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Lag0022570 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0022570
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr7:33165431..33166745
RNA-Seq ExpressionLag0022570
SyntenyLag0022570
Gene Ontology termsGO:0016020 - membrane (cellular component)
GO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0054466.1 putative non-LTR retroelement reverse transcriptase [Cucumis melo var. makuwa]2.4e-0633.03Show/hide
Query:  LKNHYVNHSRDENNNWKEDVVRQNFLRMDTDDILNMPTGSKEAKDKIIWGVDEKGTFTVKSAYHLALDLNELLSASQSDKCKQNSFRKRKKGVHHPVIWE
        LK   V+   +    W ED+++  F++ D + ILNMP  S+++ D I WG D KG F++KSAYH A++     S  ++   K  +   R+KG    V+  
Subjt:  LKNHYVNHSRDENNNWKEDVVRQNFLRMDTDDILNMPTGSKEAKDKIIWGVDEKGTFTVKSAYHLALDLNELLSASQSDKCKQNSFRKRKKGVHHPVIWE

Query:  CNSSIKEKL
          S  + K+
Subjt:  CNSSIKEKL

KAB2633991.1 hypothetical protein D8674_036633 [Pyrus ussuriensis x Pyrus communis]5.4e-0646.55Show/hide
Query:  ENNNWKEDVVRQNFLRMDTDDILNMPTGSKEAKDKIIWGVDEKGTFTVKSAYHLALDL
        EN  WKE+V+ + F  ++ + I+++P   +  +DK+IW  D+KG F+VKSAYH+ALDL
Subjt:  ENNNWKEDVVRQNFLRMDTDDILNMPTGSKEAKDKIIWGVDEKGTFTVKSAYHLALDL

KAE8791021.1 Alanyl-tRNA synthetase [Hordeum vulgare]5.4e-0636.36Show/hide
Query:  NNNWKEDVVRQNFLRMDTDDILNMPTGSKEAKDKIIWGVDEKGTFTVKSAYHLALDLNELLSASQSDKCKQNSFRKR
        NN+W  D+VRQ+F   + + ILN+P      +D + W +++ G +TVKSAY   +  NEL S  ++   + +S  KR
Subjt:  NNNWKEDVVRQNFLRMDTDDILNMPTGSKEAKDKIIWGVDEKGTFTVKSAYHLALDLNELLSASQSDKCKQNSFRKR

XP_030939647.1 uncharacterized protein LOC115964488 [Quercus lobata]2.4e-0638.14Show/hide
Query:  ENNNWKEDVVRQNFLRMDTDDILNMPTGSKEAKDKIIWGVDEKGTFTVKSAYHLALDLNELLSASQSDKCKQNSFRKRKKGVHHPVIWECNSSIKEK
        E+N WK DVV QNFL  D + IL++P  +  A+DKI+W  D+ G F V+S Y +A  + + +   +S    Q   RK  KG     +W  N   K K
Subjt:  ENNNWKEDVVRQNFLRMDTDDILNMPTGSKEAKDKIIWGVDEKGTFTVKSAYHLALDLNELLSASQSDKCKQNSFRKRKKGVHHPVIWECNSSIKEK

XP_042962354.1 uncharacterized protein LOC122296618 [Carya illinoinensis]2.0e-0826.85Show/hide
Query:  DENNNWKEDVVRQNFLRMDTDDILNMPTGSKEAKDKIIWGVDEKGTFTVKSAYHLALDLNELLSASQSDKCKQNSFRKRKKGVHHP-VIWECNSSIKEKL
        ++   W E+ +R  F   +T+ IL++P    +A+DKIIWG  +KG FT+ SAY+L L+  +      S++ K++   +    +  P V W  +  +++K 
Subjt:  DENNNWKEDVVRQNFLRMDTDDILNMPTGSKEAKDKIIWGVDEKGTFTVKSAYHLALDLNELLSASQSDKCKQNSFRKRKKGVHHP-VIWECNSSIKEKL

