; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0022635 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0022635
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRibonuclease H-like superfamily protein
Genome locationchr7:34749093..34750019
RNA-Seq ExpressionLag0022635
SyntenyLag0022635
Gene Ontology termsNA
InterPro domainsIPR026960 - Reverse transcriptase zinc-binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022158377.1 uncharacterized protein LOC111024874 [Momordica charantia]1.3e-5639.8Show/hide
Query:  GRDLLIKGVRFRLGNGEDISMFRDPWIPKISTFKPIRLNGEVSDGKISEFITPSGSWDLAKLKNSVSSVDYEIIRGLPINK-SLKDKLVWHYDKTGSYTV
        GRDLL+KG+R R+GNG  I  F DPW+P+ +TFKP+R N    D  ++ FIT  G+WD+  + +S  + D ++I  +PI+  +L+D  +WHYDK G+Y+V
Subjt:  GRDLLIKGVRFRLGNGEDISMFRDPWIPKISTFKPIRLNGEVSDGKISEFITPSGSWDLAKLKNSVSSVDYEIIRGLPINK-SLKDKLVWHYDKTGSYTV

Query:  KSGYKVFMMNKIDGISSSSSSISRIWNNLRKLNVPNKIKHFLWKALNNVLPNKLNLLNRNIDISPSCPMCNCYIENTDPCFFGCDRATEIWRLTFD-KVF
        +SGYK++M  K +  S+S++     WN++ KL VP KIK F+W++ +  +P   NLL R I   P+C +C    E+    FF C RA +IWR  F     
Subjt:  KSGYKVFMMNKIDGISSSSSSISRIWNNLRKLNVPNKIKHFLWKALNNVLPNKLNLLNRNIDISPSCPMCNCYIENTDPCFFGCDRATEIWRLTFD-KVF

Query:  LEDDFGGSFLDRWWKIDASSSLSDLSLVATTCWAIWNDRNSVVHGKGIPDIFSKSQWIVSYLEKFHHATARPSQSRASTTSARTGVKRSNGNPSASVAL
        L  +   SFL+ W  +       DL+L A T W IWNDRNS++HGK +  +  K +W+  +L+   H+ A+ S     T S    V +    PS+SV+L
Subjt:  LEDDFGGSFLDRWWKIDASSSLSDLSLVATTCWAIWNDRNSVVHGKGIPDIFSKSQWIVSYLEKFHHATARPSQSRASTTSARTGVKRSNGNPSASVAL

XP_030479077.1 uncharacterized protein LOC115696311 [Cannabis sativa]1.0e-3732.6Show/hide
Query:  GRDLLIKGVRFRLGNGEDISMFRDPWIPKISTFKPIRLNGEVSDGKISEFITPSGSWDLAKLKNSVSSVDYEIIRGLPIN-KSLKDKLVWHYDKTGSYTV
        GRDLLIKG+R+++GNG  +    DPW+P  ++F+P    G+V D  I  +IT    WDL  L+     +D + I  L I+  S +D+L+WH+   GSYTV
Subjt:  GRDLLIKGVRFRLGNGEDISMFRDPWIPKISTFKPIRLNGEVSDGKISEFITPSGSWDLAKLKNSVSSVDYEIIRGLPIN-KSLKDKLVWHYDKTGSYTV

Query:  KSGYKVFMMNKIDGISSSSSSISR--IWNNLRKLNVPNKIKHFLWKALNNVLPNKLNLLNRNIDISPSCPMCNCYIENTDPCFFGCDRATEIWRLTFDKV
        KSGY + +  ++D I+ SS+S      WN L  L +P K+K F W+ +N+ LP ++NL++R I +  SC +CNC  E++    F C RA ++W L    V
Subjt:  KSGYKVFMMNKIDGISSSSSSISR--IWNNLRKLNVPNKIKHFLWKALNNVLPNKLNLLNRNIDISPSCPMCNCYIENTDPCFFGCDRATEIWRLTFDKV

Query:  FLEDDFGGSFLDRWWKIDASSSLSD------LSLVATTCWAIWNDRNSVVHGKGIPDIFSKSQWIVSYLEKFHHATARPSQSRAS----TTSARTGVKRS
        F  +      + R    +  SS++       L+ +    W IW +RN  +HG           ++  Y+++F  A A+     +S      +  T  + S
Subjt:  FLEDDFGGSFLDRWWKIDASSSLSD------LSLVATTCWAIWNDRNSVVHGKGIPDIFSKSQWIVSYLEKFHHATARPSQSRAS----TTSARTGVKRS

