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Lag0022599 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0022599
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr7:34211515..34212407
RNA-Seq ExpressionLag0022599
SyntenyLag0022599
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001878 - Zinc finger, CCHC-type
IPR025836 - Zinc knuckle CX2CX4HX4C


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022149484.1 uncharacterized protein LOC111017902 [Momordica charantia]1.2e-1146.05Show/hide
Query:  PYSAAQSSPSVGPTTSEGFHLQDEDGKDSWCPVLYERLPDFCFGCGCLGHSRRECEGVGVSTTGAGEDQYGEWLRA
        P+   +    V      G  L++ DGKD WCP+ YE+LPDFC+ CG +GHS RECE      T    +QYG+WLRA
Subjt:  PYSAAQSSPSVGPTTSEGFHLQDEDGKDSWCPVLYERLPDFCFGCGCLGHSRRECEGVGVSTTGAGEDQYGEWLRA

XP_022150918.1 uncharacterized protein LOC111018954 [Momordica charantia]1.9e-0950.75Show/hide
Query:  LQDEDGKDSWCPVLYERLPDFCFGCGCLGHSRRECEGVGVSTTGAGEDQYGEWLRAGAFLGESTRQD
        +Q  DGKD WCP+ YE+LPDFC+ CG +GHS RE E      T  G  QYG WLRA         QD
Subjt:  LQDEDGKDSWCPVLYERLPDFCFGCGCLGHSRRECEGVGVSTTGAGEDQYGEWLRAGAFLGESTRQD

XP_022156711.1 uncharacterized protein LOC111023555 [Momordica charantia]4.8e-0866.67Show/hide
Query:  GFHLQDEDGKDSWCPVLYERLPDFCFGCGCLGHSRRECE
        G  ++  DGKD WCP+ YERLPDFC+GCGC+GHS RE E
Subjt:  GFHLQDEDGKDSWCPVLYERLPDFCFGCGCLGHSRRECE

XP_030936140.1 uncharacterized protein LOC115961275 [Quercus lobata]4.3e-0942.35Show/hide
Query:  EDGKDSWCPVLYERLPDFCFGCGCLGHSRRECEGVGVSTTGAGED--QYGEWLRAGAFLGESTR--QDPGQGDVHEKETGVPDSV
        EDGKD W P  YERLP+ C+ CGCL H  R CE    S    GE+  Q+G WL+A  FL   ++    PG  ++ +K   +P+ V
Subjt:  EDGKDSWCPVLYERLPDFCFGCGCLGHSRRECEGVGVSTTGAGED--QYGEWLRAGAFLGESTR--QDPGQGDVHEKETGVPDSV

XP_042944706.1 uncharacterized protein LOC122278594 [Carya illinoinensis]1.9e-0930.61Show/hide
Query:  GKDSWCPVLYERLPDFCFGCGCLGHSRRECEGVGVSTTGAGEDQYGEWLRAGAFLGESTR-QDPGQGDVHEKETGVPDSVAGRREEVSSSCVGYSAEICN
        G   W P+ YE+LP  CF CGC+ H +  C    V  T    DQ+G WLRAG  +G ST  +D  +G+    +  V D V   + E  +  V    E   
Subjt:  GKDSWCPVLYERLPDFCFGCGCLGHSRRECEGVGVSTTGAGEDQYGEWLRAGAFLGESTR-QDPGQGDVHEKETGVPDSVAGRREEVSSSCVGYSAEICN

Query:  VKGGKEGQL------EGSGKGKQKVGIGPSEPWSTYVEGEAMVVDKVELIQGREVE---NGGKSTSSKGWKRRAREILVDVTNSEAPVTLDGSKRK
        VK  +EG +      + +G+G  +V +   E  +  +        +V +++  EVE   NGG+ +    WKR+AR I      +E  V + GS+ +
Subjt:  VKGGKEGQL------EGSGKGKQKVGIGPSEPWSTYVEGEAMVVDKVELIQGREVE---NGGKSTSSKGWKRRAREILVDVTNSEAPVTLDGSKRK

