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Lag0022542 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0022542
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRrna intron-encoded homing endonuclease
Genome locationchr7:32223862..32224259
RNA-Seq ExpressionLag0022542
SyntenyLag0022542
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0015074 - DNA integration (biological process)
GO:0090305 - nucleic acid phosphodiester bond hydrolysis (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0004519 - endonuclease activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0051481.1 reverse transcriptase [Cucumis melo var. makuwa]7.1e-3585.87Show/hide
Query:  MRRHPSVASFLEGLWPLRPRKFEAITDHCNFGLQRGIPSKRESSARVDYVPALCTHRLSLLPIEWSGEVFRSRRRGRFAARDVARSPLNLII
        MRR+PS ASFLEGLWPLRPRKFEAIT         GIPSKRESSARVDYVPALCTHR SLLPIEWSGEVF SRRRGRFAARDVARSPLNLII
Subjt:  MRRHPSVASFLEGLWPLRPRKFEAITDHCNFGLQRGIPSKRESSARVDYVPALCTHRLSLLPIEWSGEVFRSRRRGRFAARDVARSPLNLII

KAF7800521.1 atp synthase subunit beta [Senna tora]2.1e-2675Show/hide
Query:  MRRHPSVASFLEGLWPLRPRKFEAITDHCNFGLQRGIPSKRESSARVDYVPALCTHRLSLLPIEWSGEVFRSRRRGRFAARDVARSPL
        MRR PS ASFLEGLWPLRPRKFEAIT         GIPSKRESSARVDYVPALCTHR SLLPIEWSGEVF SRRRGR         PL
Subjt:  MRRHPSVASFLEGLWPLRPRKFEAITDHCNFGLQRGIPSKRESSARVDYVPALCTHRLSLLPIEWSGEVFRSRRRGRFAARDVARSPL

KAG5129005.1 hypothetical protein JHK84_035402 [Glycine max]5.1e-2576.47Show/hide
Query:  ASFLEGLWPLRPRKFEAITDHCNFGLQRGIPSKRESSARVDYVPALCTHRLSLLPIEWSGEVFRSRRRGRFAARDVARSPLNLII
        ASFLEGLWPLRPRKFEAIT               ESSARVDYVPALCTHR SLLPIEWSGEVF  RRR RFAARDV RSPLNLII
Subjt:  ASFLEGLWPLRPRKFEAITDHCNFGLQRGIPSKRESSARVDYVPALCTHRLSLLPIEWSGEVFRSRRRGRFAARDVARSPLNLII

KAG8365712.1 hypothetical protein BUALT_Bualt17G0000400 [Buddleja alternifolia]3.3e-2496.72Show/hide
Query:  GLQRGIPSKRESSARVDYVPALCTHRLSLLPIEWSGEVFRSRRRGRFAARDVARSPLNLII
        GLQRGIPSKRESSARVDYVPALCTHR SLLPIEWSGEVF SRRRGRFAARDVARSPLNLII
Subjt:  GLQRGIPSKRESSARVDYVPALCTHRLSLLPIEWSGEVFRSRRRGRFAARDVARSPLNLII

XP_012440607.1 PREDICTED: uncharacterized protein LOC105765883 [Gossypium raimondii]3.3e-2496.72Show/hide
Query:  GLQRGIPSKRESSARVDYVPALCTHRLSLLPIEWSGEVFRSRRRGRFAARDVARSPLNLII
        GLQRGIPSKRESSARVDYVPALCTHR SLLPIEWSGEVF SRRRGRFAARDVARSPLNLII
Subjt:  GLQRGIPSKRESSARVDYVPALCTHRLSLLPIEWSGEVFRSRRRGRFAARDVARSPLNLII

TrEMBL top hitse value%identityAlignment
A0A0R0GR40 Uncharacterized protein9.3e-2589.39Show/hide
Query:  DHCNFGLQRGIPSKRESSARVDYVPALCTHRLSLLPIEWSGEVFRSRRRGRFAARDVARSPLNLII
        DHC  GLQRGIPSKRESSARVDYVPALCTHR SLLPIEWSGEVF  RRR RFAARDV RSPLNLII
Subjt:  DHCNFGLQRGIPSKRESSARVDYVPALCTHRLSLLPIEWSGEVFRSRRRGRFAARDVARSPLNLII