Query:  NGNPSASVALHATSSHSVH
        +   S+  AL  T S+ ++
Subjt:  NGNPSASVALHATSSHSVH

XP_030496634.1 uncharacterized protein LOC115712492 [Cannabis sativa]2.7e-3833.44Show/hide
Query:  GRDLLIKGVRFRLGNGEDISMFRDPWIPKISTFKPIRLNGEVSDGKISEFITPSGSWDLAKLKNSVSSVDYEIIRGLPIN-KSLKDKLVWHYDKTGSYTV
        GR+LLI+G+R+++GNG  +S   D WIP  + FKP+  NG      +S FIT    W+++ L     S+D + I  +P++     D+L+WH+  TG YTV
Subjt:  GRDLLIKGVRFRLGNGEDISMFRDPWIPKISTFKPIRLNGEVSDGKISEFITPSGSWDLAKLKNSVSSVDYEIIRGLPIN-KSLKDKLVWHYDKTGSYTV

Query:  KSGYKVFMMNKIDGISSSSSSISRIWNNLRKLNVPNKIKHFLWKALNNVLPNKLNLLNRNIDISPSCPMCNCYIENTDPCFFGCDRATEIWR---LTFDK
         SG+ +      +  + +SSS S  W     L +P+K+K F W+ + N LP    L+ R +  S +C +CN   E+     F C  A ++WR    T D 
Subjt:  KSGYKVFMMNKIDGISSSSSSISRIWNNLRKLNVPNKIKHFLWKALNNVLPNKLNLLNRNIDISPSCPMCNCYIENTDPCFFGCDRATEIWR---LTFDK

Query:  VFLEDDFGGSFLDRWWKIDASSSLSDLSLVATTCWAIWNDRNSVVHG---KGIPDIFS-KSQWIVSY-------LEKFHHATARPSQSRAST--TSARTG
            + + G +L     + +  S  DL L+  T WAIW++RN V+HG   K   DI S  S  +  Y        ++F+H  A  S S +++   SA T 
Subjt:  VFLEDDFGGSFLDRWWKIDASSSLSDLSLVATTCWAIWNDRNSVVHG---KGIPDIFS-KSQWIVSY-------LEKFHHATARPSQSRAST--TSARTG

Query:  VKRSNGNPSAS
         +RSN + S S
Subjt:  VKRSNGNPSAS

XP_030508852.1 uncharacterized protein LOC115723496 [Cannabis sativa]1.2e-3831.93Show/hide
Query:  GRDLLIKGVRFRLGNGEDISMFRDPWIPKISTFKPIRLNGEVSDGKISEFITPSGSWDLAKLKNSVSSVDYEIIRGLPINK-SLKDKLVWHYDKTGSYTV
        G++LL+KG+R+R+G+GE I+   D W+P  +TFKP    G   +  +++ IT   +WD+  L+ + +  D   +  +P++     D L+W+   TG Y V
Subjt:  GRDLLIKGVRFRLGNGEDISMFRDPWIPKISTFKPIRLNGEVSDGKISEFITPSGSWDLAKLKNSVSSVDYEIIRGLPINK-SLKDKLVWHYDKTGSYTV

Query:  KSGYKVFMMNKIDGISSSSSSISRIWNNLRKLNVPNKIKHFLWKALNNVLPNKLNLLNRNIDISPSCPMCNCYIENTDPCFFGCDRATEIWRLTFDKVFL
        KSGY   +       S+ S+SI   W+N  KL +P K++ F+WK  +  LP    L  R+I  SP C +CN   E      F C RA  +W L+   +  
Subjt:  KSGYKVFMMNKIDGISSSSSSISRIWNNLRKLNVPNKIKHFLWKALNNVLPNKLNLLNRNIDISPSCPMCNCYIENTDPCFFGCDRATEIWRLTFDKVFL

Query:  EDDFGGSFLDRWWKIDASSSLSDLSLVATTCWAIWNDRNSVVHGKGIPDIFSKSQWIVSYLEKFHHA---TARPSQSRASTTSAR
        +     S  D    +  S S S+L L    CW+IW++RN++ HG  +    + + +  SYL +F  A    A+P  +  + T +R
Subjt:  EDDFGGSFLDRWWKIDASSSLSDLSLVATTCWAIWNDRNSVVHGKGIPDIFSKSQWIVSYLEKFHHA---TARPSQSRASTTSAR