TrEMBL top hitse value%identityAlignment
A0A6J1D765 uncharacterized protein LOC1110179025.9e-1246.05Show/hide
Query:  PYSAAQSSPSVGPTTSEGFHLQDEDGKDSWCPVLYERLPDFCFGCGCLGHSRRECEGVGVSTTGAGEDQYGEWLRA
        P+   +    V      G  L++ DGKD WCP+ YE+LPDFC+ CG +GHS RECE      T    +QYG+WLRA
Subjt:  PYSAAQSSPSVGPTTSEGFHLQDEDGKDSWCPVLYERLPDFCFGCGCLGHSRRECEGVGVSTTGAGEDQYGEWLRA

A0A6J1DAR4 uncharacterized protein LOC1110189549.4e-1050.75Show/hide
Query:  LQDEDGKDSWCPVLYERLPDFCFGCGCLGHSRRECEGVGVSTTGAGEDQYGEWLRAGAFLGESTRQD
        +Q  DGKD WCP+ YE+LPDFC+ CG +GHS RE E      T  G  QYG WLRA         QD
Subjt:  LQDEDGKDSWCPVLYERLPDFCFGCGCLGHSRRECEGVGVSTTGAGEDQYGEWLRAGAFLGESTRQD

A0A6J1DVS4 uncharacterized protein LOC1110235552.3e-0866.67Show/hide
Query:  GFHLQDEDGKDSWCPVLYERLPDFCFGCGCLGHSRRECE
        G  ++  DGKD WCP+ YERLPDFC+GCGC+GHS RE E
Subjt:  GFHLQDEDGKDSWCPVLYERLPDFCFGCGCLGHSRRECE

A0A6P9EQS3 uncharacterized protein LOC1183497095.7e-0731.07Show/hide
Query:  GKDSWCPVLYERLPDFCFGCGCLGHSRRECEGVGVSTTGAGEDQYGEWLRAGAFLGESTRQDPGQGDVHEKETGVPDSVAGRREEVSSSCVGYSAEICNV
        G+  W P+ YE+LP FCF CGCL H +  CE   V     G +QYG WLRA    GE  +++    ++ +   G      G   +V         ++ N+
Subjt:  GKDSWCPVLYERLPDFCFGCGCLGHSRRECEGVGVSTTGAGEDQYGEWLRAGAFLGESTRQDPGQGDVHEKETGVPDSVAGRREEVSSSCVGYSAEICNV

Query:  KGGKEGQLEGSGKGKQKVGIGPSEPWSTYV---EGEAMVVDKVELIQGREVENGGKSTSS----KGWKRRAREILVD
        + GK+G   G   G ++   G SE  S  +   E E       E+I  ++VE   K T+     KG       ILVD
Subjt:  KGGKEGQLEGSGKGKQKVGIGPSEPWSTYV---EGEAMVVDKVELIQGREVENGGKSTSS----KGWKRRAREILVD

A0A6P9F5H1 uncharacterized protein LOC1183497115.7e-0731.07Show/hide
Query:  GKDSWCPVLYERLPDFCFGCGCLGHSRRECEGVGVSTTGAGEDQYGEWLRAGAFLGESTRQDPGQGDVHEKETGVPDSVAGRREEVSSSCVGYSAEICNV
        G+  W P+ YE+LP FCF CGCL H +  CE   V     G +QYG WLRA    GE  +++    ++ +   G      G   +V         ++ N+
Subjt:  GKDSWCPVLYERLPDFCFGCGCLGHSRRECEGVGVSTTGAGEDQYGEWLRAGAFLGESTRQDPGQGDVHEKETGVPDSVAGRREEVSSSCVGYSAEICNV

