; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0022632 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0022632
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionTranscription elongation factor B polypeptide 3 isoform X2
Genome locationchr7:34671776..34672540
RNA-Seq ExpressionLag0022632
SyntenyLag0022632
Gene Ontology termsGO:0008152 - metabolic process (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0054521.1 transcription elongation factor B polypeptide 3 isoform X2 [Cucumis melo var. makuwa]1.3e-0939.53Show/hide
Query:  HLRKNENGRKVAMEERRGARVRRMALDLGTFAWVRDCLMVVSKAKNPLGFWRRRRLDVVIIFFQVLSNSKGRYGLVSMEPFRGWKNSIFIPEGSNLKGWA
        H R +E GRK+ +EER G R R++ L+LGT AWVRDCL+  ++  NPL FWRRR L+  ++      N  GR  L +     G   S    EGS LK   
Subjt:  HLRKNENGRKVAMEERRGARVRRMALDLGTFAWVRDCLMVVSKAKNPLGFWRRRRLDVVIIFFQVLSNSKGRYGLVSMEPFRGWKNSIFIPEGSNLKGWA

Query:  SLEASMTGLLPSVKPTIQKGKQEGRTTSK
         L+A        VK    K + EG    K
Subjt:  SLEASMTGLLPSVKPTIQKGKQEGRTTSK

TYK14183.1 hypothetical protein E5676_scaffold8046G00070 [Cucumis melo var. makuwa]1.7e-3038.16Show/hide
Query:  KVNIDWKVFHLRKNENGRKVAMEERRGARVRRMALDLGTFAWVRDCLMVVSKAKNPLGFWRRRRLDVVIIFFQVLSNSKGRYGLVSMEPFRGWKNSIFIP
        K+ ID K F +      RK+ +EER G    ++ LD GT AWVRDCL+  + A N + FW +RRL+  IIFFQVL N KGR+ ++S+E F+  K  IFIP
Subjt:  KVNIDWKVFHLRKNENGRKVAMEERRGARVRRMALDLGTFAWVRDCLMVVSKAKNPLGFWRRRRLDVVIIFFQVLSNSKGRYGLVSMEPFRGWKNSIFIP

Query:  EGSNLKGWASLEASMTGLLPSVKPTIQKGKQEGRTTSKTESKVNTSKSFVEAVKEGPSRIDEEEVTLSEDVKFPFYFTEVVIVERTSINSSWGEIREACL
        EGS   GW SL   ++ LLP            G    KT S    +K+  EA K     +        +DV+F F +   VI+++   +S WG +++   
Subjt:  EGSNLKGWASLEASMTGLLPSVKPTIQKGKQEGRTTSKTESKVNTSKSFVEAVKEGPSRIDEEEVTLSEDVKFPFYFTEVVIVERTSINSSWGEIREACL

Query:  RLVNIGLSLKPLCANMAVGLCGSDKDSK
        +   I  + K  CAN+AVG+ GSD ++K
Subjt:  RLVNIGLSLKPLCANMAVGLCGSDKDSK

TrEMBL top hitse value%identityAlignment
A0A0A0KB99 Uncharacterized protein2.7e-1347.37Show/hide
Query:  MALDLGTFAWVRDCLMVVSKAKNPLGFWRRRRLDVVIIFFQVLSNSKGRYGLVSMEPFRGWKNSIFIPEGSNLKGWASLEASMTGLLPSVKPTIQ
        M LD GT A VRDCL   + A NP  FW RR L   IIFFQVL N++GR+ ++S+E F+G K  IFI +GS  KG  S    ++ LL  ++  I+
Subjt:  MALDLGTFAWVRDCLMVVSKAKNPLGFWRRRRLDVVIIFFQVLSNSKGRYGLVSMEPFRGWKNSIFIPEGSNLKGWASLEASMTGLLPSVKPTIQ