XP_030509050.1 uncharacterized protein LOC115723712 [Cannabis sativa]2.9e-4032.25Show/hide
Query:  GRDLLIKGVRFRLGNGEDISMFRDPWIPKISTFKPIRLNGEVSDGKISEFITPSGSWDLAKLKNSVSSVDYEIIRGLPINK-SLKDKLVWHYDKTGSYTV
        G++LL+KG+R+R+G+G D++    PWIP  S FKP+       D K+++FIT S  WD+ KL+   +  D + I  +P++    +D L+WHY   G YTV
Subjt:  GRDLLIKGVRFRLGNGEDISMFRDPWIPKISTFKPIRLNGEVSDGKISEFITPSGSWDLAKLKNSVSSVDYEIIRGLPINK-SLKDKLVWHYDKTGSYTV

Query:  KSGYKVFMMNKIDGISSSSSSISRIWNNLRKLNVPNKIKHFLWKALNNVLPNKLNLLNRNIDISPSCPMCNCYIENTDPCFFGCDRATEIWRLTFDKVFL
        KSGYK+   +  D   +SS +    W     L +P+KI+ F W+A +  LP    L  R+I  SP CP+C  ++E  +  FF C+RA ++W+   + +  
Subjt:  KSGYKVFMMNKIDGISSSSSSISRIWNNLRKLNVPNKIKHFLWKALNNVLPNKLNLLNRNIDISPSCPMCNCYIENTDPCFFGCDRATEIWRLTFDKVFL

Query:  EDDFGGSFLDRWWKIDASSSLSDLSLVATTCWAIWNDRNSVVHGKGIPDIFSKSQWIVSYLEKFHHATARPSQSRASTTSARTGVKRSNGNPSASVALHA
              SF D    + +      + L  TT W IW  RN+  H K         Q+  SYL +F  A A+ + +      +      S    SA ++   
Subjt:  EDDFGGSFLDRWWKIDASSSLSDLSLVATTCWAIWNDRNSVVHGKGIPDIFSKSQWIVSYLEKFHHATARPSQSRASTTSARTGVKRSNGNPSASVALHA

Query:  TSSHSVH
         +S S H
Subjt:  TSSHSVH

TrEMBL top hitse value%identityAlignment
A0A6J1DX30 uncharacterized protein LOC1110248746.2e-5739.8Show/hide
Query:  GRDLLIKGVRFRLGNGEDISMFRDPWIPKISTFKPIRLNGEVSDGKISEFITPSGSWDLAKLKNSVSSVDYEIIRGLPINK-SLKDKLVWHYDKTGSYTV
        GRDLL+KG+R R+GNG  I  F DPW+P+ +TFKP+R N    D  ++ FIT  G+WD+  + +S  + D ++I  +PI+  +L+D  +WHYDK G+Y+V
Subjt:  GRDLLIKGVRFRLGNGEDISMFRDPWIPKISTFKPIRLNGEVSDGKISEFITPSGSWDLAKLKNSVSSVDYEIIRGLPINK-SLKDKLVWHYDKTGSYTV

Query:  KSGYKVFMMNKIDGISSSSSSISRIWNNLRKLNVPNKIKHFLWKALNNVLPNKLNLLNRNIDISPSCPMCNCYIENTDPCFFGCDRATEIWRLTFD-KVF
        +SGYK++M  K +  S+S++     WN++ KL VP KIK F+W++ +  +P   NLL R I   P+C +C    E+    FF C RA +IWR  F     
Subjt:  KSGYKVFMMNKIDGISSSSSSISRIWNNLRKLNVPNKIKHFLWKALNNVLPNKLNLLNRNIDISPSCPMCNCYIENTDPCFFGCDRATEIWRLTFD-KVF

Query:  LEDDFGGSFLDRWWKIDASSSLSDLSLVATTCWAIWNDRNSVVHGKGIPDIFSKSQWIVSYLEKFHHATARPSQSRASTTSARTGVKRSNGNPSASVAL
        L  +   SFL+ W  +       DL+L A T W IWNDRNS++HGK +  +  K +W+  +L+   H+ A+ S     T S    V +    PS+SV+L
Subjt:  LEDDFGGSFLDRWWKIDASSSLSDLSLVATTCWAIWNDRNSVVHGKGIPDIFSKSQWIVSYLEKFHHATARPSQSRASTTSARTGVKRSNGNPSASVAL

