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Lag0022565 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0022565
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionUnknown protein
Genome locationchr7:33085738..33086196
RNA-Seq ExpressionLag0022565
SyntenyLag0022565
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF7834790.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Senna tora]6.3e-0429.79Show/hide
Query:  MEKLQALKDNISVNLASKNLPSINMASTEGQKTSFQALNSNTYNQNRSFTPNQNIGYSSNRGGKYNNRGRYSTYPP----NNRPICQLYGKMGHTAVICH
        +E L+   DNIS N+          A++     S +  + ++  Q  SF PN + G      G+ NNRGR    P     NNRP+CQ+ G+ GH A+ C+
Subjt:  MEKLQALKDNISVNLASKNLPSINMASTEGQKTSFQALNSNTYNQNRSFTPNQNIGYSSNRGGKYNNRGRYSTYPP----NNRPICQLYGKMGHTAVICH

Query:  HQYEKPEANAGSSSTQHSSQHTSSQEPSSSTPIAMMVYPEI
        H+++  +AN  ++  Q  SQ+   +  S+  P      P++
Subjt:  HQYEKPEANAGSSSTQHSSQHTSSQEPSSSTPIAMMVYPEI
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAAAACTCCAAGCCTTGAAGGACAATATTTCTGTAAATTTGGCCTCTAAAAATCTGCCATCCATAAATATGGCAAGTACAGAAGGACAAAAAACTTCCTTTCAAGC
TTTAAATAGCAACACCTATAATCAGAATCGAAGCTTTACTCCCAATCAGAACATAGGTTATTCATCCAATAGAGGAGGGAAATACAATAATCGCGGTCGTTATTCCACAT
ATCCTCCCAACAACCGCCCCATTTGCCAACTATATGGCAAGATGGGACACACCGCTGTCATTTGCCATCATCAATATGAAAAACCCGAAGCTAATGCTGGAAGTTCCTCC
ACCCAACACTCATCCCAGCATACATCTTCTCAGGAACCAAGCTCCAGCACTCCTATTGCTATGATGGTGTATCCTGAAATTCTTAAGACCATTTGTGGTACTTGGATAGT
GGAGCAAGCGACCATGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAAAAACTCCAAGCCTTGAAGGACAATATTTCTGTAAATTTGGCCTCTAAAAATCTGCCATCCATAAATATGGCAAGTACAGAAGGACAAAAAACTTCCTTTCAAGC
TTTAAATAGCAACACCTATAATCAGAATCGAAGCTTTACTCCCAATCAGAACATAGGTTATTCATCCAATAGAGGAGGGAAATACAATAATCGCGGTCGTTATTCCACAT
ATCCTCCCAACAACCGCCCCATTTGCCAACTATATGGCAAGATGGGACACACCGCTGTCATTTGCCATCATCAATATGAAAAACCCGAAGCTAATGCTGGAAGTTCCTCC
ACCCAACACTCATCCCAGCATACATCTTCTCAGGAACCAAGCTCCAGCACTCCTATTGCTATGATGGTGTATCCTGAAATTCTTAAGACCATTTGTGGTACTTGGATAGT
GGAGCAAGCGACCATGTAA
Protein sequenceShow/hide protein sequence
MEKLQALKDNISVNLASKNLPSINMASTEGQKTSFQALNSNTYNQNRSFTPNQNIGYSSNRGGKYNNRGRYSTYPPNNRPICQLYGKMGHTAVICHHQYEKPEANAGSSS
TQHSSQHTSSQEPSSSTPIAMMVYPEILKTICGTWIVEQATM