTCGGGAGGGAGGCTCCTGGGAAGTGGAAAGGATATAGGT
TTATGGGTAAATTAAGAGCCCTTAGGAGAACTCTTAAATCGTGGAATAAAGAGGCCTTTGGTGATGTTAGGGTTAAGAAGCAAGAAGTGGTGAGTAGGATTACAGAGATT
GATTCTCAGGAAGAGGGAGAAAAACGACTTAGACTCCCCTTTTTTATGGAGGAAATCAAGAAAGCGGATTTTGATTGTGATAGAGATAAATCCCCAGGTCCGGATGGTTT
TTCCATGGCCTTTTTTCAAGATAACTGGACAGATATTAAGGGGGATTTGGAGCGTGTTTTTAAAGAATTCTATGATCGAGGCATTTTAGATAACTCCTTGAGGGGCCGTT
TGTTTTTTGGGAATTTAGATAACTGGAATATTCAAATGCCTGGAATTATAGATACCCGGAAATATAGATGCCCGGCATTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGCACCAATCAAGAATGGCGGCTAGGGTTCCAACGGCGGCGGTGGCTAGGGTTTCAAAGAAAAAAAGCCCAAAGGTAGGAAGGAGTTTTGGAACGACCTCGGTGCCTTG
TTTGGGTTATGTGGGCATCATTGGTGCATTTTGGGAGACTTTAGTGTTGTCTGTTCCCCTCGGAAAAGGCTTCGGGAGGGAGGCTCCTGGGAAGTGGAAAGGATATAGGT
TTATGGGTAAATTAAGAGCCCTTAGGAGAACTCTTAAATCGTGGAATAAAGAGGCCTTTGGTGATGTTAGGGTTAAGAAGCAAGAAGTGGTGAGTAGGATTACAGAGATT
GATTCTCAGGAAGAGGGAGAAAAACGACTTAGACTCCCCTTTTTTATGGAGGAAATCAAGAAAGCGGATTTTGATTGTGATAGAGATAAATCCCCAGGTCCGGATGGTTT
TTCCATGGCCTTTTTTCAAGATAACTGGACAGATATTAAGGGGGATTTGGAGCGTGTTTTTAAAGAATTCTATGATCGAGGCATTTTAGATAACTCCTTGAGGGGCCGTT
TGTTTTTTGGGAATTTAGATAACTGGAATATTCAAATGCCTGGAATTATAGATACCCGGAAATATAGATGCCCGGCATTTTAG
Protein sequenceShow/hide protein sequence
MHQSRMAARVPTAAVARVSKKKSPKVGRSFGTTSVPCLGYVGIIGAFWETLVLSVPLGKGFGREAPGKWKGYRFMGKLRALRRTLKSWNKEAFGDVRVKKQEVVSRITEI
DSQEEGEKRLRLPFFMEEIKKADFDCDRDKSPGPDGFSMAFFQDNWTDIKGDLERVFKEFYDRGILDNSLRGRLFFGNLDNWNIQMPGIIDTRKYRCPAF