A0A803NQ77 Uncharacterized protein2.9e-3831.31Show/hide
Query:  GRDLLIKGVRFRLGNGEDISMFRDPWIPKISTFKPIRLNGEVSDGKISEFITPSGSWDLAKLKNSVSSVDYEIIRGLPINK-SLKDKLVWHYDKTGSYTV
        GRDLL+KG+R+++G+G ++    DPW+P  +T  P    G+ S   +  +I+   +WDL  L+     +D + I  +P++    +DKL+W +  TG Y+V
Subjt:  GRDLLIKGVRFRLGNGEDISMFRDPWIPKISTFKPIRLNGEVSDGKISEFITPSGSWDLAKLKNSVSSVDYEIIRGLPINK-SLKDKLVWHYDKTGSYTV

Query:  KSGYKVFMMNKIDGISSSSSSISRIWNNLRKLNVPNKIKHFLWKALNNVLPNKLNLLNRNIDISPSCPMCNCYIENTDPCFFGCDRATEIWRLTFDKVFL
        KSGY++    +     SSSS+  + WN +  L +P K+K FLW+ +N  LP  +NL +R I  S +C +C C    +    F C RA  +W+    K+++
Subjt:  KSGYKVFMMNKIDGISSSSSSISRIWNNLRKLNVPNKIKHFLWKALNNVLPNKLNLLNRNIDISPSCPMCNCYIENTDPCFFGCDRATEIWRLTFDKVFL

Query:  EDDFGGSFLDRWWKIDASSSLSDLSLVATTCWAIWNDRNSVVHGKGIPDIFSKSQWIVSYLEKFHHATARPSQSRASTTSARTGVKRSNGNPSASVA
         +       D +  I A+ +  +L  +    W IW++RN   HG     +     +  SYL++FH AT+  S+  A+  S++  +      P+AS A
Subjt:  EDDFGGSFLDRWWKIDASSSLSDLSLVATTCWAIWNDRNSVVHGKGIPDIFSKSQWIVSYLEKFHHATARPSQSRASTTSARTGVKRSNGNPSASVA

A0A803P5H2 Uncharacterized protein2.9e-3834.46Show/hide
Query:  GRDLLIKGVRFRLGNGEDISMFRDPWIPKISTFKPIRLNGEVSDGKISEFITPSGSWDLAKLKNSVSSVDYEIIRGLPIN-KSLKDKLVWHYDKTGSYTV
        GR+LL KG+  ++G+G  ++  +D WIP+   FKP+R  G  S+  ++++IT +  WDL  L N  S  D + I  +P++  S +D+  WHYD +G YTV
Subjt:  GRDLLIKGVRFRLGNGEDISMFRDPWIPKISTFKPIRLNGEVSDGKISEFITPSGSWDLAKLKNSVSSVDYEIIRGLPIN-KSLKDKLVWHYDKTGSYTV

Query:  KSGYKVFMMNKIDGISSSSSSISRIWNNLRKLNVPNKIKHFLWKALNNVLPNKLNLLNRNIDISPSCPMCNCYIENTDPCFFGCDRATEIWRLTFDKVFL
        KSGY +    +    SSSS+S    W     LN+P+K++ F W+ +N+ LP   NL +R +  S +C +C+   E+     F C  A  +W+ T     L
Subjt:  KSGYKVFMMNKIDGISSSSSSISRIWNNLRKLNVPNKIKHFLWKALNNVLPNKLNLLNRNIDISPSCPMCNCYIENTDPCFFGCDRATEIWRLTFDKVFL

Query:  EDDFGGSFLDRWWKIDASSSL--SDLSLVATTCWAIWNDRNSVVHGKGIPDIFSKSQWIVSYLEKFH
        +    G   D  + +  S+ L  S+L  +  T W IW+DRN+ +HGK +    + S    +YL  FH
Subjt:  EDDFGGSFLDRWWKIDASSSL--SDLSLVATTCWAIWNDRNSVVHGKGIPDIFSKSQWIVSYLEKFH