Query:  VSQGLLELDGGKLGQGRAVERSCDNAENLG----SSKQRLKKIVDTYKRRSIVVEV-ESDVLKVINILSGGSEDLTEVKFFTDKILDVAANLCAMSFRHC
        +  G++  D     +G A+   CD  +++     +    L K ++     +I   + E D   VI  +    EDL+      + I  V AN    S +  
Subjt:  VSQGLLELDGGKLGQGRAVERSCDNAENLG----SSKQRLKKIVDTYKRRSIVVEV-ESDVLKVINILSGGSEDLTEVKFFTDKILDVAANLCAMSFRHC

Query:  KRVLNTDAHSVARLAM
         R  N  AHS+A+ A+
Subjt:  KRVLNTDAHSVARLAM

TrEMBL top hitse value%identityAlignment
A0A2H5QD85 Protein FAR1-RELATED SEQUENCE7.6e-0635.63Show/hide
Query:  NNNWKEDVVRQNFLRMDTDDILNMPTGSKEAKDKIIWGVDEKGTFTVKSAYHLALDLNELLSASQSDKCKQNSFRKRKKGVHHPVIW
        N  WKE+V+ Q+F++ +   IL++P       D++IW  D+ G ++VKS Y +AL L    +AS SD  K           H  VIW
Subjt:  NNNWKEDVVRQNFLRMDTDDILNMPTGSKEAKDKIIWGVDEKGTFTVKSAYHLALDLNELLSASQSDKCKQNSFRKRKKGVHHPVIW

A0A5D3CRR9 Putative non-LTR retroelement reverse transcriptase1.2e-0633.03Show/hide
Query:  LKNHYVNHSRDENNNWKEDVVRQNFLRMDTDDILNMPTGSKEAKDKIIWGVDEKGTFTVKSAYHLALDLNELLSASQSDKCKQNSFRKRKKGVHHPVIWE
        LK   V+   +    W ED+++  F++ D + ILNMP  S+++ D I WG D KG F++KSAYH A++     S  ++   K  +   R+KG    V+  
Subjt:  LKNHYVNHSRDENNNWKEDVVRQNFLRMDTDDILNMPTGSKEAKDKIIWGVDEKGTFTVKSAYHLALDLNELLSASQSDKCKQNSFRKRKKGVHHPVIWE

Query:  CNSSIKEKL
          S  + K+
Subjt:  CNSSIKEKL

A0A5N5I633 Reverse transcriptase domain-containing protein2.6e-0646.55Show/hide
Query:  ENNNWKEDVVRQNFLRMDTDDILNMPTGSKEAKDKIIWGVDEKGTFTVKSAYHLALDL
        EN  WKE+V+ + F  ++ + I+++P   +  +DK+IW  D+KG F+VKSAYH+ALDL
Subjt:  ENNNWKEDVVRQNFLRMDTDDILNMPTGSKEAKDKIIWGVDEKGTFTVKSAYHLALDL

A0A6P9ERU0 uncharacterized protein LOC1183498534.4e-0631.96Show/hide
Query:  NNWKEDVVRQNFLRMDTDDILNMPTGSKEAKDKIIWGVDEKGTFTVKSAYHLALDLNELLSASQSDKCKQNSFRK-----RKKGVHHPVIWECNSSI
        ++W E++VR+ FL+ + + I ++P     ++DK+IWG  ++G FTVKSAY+L  +    L    S + K +S  K     R  GV    +W+  + +
Subjt:  NNWKEDVVRQNFLRMDTDDILNMPTGSKEAKDKIIWGVDEKGTFTVKSAYHLALDLNELLSASQSDKCKQNSFRK-----RKKGVHHPVIWECNSSI