Query:  KGGKEGQLEGSGKGKQKVGIGPSEPWSTYV---EGEAMVVDKVELIQGREVENGGKSTSS----KGWKRRAREILVD
        + GK+G   G   G ++   G SE  S  +   E E       E+I  ++VE   K T+     KG       ILVD
Subjt:  KGGKEGQLEGSGKGKQKVGIGPSEPWSTYV---EGEAMVVDKVELIQGREVENGGKSTSS----KGWKRRAREILVD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGCCCTATTCTGCGGCTCAGAGTTCGCCTTCGGTTGGACCGACCACTTCGGAGGGGTTTCATTTGCAGGATGAGGATGGGAAGGACTCTTGGTGCCCAGTTTTGTA
TGAGCGTCTTCCGGACTTCTGCTTTGGGTGCGGATGTTTAGGCCATTCAAGGCGGGAGTGTGAAGGTGTGGGGGTAAGTACTACAGGTGCAGGGGAGGATCAGTATGGTG
AGTGGCTGAGAGCAGGTGCTTTCCTTGGGGAGAGTACTCGGCAGGATCCAGGTCAGGGTGATGTGCATGAGAAGGAGACAGGGGTACCCGACAGCGTTGCTGGGAGGAGG
GAGGAAGTGTCCAGTTCCTGCGTTGGATACAGTGCAGAGATTTGTAATGTGAAGGGAGGGAAGGAAGGCCAGTTGGAGGGCAGTGGGAAGGGTAAGCAGAAGGTGGGGAT
TGGCCCCTCTGAACCATGGTCCACCTATGTGGAGGGGGAGGCTATGGTGGTGGATAAGGTGGAGTTGATCCAGGGTAGAGAGGTTGAGAACGGGGGCAAGAGTACCAGTA
GCAAGGGGTGGAAGAGGCGAGCGAGAGAGATTTTAGTGGATGTTACAAACTCTGAGGCTCCTGTGACGCTGGATGGGAGCAAACGGAAGGCTGGTCCGGGGTCGTTGGCC
GGACAGGGGGAAAGAAGATGA
mRNA sequenceShow/hide mRNA sequence
ATGTTGCCCTATTCTGCGGCTCAGAGTTCGCCTTCGGTTGGACCGACCACTTCGGAGGGGTTTCATTTGCAGGATGAGGATGGGAAGGACTCTTGGTGCCCAGTTTTGTA
TGAGCGTCTTCCGGACTTCTGCTTTGGGTGCGGATGTTTAGGCCATTCAAGGCGGGAGTGTGAAGGTGTGGGGGTAAGTACTACAGGTGCAGGGGAGGATCAGTATGGTG
AGTGGCTGAGAGCAGGTGCTTTCCTTGGGGAGAGTACTCGGCAGGATCCAGGTCAGGGTGATGTGCATGAGAAGGAGACAGGGGTACCCGACAGCGTTGCTGGGAGGAGG
GAGGAAGTGTCCAGTTCCTGCGTTGGATACAGTGCAGAGATTTGTAATGTGAAGGGAGGGAAGGAAGGCCAGTTGGAGGGCAGTGGGAAGGGTAAGCAGAAGGTGGGGAT
TGGCCCCTCTGAACCATGGTCCACCTATGTGGAGGGGGAGGCTATGGTGGTGGATAAGGTGGAGTTGATCCAGGGTAGAGAGGTTGAGAACGGGGGCAAGAGTACCAGTA
GCAAGGGGTGGAAGAGGCGAGCGAGAGAGATTTTAGTGGATGTTACAAACTCTGAGGCTCCTGTGACGCTGGATGGGAGCAAACGGAAGGCTGGTCCGGGGTCGTTGGCC
GGACAGGGGGAAAGAAGATGA
Protein sequenceShow/hide protein sequence
MLPYSAAQSSPSVGPTTSEGFHLQDEDGKDSWCPVLYERLPDFCFGCGCLGHSRRECEGVGVSTTGAGEDQYGEWLRAGAFLGESTRQDPGQGDVHEKETGVPDSVAGRR
EEVSSSCVGYSAEICNVKGGKEGQLEGSGKGKQKVGIGPSEPWSTYVEGEAMVVDKVELIQGREVENGGKSTSSKGWKRRAREILVDVTNSEAPVTLDGSKRKAGPGSLA
GQGERR