A0A803Q0L2 Uncharacterized protein2.9e-3831.88Show/hide
Query:  GRDLLIKGVRFRLGNGEDISMFRDPWIPKISTFKPIRLNGEVSDGKISEFITPSGSWDLAKLKNSVSSVDYEIIRGLPINK-SLKDKLVWHYDKTGSYTV
        G+DLL+KG+R+++G G+ +    DPW+P  +TF P    G+ +   +  +I+P  +WDL  LK+    +D + I  LP++    +DKL+WH+  TG YTV
Subjt:  GRDLLIKGVRFRLGNGEDISMFRDPWIPKISTFKPIRLNGEVSDGKISEFITPSGSWDLAKLKNSVSSVDYEIIRGLPINK-SLKDKLVWHYDKTGSYTV

Query:  KSGYKVFMMNKIDGISSSSSSISRIWNNLRKLNVPNKIKHFLWKALNNVLPNKLNLLNRNIDISPSCPMCNCYIENTDPCFFGCDRATEIWRLTFDKVFL
        K+GY +    +     SSSS+  + WN +  L +P K+K F W+ +N  LP  +NL +R I  + +C +C C  E +    F C RA  +W+    ++ +
Subjt:  KSGYKVFMMNKIDGISSSSSSISRIWNNLRKLNVPNKIKHFLWKALNNVLPNKLNLLNRNIDISPSCPMCNCYIENTDPCFFGCDRATEIWRLTFDKVFL

Query:  EDDFGGSFLDRWWKIDASSSLSDLSLVATTCWAIWNDRNSVVHG---KGIPDIFSKSQWIVSYLEKFHHATARPSQSRASTTSARTGVKRSNGNPSAS
         +    +  D +  I A+ +  +L  +    W+IW++RN   HG   K +  + + S   V+YL +F  ATA    +     ++  G   SN  PSA+
Subjt:  EDDFGGSFLDRWWKIDASSSLSDLSLVATTCWAIWNDRNSVVHG---KGIPDIFSKSQWIVSYLEKFHHATARPSQSRASTTSARTGVKRSNGNPSAS

A0A803Q6Z2 Uncharacterized protein1.4e-4032.25Show/hide
Query:  GRDLLIKGVRFRLGNGEDISMFRDPWIPKISTFKPIRLNGEVSDGKISEFITPSGSWDLAKLKNSVSSVDYEIIRGLPINK-SLKDKLVWHYDKTGSYTV
        G++LL+KG+R+R+G+G D++    PWIP  S FKP+       D K+++FIT S  WD+ KL+   +  D + I  +P++    +D L+WHY   G YTV
Subjt:  GRDLLIKGVRFRLGNGEDISMFRDPWIPKISTFKPIRLNGEVSDGKISEFITPSGSWDLAKLKNSVSSVDYEIIRGLPINK-SLKDKLVWHYDKTGSYTV

Query:  KSGYKVFMMNKIDGISSSSSSISRIWNNLRKLNVPNKIKHFLWKALNNVLPNKLNLLNRNIDISPSCPMCNCYIENTDPCFFGCDRATEIWRLTFDKVFL
        KSGYK+   +  D   +SS +    W     L +P+KI+ F W+A +  LP    L  R+I  SP CP+C  ++E  +  FF C+RA ++W+   + +  
Subjt:  KSGYKVFMMNKIDGISSSSSSISRIWNNLRKLNVPNKIKHFLWKALNNVLPNKLNLLNRNIDISPSCPMCNCYIENTDPCFFGCDRATEIWRLTFDKVFL

Query:  EDDFGGSFLDRWWKIDASSSLSDLSLVATTCWAIWNDRNSVVHGKGIPDIFSKSQWIVSYLEKFHHATARPSQSRASTTSARTGVKRSNGNPSASVALHA
              SF D    + +      + L  TT W IW  RN+  H K         Q+  SYL +F  A A+ + +      +      S    SA ++   
Subjt:  EDDFGGSFLDRWWKIDASSSLSDLSLVATTCWAIWNDRNSVVHGKGIPDIFSKSQWIVSYLEKFHHATARPSQSRASTTSARTGVKRSNGNPSASVALHA