B8BK40 Uncharacterized protein3.4e-0643.94Show/hide
Query:  NNNWKEDVVRQNFLRMDTDDILNMPTGSKEAKDKIIWGVDEKGTFTVKSAYHLALDLNELLSASQS
        +  W  D + Q FL +D D ILN+   +++ +D + W  D  G F+V+SAYHLAL LNE+ S+S S
Subjt:  NNNWKEDVVRQNFLRMDTDDILNMPTGSKEAKDKIIWGVDEKGTFTVKSAYHLALDLNELLSASQS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCAAGGAGCACCTCAAAAACCATTATGTAAACCACTCACGTGACGAAAACAACAATTGGAAGGAAGACGTGGTTAGACAAAACTTTTTAAGGATGGATACCGACGA
TATTCTAAATATGCCTACAGGGAGCAAAGAAGCAAAGGATAAGATTATTTGGGGTGTTGACGAGAAAGGAACATTCACGGTCAAGAGCGCTTATCACTTAGCGTTGGATC
TAAATGAGCTTCTCTCGGCCTCCCAATCAGACAAATGCAAACAAAATTCTTTCCGAAAGAGAAAAAAAGGAGTCCACCACCCAGTCATTTGGGAATGCAACTCCTCCATA
AAGGAAAAGTTGGTCAGCCAAGGACTACTGGAATTGGATGGAGGAAAACTTGGGCAAGGAAGAGCTGTCGAAAGGAGTTGTGATAATGCGGAAAATTTGGGATCATCGAA
ACAAAGATTAAAGAAGATCGTTGATACCTATAAGAGAAGATCGATTGTCGTTGAGGTCGAGTCCGACGTGCTGAAAGTAATCAACATCCTATCCGGTGGATCAGAGGACC
TCACAGAGGTGAAGTTCTTCACCGATAAAATTCTAGATGTGGCTGCTAATTTGTGTGCCATGTCTTTTCGCCACTGCAAGAGAGTTTTGAACACAGACGCGCACAGTGTT
GCGAGGCTGGCCATGGATTTCCCCTCTGGTGTTGATATCAGCGATGATTTCTGTATTTTGCAAGAGAAGGAGCATGTTTTTTGGGCTCCCTTTTTGCCTCCTTGGATTTT
CGCTCTATTAAATGAGAGTAGGTGTAAAACTGATTCTGCATTTATTTAA
mRNA sequenceShow/hide mRNA sequence
ATGATCAAGGAGCACCTCAAAAACCATTATGTAAACCACTCACGTGACGAAAACAACAATTGGAAGGAAGACGTGGTTAGACAAAACTTTTTAAGGATGGATACCGACGA
TATTCTAAATATGCCTACAGGGAGCAAAGAAGCAAAGGATAAGATTATTTGGGGTGTTGACGAGAAAGGAACATTCACGGTCAAGAGCGCTTATCACTTAGCGTTGGATC
TAAATGAGCTTCTCTCGGCCTCCCAATCAGACAAATGCAAACAAAATTCTTTCCGAAAGAGAAAAAAAGGAGTCCACCACCCAGTCATTTGGGAATGCAACTCCTCCATA
AAGGAAAAGTTGGTCAGCCAAGGACTACTGGAATTGGATGGAGGAAAACTTGGGCAAGGAAGAGCTGTCGAAAGGAGTTGTGATAATGCGGAAAATTTGGGATCATCGAA
ACAAAGATTAAAGAAGATCGTTGATACCTATAAGAGAAGATCGATTGTCGTTGAGGTCGAGTCCGACGTGCTGAAAGTAATCAACATCCTATCCGGTGGATCAGAGGACC
TCACAGAGGTGAAGTTCTTCACCGATAAAATTCTAGATGTGGCTGCTAATTTGTGTGCCATGTCTTTTCGCCACTGCAAGAGAGTTTTGAACACAGACGCGCACAGTGTT
GCGAGGCTGGCCATGGATTTCCCCTCTGGTGTTGATATCAGCGATGATTTCTGTATTTTGCAAGAGAAGGAGCATGTTTTTTGGGCTCCCTTTTTGCCTCCTTGGATTTT
CGCTCTATTAAATGAGAGTAGGTGTAAAACTGATTCTGCATTTATTTAA
Protein sequenceShow/hide protein sequence
MIKEHLKNHYVNHSRDENNNWKEDVVRQNFLRMDTDDILNMPTGSKEAKDKIIWGVDEKGTFTVKSAYHLALDLNELLSASQSDKCKQNSFRKRKKGVHHPVIWECNSSI
KEKLVSQGLLELDGGKLGQGRAVERSCDNAENLGSSKQRLKKIVDTYKRRSIVVEVESDVLKVINILSGGSEDLTEVKFFTDKILDVAANLCAMSFRHCKRVLNTDAHSV
ARLAMDFPSGVDISDDFCILQEKEHVFWAPFLPPWIFALLNESRCKTDSAFI