A0A453IV10 Uncharacterized protein1.3e-2386.57Show/hide
Query:  DHCN-FGLQRGIPSKRESSARVDYVPALCTHRLSLLPIEWSGEVFRSRRRGRFAARDVARSPLNLII
        DHCN +   RG+PSKRESSARVDYVPALCTHR SLLPIEWSGEVF SRRRGRFAA DVARSPLNLII
Subjt:  DHCN-FGLQRGIPSKRESSARVDYVPALCTHRLSLLPIEWSGEVFRSRRRGRFAARDVARSPLNLII

A0A4U5PNX9 Uncharacterized protein1.0e-2395.08Show/hide
Query:  GLQRGIPSKRESSARVDYVPALCTHRLSLLPIEWSGEVFRSRRRGRFAARDVARSPLNLII
        GLQRGIPSKRESSARVDYVPALCTHR SLLPIEWSGEVF SRRRGRFAA DVARSPLNLII
Subjt:  GLQRGIPSKRESSARVDYVPALCTHRLSLLPIEWSGEVFRSRRRGRFAARDVARSPLNLII

A0A5A7UD54 Reverse transcriptase3.4e-3585.87Show/hide
Query:  MRRHPSVASFLEGLWPLRPRKFEAITDHCNFGLQRGIPSKRESSARVDYVPALCTHRLSLLPIEWSGEVFRSRRRGRFAARDVARSPLNLII
        MRR+PS ASFLEGLWPLRPRKFEAIT         GIPSKRESSARVDYVPALCTHR SLLPIEWSGEVF SRRRGRFAARDVARSPLNLII
Subjt:  MRRHPSVASFLEGLWPLRPRKFEAITDHCNFGLQRGIPSKRESSARVDYVPALCTHRLSLLPIEWSGEVFRSRRRGRFAARDVARSPLNLII

A0A5C7H450 Uncharacterized protein1.3e-2395.08Show/hide
Query:  GLQRGIPSKRESSARVDYVPALCTHRLSLLPIEWSGEVFRSRRRGRFAARDVARSPLNLII
        GLQRGIPSKRESSARVDYVPALCTHR SLLPIEWSGEVF SRRRGRFAA DVARSPLNLII
Subjt:  GLQRGIPSKRESSARVDYVPALCTHRLSLLPIEWSGEVFRSRRRGRFAARDVARSPLNLII

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGGAGGCATCCCTCCGTGGCCAGCTTCTTAGAGGGACTATGGCCGCTTAGGCCAAGGAAGTTTGAGGCAATAACAGATCATTGCAATTTTGGTCTTCAACGAGGAAT
TCCTAGTAAGCGCGAGTCATCAGCTCGCGTTGACTACGTCCCTGCCCTTTGTACACACCGTCTGTCGCTCCTACCGATTGAATGGTCCGGTGAAGTGTTCAGATCACGAC
GACGTGGGCGGTTCGCTGCCCGCGACGTCGCGAGAAGTCCACTGAACCTTATCATTTAG
mRNA sequenceShow/hide mRNA sequence
ATGCGGAGGCATCCCTCCGTGGCCAGCTTCTTAGAGGGACTATGGCCGCTTAGGCCAAGGAAGTTTGAGGCAATAACAGATCATTGCAATTTTGGTCTTCAACGAGGAAT
TCCTAGTAAGCGCGAGTCATCAGCTCGCGTTGACTACGTCCCTGCCCTTTGTACACACCGTCTGTCGCTCCTACCGATTGAATGGTCCGGTGAAGTGTTCAGATCACGAC
GACGTGGGCGGTTCGCTGCCCGCGACGTCGCGAGAAGTCCACTGAACCTTATCATTTAG
Protein sequenceShow/hide protein sequence
MRRHPSVASFLEGLWPLRPRKFEAITDHCNFGLQRGIPSKRESSARVDYVPALCTHRLSLLPIEWSGEVFRSRRRGRFAARDVARSPLNLII