Query:  TSSHSVH
         +S S H
Subjt:  TSSHSVH

SwissProt top hitse value%identityAlignment
P0C2F6 Putative ribonuclease H protein At1g657503.6e-0922.5Show/hide
Query:  RDLLIKGVRFRLGNGEDISMFRDPWIPKISTFKPIRLNGEVSDGK---------ISEFITPSGSWDLAKLKNSVSSVDYEIIRG--LPINKSLKDKLVWH
        RD++  GV +  G+G+ I  + D W+    + KP+    E+ +G+           +   P   WD AK+    ++     +R   L +    +D+L W 
Subjt:  RDLLIKGVRFRLGNGEDISMFRDPWIPKISTFKPIRLNGEVSDGK---------ISEFITPSGSWDLAKLKNSVSSVDYEIIRG--LPINKSLKDKLVWH

Query:  YDKTGSYTVKSGYKVFMMNKIDGISSSSSSISRIWNNLRKLNVPNKIKHFLWKALNNVLPNKLNLLNRNIDISPSCPMCNCYIENTDPCFFGCDRATEIW
        + + G ++V+S Y++  ++++        +++  +N L K+ VP ++K FLW   N  +  +     R++  S  C +C   +E+       C     IW
Subjt:  YDKTGSYTVKSGYKVFMMNKIDGISSSSSSISRIWNNLRKLNVPNKIKHFLWKALNNVLPNKLNLLNRNIDISPSCPMCNCYIENTDPCFFGCDRATEIW

Arabidopsis top hitse value%identityAlignment
AT1G60720.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein2.2e-0621.8Show/hide
Query:  RDLLIKGVRFRLGNGEDISMFRDPWIPKISTFKPIRLNGEVS-----DGKISEFITPSGSWDLAKLKNSVSSVDYEIIRGL--PINKSLKDKLVWHYDKT
        R L  + V+  LGNG     + D W       K +   G  S     + ++ E +  +G W L   +++ +   ++ I  +  P   +++D   W     
Subjt:  RDLLIKGVRFRLGNGEDISMFRDPWIPKISTFKPIRLNGEVS-----DGKISEFITPSGSWDLAKLKNSVSSVDYEIIRGL--PINKSLKDKLVWHYDKT

Query:  GSYTVKSGYKVFMMNKIDGISSSSSSISRIWNNLR--------------KLNVPNKIKHFLWKALNNVLPNKLNLLNRNIDISPSCPMCNCYIENTDPCF
                        + G+     S +R W+ +R              K  VP K    +W +  + LP +  L +     S  C +C    E+ D   
Subjt:  GSYTVKSGYKVFMMNKIDGISSSSSSISRIWNNLR--------------KLNVPNKIKHFLWKALNNVLPNKLNLLNRNIDISPSCPMCNCYIENTDPCF

Query:  FGCDRATEIWRLTFDKVFLEDDFGGSFLD--RWWKIDASSSLSDLSLVA--TTCWAIWNDRNSVVH
        F C+ A ++WRL F ++        S+ +   W +  +SS+ S L  V+     + IW  RN+V+H
Subjt:  FGCDRATEIWRLTFDKVFLEDDFGGSFLD--RWWKIDASSSLSDLSLVA--TTCWAIWNDRNSVVH

AT2G22440.1 BEST Arabidopsis thaliana protein match is: Ribonuclease H-like superfamily protein (TAIR:AT4G29090.1)2.2e-0635.96Show/hide
Query:  MFRDPWIPKISTFKPIR--LNGEVSDGKISEFITPSGS-WDLAKLKNSVSSVDYEIIRGL-PINKSLKDKLVWHYDKTGSYTVKSGYKV
        +++DPWIP I   +P +  LN   S   +++ I  + + W L +L+  +  VD  +I G+ P    L D   W + K+G+YTVKSGY V
Subjt:  MFRDPWIPKISTFKPIR--LNGEVSDGKISEFITPSGS-WDLAKLKNSVSSVDYEIIRGL-PINKSLKDKLVWHYDKTGSYTVKSGYKV

AT3G09510.1 Ribonuclease H-like superfamily protein4.3e-2631.42Show/hide
Query:  MSGRDLLIKGVRFRLGNGEDISMFRDPWIPKISTFKPIRLNGEVSDGKISEFITPSGS---WDLAKLKNSVSSVDYEIIRGLPINKSLK-DKLVWHYDKT
        + G  LL KG R  +G+G++I +  D  +      +P+       +  I+      GS   WD +K+   V   D+  I  + + KS K DK++W+Y+ T
Subjt:  MSGRDLLIKGVRFRLGNGEDISMFRDPWIPKISTFKPIRLNGEVSDGKISEFITPSGS---WDLAKLKNSVSSVDYEIIRGLPINKSLK-DKLVWHYDKT

