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Lag0022549 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0022549
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionIntegrase catalytic domain-containing protein
Genome locationchr7:32421200..32424781
RNA-Seq ExpressionLag0022549
SyntenyLag0022549
Gene Ontology termsGO:0006468 - protein phosphorylation (biological process)
GO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004672 - protein kinase activity (molecular function)
GO:0005524 - ATP binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
BBH07151.1 transposable element gene [Prunus dulcis]3.9e-0664.58Show/hide
Query:  DLEIKDKKGSENVIADHLPRL-DPSSSLLQQSAISDSFPDEQLFAVKV
        DLEI+DKKGSENV+ADHL RL  P+++      +S+SFPDEQLFAVK+
Subjt:  DLEIKDKKGSENVIADHLPRL-DPSSSLLQQSAISDSFPDEQLFAVKV
BBN67648.1 transposable element gene [Prunus dulcis]3.9e-0664.58Show/hide
Query:  DLEIKDKKGSENVIADHLPRL-DPSSSLLQQSAISDSFPDEQLFAVKV
        DLEI+DKKGSENV+ADHL RL  P+++      +S+SFPDEQLFAVK+
Subjt:  DLEIKDKKGSENVIADHLPRL-DPSSSLLQQSAISDSFPDEQLFAVKV
BBN67882.1 transposable element gene [Prunus dulcis]3.9e-0664.58Show/hide
Query:  DLEIKDKKGSENVIADHLPRL-DPSSSLLQQSAISDSFPDEQLFAVKV
        DLEI+DKKGSENV+ADHL RL  P+++      +S+SFPDEQLFAVK+
Subjt:  DLEIKDKKGSENVIADHLPRL-DPSSSLLQQSAISDSFPDEQLFAVKV
VVA34849.1 PREDICTED: LOW QUALITY PROTEIN, partial [Prunus dulcis]3.9e-0664.58Show/hide
Query:  DLEIKDKKGSENVIADHLPRL-DPSSSLLQQSAISDSFPDEQLFAVKV
        DLEI+DKKGSENV+ADHL RL  P+++      +S+SFPDEQLFAVK+
Subjt:  DLEIKDKKGSENVIADHLPRL-DPSSSLLQQSAISDSFPDEQLFAVKV
XP_028962991.1 LOW QUALITY PROTEIN: uncharacterized protein LOC103419262 [Malus domestica]3.9e-0663.83Show/hide
Query:  DLEIKDKKGSENVIADHLPRLDPSSSLLQQSAISDSFPDEQLFAVKV
        DLEIKDKKGSENV+ADHL RL  S++      +S+SFPDEQLF++K+
Subjt:  DLEIKDKKGSENVIADHLPRLDPSSSLLQQSAISDSFPDEQLFAVKV
TrEMBL top hitse value%identityAlignment
A0A4Y1QWW5 Reverse transcriptase1.9e-0664.58Show/hide
Query:  DLEIKDKKGSENVIADHLPRL-DPSSSLLQQSAISDSFPDEQLFAVKV
        DLEI+DKKGSENV+ADHL RL  P+++      +S+SFPDEQLFAVK+
Subjt:  DLEIKDKKGSENVIADHLPRL-DPSSSLLQQSAISDSFPDEQLFAVKV
A0A4Y1QWW9 Reverse transcriptase1.9e-0664.58Show/hide
Query:  DLEIKDKKGSENVIADHLPRL-DPSSSLLQQSAISDSFPDEQLFAVKV
        DLEI+DKKGSENV+ADHL RL  P+++      +S+SFPDEQLFAVK+
Subjt:  DLEIKDKKGSENVIADHLPRL-DPSSSLLQQSAISDSFPDEQLFAVKV
A0A4Y1RS08 Transposable element protein1.9e-0664.58Show/hide
Query:  DLEIKDKKGSENVIADHLPRL-DPSSSLLQQSAISDSFPDEQLFAVKV
        DLEI+DKKGSENV+ADHL RL  P+++      +S+SFPDEQLFAVK+
Subjt:  DLEIKDKKGSENVIADHLPRL-DPSSSLLQQSAISDSFPDEQLFAVKV
A0A5E4G4Z4 PREDICTED: LOW QUALITY PROTEIN (Fragment)1.9e-0664.58Show/hide
Query:  DLEIKDKKGSENVIADHLPRL-DPSSSLLQQSAISDSFPDEQLFAVKV
        DLEI+DKKGSENV+ADHL RL  P+++      +S+SFPDEQLFAVK+
Subjt:  DLEIKDKKGSENVIADHLPRL-DPSSSLLQQSAISDSFPDEQLFAVKV
A0A5H2XH13 Transposable element protein1.9e-0664.58Show/hide
Query:  DLEIKDKKGSENVIADHLPRL-DPSSSLLQQSAISDSFPDEQLFAVKV
        DLEI+DKKGSENV+ADHL RL  P+++      +S+SFPDEQLFAVK+
Subjt:  DLEIKDKKGSENVIADHLPRL-DPSSSLLQQSAISDSFPDEQLFAVKV
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCCATCTCCAGTATTTTTTTGGCCTTCGCTGGGTTTTCTGCACCACCACCATCCAGCAGCAGATCTCGCCGTCTCCGCTCAGCATCTCCGGTGGCATCTTCGGTTGC
AGCGACGTTCGGTTTCGGAATTGACTTGGAGATAAAGGACAAGAAGGGATCAGAAAATGTCATTGCAGATCATTTGCCTCGTCTTGATCCATCATCATCTTTGCTGCAGC
AATCTGCCATTTCAGATTCTTTTCCAGATGAACAGCTTTTTGCTGTTAAGGTGATGAAGCAAAGGAAATCCTGGCGCAATGTCACTCTTCGCCATATGGAGGCCATTTCA
GCGGACAGAGGACAACTATGA
mRNA sequenceShow/hide mRNA sequence
ATGCCCATCTCCAGTATTTTTTTGGCCTTCGCTGGGTTTTCTGCACCACCACCATCCAGCAGCAGATCTCGCCGTCTCCGCTCAGCATCTCCGGTGGCATCTTCGGTTGC
AGCGACGTTCGGTTTCGGAATTGACTTGGAGATAAAGGACAAGAAGGGATCAGAAAATGTCATTGCAGATCATTTGCCTCGTCTTGATCCATCATCATCTTTGCTGCAGC
AATCTGCCATTTCAGATTCTTTTCCAGATGAACAGCTTTTTGCTGTTAAGGTGATGAAGCAAAGGAAATCCTGGCGCAATGTCACTCTTCGCCATATGGAGGCCATTTCA
GCGGACAGAGGACAACTATGA
Protein sequenceShow/hide protein sequence
MPISSIFLAFAGFSAPPPSSSRSRRLRSASPVASSVAATFGFGIDLEIKDKKGSENVIADHLPRLDPSSSLLQQSAISDSFPDEQLFAVKVMKQRKSWRNVTLRHMEAIS
ADRGQL