A0A0A0KGZ5 Uncharacterized protein1.3e-0742.7Show/hide
Query:  KVFHLRKN-ENGRKVAMEERRGARVRRMALDLGTFAWVRDCLMVVSKAKNPLGFWRRRRLDVVIIFFQVLSNSKGRYGLVSMEPFRGWK
        K  +L++N + GRK+ +EE  G R  ++ L+LG  AWV DCL+  ++  NPLGFW RR L+   IFFQ  ++ +GR G  S    + WK
Subjt:  KVFHLRKN-ENGRKVAMEERRGARVRRMALDLGTFAWVRDCLMVVSKAKNPLGFWRRRRLDVVIIFFQVLSNSKGRYGLVSMEPFRGWK

A0A0A0LY03 Uncharacterized protein4.9e-1536.17Show/hide
Query:  NGRKVAMEERRGARVRRMALDLGTFAWVRDCLMVVSKAKNPLGFWRRRRLDVVIIFFQVLSNSKGRYGLVSMEPFRGWKNSIFIPEGSNLKGWASLEASM
        + RK+ +EER G +  ++ LDLGT  WV D L   + A   +G W+R++LD  IIFFQVL N   R+ ++S++ F+G K  +FI EGS   GW SL   +
Subjt:  NGRKVAMEERRGARVRRMALDLGTFAWVRDCLMVVSKAKNPLGFWRRRRLDVVIIFFQVLSNSKGRYGLVSMEPFRGWKNSIFIPEGSNLKGWASLEASM

Query:  TGLLPSVKPTIQKGKQEGRTTSKTESKVNTSKSFVEAVKEG
          +       +  G   G  T K+ +++   K      KEG
Subjt:  TGLLPSVKPTIQKGKQEGRTTSKTESKVNTSKSFVEAVKEG

A0A5A7ULV4 Transcription elongation factor B polypeptide 3 isoform X26.2e-1039.53Show/hide
Query:  HLRKNENGRKVAMEERRGARVRRMALDLGTFAWVRDCLMVVSKAKNPLGFWRRRRLDVVIIFFQVLSNSKGRYGLVSMEPFRGWKNSIFIPEGSNLKGWA
        H R +E GRK+ +EER G R R++ L+LGT AWVRDCL+  ++  NPL FWRRR L+  ++      N  GR  L +     G   S    EGS LK   
Subjt:  HLRKNENGRKVAMEERRGARVRRMALDLGTFAWVRDCLMVVSKAKNPLGFWRRRRLDVVIIFFQVLSNSKGRYGLVSMEPFRGWKNSIFIPEGSNLKGWA

Query:  SLEASMTGLLPSVKPTIQKGKQEGRTTSK
         L+A        VK    K + EG    K
Subjt:  SLEASMTGLLPSVKPTIQKGKQEGRTTSK

A0A5D3CQQ0 Uncharacterized protein8.3e-3138.16Show/hide
Query:  KVNIDWKVFHLRKNENGRKVAMEERRGARVRRMALDLGTFAWVRDCLMVVSKAKNPLGFWRRRRLDVVIIFFQVLSNSKGRYGLVSMEPFRGWKNSIFIP
        K+ ID K F +      RK+ +EER G    ++ LD GT AWVRDCL+  + A N + FW +RRL+  IIFFQVL N KGR+ ++S+E F+  K  IFIP
Subjt:  KVNIDWKVFHLRKNENGRKVAMEERRGARVRRMALDLGTFAWVRDCLMVVSKAKNPLGFWRRRRLDVVIIFFQVLSNSKGRYGLVSMEPFRGWKNSIFIP

Query:  EGSNLKGWASLEASMTGLLPSVKPTIQKGKQEGRTTSKTESKVNTSKSFVEAVKEGPSRIDEEEVTLSEDVKFPFYFTEVVIVERTSINSSWGEIREACL
        EGS   GW SL   ++ LLP            G    KT S    +K+  EA K     +        +DV+F F +   VI+++   +S WG +++   
Subjt:  EGSNLKGWASLEASMTGLLPSVKPTIQKGKQEGRTTSKTESKVNTSKSFVEAVKEGPSRIDEEEVTLSEDVKFPFYFTEVVIVERTSINSSWGEIREACL