Query:  GSYTVKSGYKVFM---MNKIDGISSSSSSI---SRIWNNLRKLNVPNKIKHFLWKALNNVLPNKLNLLNRNIDISPSCPMCNCYIENTDPCFFGCDRATE
        G YTV+SGY +        I  I+    SI   +RIWN    L +  K+KHFLW+AL+  L     L  R + I PSCP C+   E+ +   F C  AT 
Subjt:  GSYTVKSGYKVFM---MNKIDGISSSSSSI---SRIWNNLRKLNVPNKIKHFLWKALNNVLPNKLNLLNRNIDISPSCPMCNCYIENTDPCFFGCDRATE

Query:  IWRLTFDKVFLEDDFGGSFLDRWWKI-----DASSSLSDLSLVATTCWAIWNDRNSVVHGK
         WRL+   +         F +    I     D + S     L     W IW  RN+VV  K
Subjt:  IWRLTFDKVFLEDDFGGSFLDRWWKI-----DASSSLSDLSLVATTCWAIWNDRNSVVHGK

AT4G10613.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein3.2e-0528.97Show/hide
Query:  LWKALNNVLPNKLNLLNRNIDISPSCPMCNCYIENTDPCFFGCDRATEIWRLTFDKVFLED-DFG-GSFLDRWWKIDASSS---LSDLSLVATTCWAIWN
        +W +  + LP +  L++  + ISP C +C+  +E  D     C  ++ IW +   ++ L+   F     L  W K+  +SS   +  L   AT C AIW 
Subjt:  LWKALNNVLPNKLNLLNRNIDISPSCPMCNCYIENTDPCFFGCDRATEIWRLTFDKVFLED-DFG-GSFLDRWWKIDASSS---LSDLSLVATTCWAIWN

Query:  DRNSVVH
         RN+++H
Subjt:  DRNSVVH

AT4G29090.1 Ribonuclease H-like superfamily protein4.6e-2027.31Show/hide
Query:  SGRDLLIKGVRFRLGNGEDISMFRDPWIP--------KISTFKPIRLNGEVSDGKISEFITPSG-SWDLAKLKNSVSSVDYEIIRGL-PINKSLKDKLVW
        + +++L +G R  +GNGEDI ++R  W+         ++    P       S  K+S+ I  SG  W    ++     V+ ++I  L P  + + D   W
Subjt:  SGRDLLIKGVRFRLGNGEDISMFRDPWIP--------KISTFKPIRLNGEVSDGKISEFITPSG-SWDLAKLKNSVSSVDYEIIRGL-PINKSLKDKLVW

Query:  HYDKTGSYTVKSGYKVF--MMNKIDGISS-SSSSISRIWNNLRKLNVPNKIKHFLWKALNNVLPNKLNLLNRNIDISPSCPMCNCYIENTDPCFFGCDRA
         Y  +G YTVKSGY V   ++NK       S  S++ I+  + K     KI+HFLWK L+N LP    L  R++    +C  C    E  +   F C  A
Subjt:  HYDKTGSYTVKSGYKVF--MMNKIDGISS-SSSSISRIWNNLRKLNVPNKIKHFLWKALNNVLPNKLNLLNRNIDISPSCPMCNCYIENTDPCFFGCDRA

Query:  TEIWRLTFDKVFLEDDFGGS-FLDRWWKIDASSSLSD----LSLVATTCWAIWNDRNSVV
           W ++   + L  ++  S +++ +W  +  +          LV    W +W +RN +V
Subjt:  TEIWRLTFDKVFLEDDFGGS-FLDRWWKIDASSSLSD----LSLVATTCWAIWNDRNSVV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGGGACGAGATCTTTTAATTAAAGGAGTTAGGTTTAGGCTAGGTAATGGGGAGGACATTTCTATGTTTAGAGACCCTTGGATCCCAAAAATTTCTACCTTCAAACC
TATTCGACTTAATGGGGAGGTCTCAGATGGGAAAATTTCTGAATTTATTACTCCTTCTGGGAGCTGGGATCTTGCTAAACTTAAGAATTCAGTTTCCAGTGTGGATTATG
AGATTATTAGGGGTTTACCTATTAATAAAAGCTTAAAAGATAAATTAGTTTGGCACTACGACAAAACAGGGTCTTATACAGTAAAAAGCGGATATAAAGTCTTTATGATG
AATAAAATTGATGGTATATCCTCTAGTTCGTCTTCTATAAGCAGAATTTGGAATAATCTACGGAAGCTTAACGTTCCAAACAAAATAAAACATTTTTTATGGAAAGCTTT
GAATAATGTCCTCCCTAATAAGCTCAATTTACTAAATAGGAATATAGATATTTCCCCTTCTTGTCCTATGTGCAATTGTTATATTGAAAATACTGATCCTTGCTTTTTTG
GTTGTGATCGTGCGACGGAGATTTGGAGGCTAACCTTTGATAAAGTTTTTCTGGAGGATGACTTTGGAGGAAGCTTTTTGGATCGATGGTGGAAGATAGATGCATCTTCT
TCTCTCTCGGATCTCAGCCTTGTTGCCACCACGTGTTGGGCGATTTGGAACGACAGAAACAGTGTTGTTCATGGAAAAGGAATCCCAGATATATTTTCTAAAAGCCAATG
GATTGTATCATACCTGGAGAAATTTCACCATGCGACTGCGCGACCTTCTCAGTCTAGGGCTTCGACTACATCTGCAAGGACAGGGGTCAAAAGAAGTAATGGTAATCCCA
GTGCCTCAGTCGCTCTTCATGCAACATCTTCCCATTCAGTTCACTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCGGGACGAGATCTTTTAATTAAAGGAGTTAGGTTTAGGCTAGGTAATGGGGAGGACATTTCTATGTTTAGAGACCCTTGGATCCCAAAAATTTCTACCTTCAAACC
TATTCGACTTAATGGGGAGGTCTCAGATGGGAAAATTTCTGAATTTATTACTCCTTCTGGGAGCTGGGATCTTGCTAAACTTAAGAATTCAGTTTCCAGTGTGGATTATG
AGATTATTAGGGGTTTACCTATTAATAAAAGCTTAAAAGATAAATTAGTTTGGCACTACGACAAAACAGGGTCTTATACAGTAAAAAGCGGATATAAAGTCTTTATGATG
AATAAAATTGATGGTATATCCTCTAGTTCGTCTTCTATAAGCAGAATTTGGAATAATCTACGGAAGCTTAACGTTCCAAACAAAATAAAACATTTTTTATGGAAAGCTTT
GAATAATGTCCTCCCTAATAAGCTCAATTTACTAAATAGGAATATAGATATTTCCCCTTCTTGTCCTATGTGCAATTGTTATATTGAAAATACTGATCCTTGCTTTTTTG
GTTGTGATCGTGCGACGGAGATTTGGAGGCTAACCTTTGATAAAGTTTTTCTGGAGGATGACTTTGGAGGAAGCTTTTTGGATCGATGGTGGAAGATAGATGCATCTTCT
TCTCTCTCGGATCTCAGCCTTGTTGCCACCACGTGTTGGGCGATTTGGAACGACAGAAACAGTGTTGTTCATGGAAAAGGAATCCCAGATATATTTTCTAAAAGCCAATG
GATTGTATCATACCTGGAGAAATTTCACCATGCGACTGCGCGACCTTCTCAGTCTAGGGCTTCGACTACATCTGCAAGGACAGGGGTCAAAAGAAGTAATGGTAATCCCA
GTGCCTCAGTCGCTCTTCATGCAACATCTTCCCATTCAGTTCACTAG
Protein sequenceShow/hide protein sequence
MSGRDLLIKGVRFRLGNGEDISMFRDPWIPKISTFKPIRLNGEVSDGKISEFITPSGSWDLAKLKNSVSSVDYEIIRGLPINKSLKDKLVWHYDKTGSYTVKSGYKVFMM
NKIDGISSSSSSISRIWNNLRKLNVPNKIKHFLWKALNNVLPNKLNLLNRNIDISPSCPMCNCYIENTDPCFFGCDRATEIWRLTFDKVFLEDDFGGSFLDRWWKIDASS
SLSDLSLVATTCWAIWNDRNSVVHGKGIPDIFSKSQWIVSYLEKFHHATARPSQSRASTTSARTGVKRSNGNPSASVALHATSSHSVH