Query:  RLVNIGLSLKPLCANMAVGLCGSDKDSK
        +   I  + K  CAN+AVG+ GSD ++K
Subjt:  RLVNIGLSLKPLCANMAVGLCGSDKDSK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACCGTCCAAGGAAGGTGAACATCGATTGGAAGGTGTTTCACCTTCGAAAGAATGAGAATGGGAGGAAAGTGGCGATGGAGGAACGGAGGGGAGCGAGAGTGAGGCG
AATGGCTCTAGATTTGGGGACGTTCGCTTGGGTTAGGGATTGCCTTATGGTTGTTTCGAAGGCAAAAAACCCGCTGGGATTTTGGAGAAGGAGAAGACTGGATGTTGTAA
TTATTTTCTTTCAGGTTCTGAGTAATTCGAAAGGAAGATATGGCCTGGTATCCATGGAACCCTTTCGCGGGTGGAAGAACTCGATTTTCATACCAGAAGGCTCTAATTTG
AAGGGATGGGCTTCTTTGGAAGCTTCTATGACGGGTCTTCTTCCCTCCGTGAAGCCAACAATTCAGAAAGGAAAACAAGAAGGAAGGACCACAAGTAAAACAGAAAGCAA
GGTCAACACCTCAAAATCGTTTGTAGAAGCAGTTAAGGAGGGCCCGAGTCGAATAGATGAAGAGGAAGTGACACTCTCGGAAGACGTCAAATTTCCTTTTTATTTCACGG
AGGTTGTGATCGTAGAGAGGACATCGATTAATTCTAGTTGGGGAGAAATCAGAGAAGCGTGCTTAAGGTTAGTTAATATTGGTCTATCTCTAAAACCTTTATGTGCTAAC
ATGGCAGTGGGTCTTTGTGGAAGCGATAAGGATTCTAAAGTCTTAGATTCGGGCGGGCTCTTCTTCGAACTCCGAGCATTTTTCAATCCACGAATGGGATTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGACCGTCCAAGGAAGGTGAACATCGATTGGAAGGTGTTTCACCTTCGAAAGAATGAGAATGGGAGGAAAGTGGCGATGGAGGAACGGAGGGGAGCGAGAGTGAGGCG
AATGGCTCTAGATTTGGGGACGTTCGCTTGGGTTAGGGATTGCCTTATGGTTGTTTCGAAGGCAAAAAACCCGCTGGGATTTTGGAGAAGGAGAAGACTGGATGTTGTAA
TTATTTTCTTTCAGGTTCTGAGTAATTCGAAAGGAAGATATGGCCTGGTATCCATGGAACCCTTTCGCGGGTGGAAGAACTCGATTTTCATACCAGAAGGCTCTAATTTG
AAGGGATGGGCTTCTTTGGAAGCTTCTATGACGGGTCTTCTTCCCTCCGTGAAGCCAACAATTCAGAAAGGAAAACAAGAAGGAAGGACCACAAGTAAAACAGAAAGCAA
GGTCAACACCTCAAAATCGTTTGTAGAAGCAGTTAAGGAGGGCCCGAGTCGAATAGATGAAGAGGAAGTGACACTCTCGGAAGACGTCAAATTTCCTTTTTATTTCACGG
AGGTTGTGATCGTAGAGAGGACATCGATTAATTCTAGTTGGGGAGAAATCAGAGAAGCGTGCTTAAGGTTAGTTAATATTGGTCTATCTCTAAAACCTTTATGTGCTAAC
ATGGCAGTGGGTCTTTGTGGAAGCGATAAGGATTCTAAAGTCTTAGATTCGGGCGGGCTCTTCTTCGAACTCCGAGCATTTTTCAATCCACGAATGGGATTTTAA
Protein sequenceShow/hide protein sequence
MDRPRKVNIDWKVFHLRKNENGRKVAMEERRGARVRRMALDLGTFAWVRDCLMVVSKAKNPLGFWRRRRLDVVIIFFQVLSNSKGRYGLVSMEPFRGWKNSIFIPEGSNL
KGWASLEASMTGLLPSVKPTIQKGKQEGRTTSKTESKVNTSKSFVEAVKEGPSRIDEEEVTLSEDVKFPFYFTEVVIVERTSINSSWGEIREACLRLVNIGLSLKPLCAN
MAVGLCGSDKDSKVLDSGGLFFELRAFFNPRMGF