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Lag0022643 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0022643
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionDUF4283 domain-containing protein
Genome locationchr7:34894443..34895359
RNA-Seq ExpressionLag0022643
SyntenyLag0022643
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
OMO61345.1 reverse transcriptase [Corchorus capsularis]1.2e-1431.32Show/hide
Query:  LVDDWACLSLTSEEEEISVTADREAVDRSGQLLGFCLLGKLLCPCPLGVEVMKKIFRATWKIDDGLPVDHLGKNLFIFRFGREADRIRVFNQT-------
        L D W   +LT EEE + V  D   VD +      CL+GKLL   P+ VEVM+ +    WK+  GL V  +G+NLFIF+F  + ++ RV+ QT       
Subjt:  LVDDWACLSLTSEEEEISVTADREAVDRSGQLLGFCLLGKLLCPCPLGVEVMKKIFRATWKIDDGLPVDHLGKNLFIFRFGREADRIRVFNQT-------

Query:  ----------------------------------MAERIGNVV----GVFEDVDNRSDFLFWGASLRIWIRIDLSRPLRHGI
                                          M E IG V+    G  E++D   D + WG  LR   R+++++PLR G+
Subjt:  ----------------------------------MAERIGNVV----GVFEDVDNRSDFLFWGASLRIWIRIDLSRPLRHGI

OMP10859.1 hypothetical protein COLO4_04212 [Corchorus olitorius]3.5e-1429.55Show/hide
Query:  LVDDWACLSLTSEEEEISVTADREAVDRSGQLLGFCLLGKLLCPCPLGVEVMKKIFRATWKIDDGLPVDHLGKNLFIFRFGREADRIRVFNQT-------
        L D W   SLT EEEE  V  D + +  +      CL+GKLL    + +EVM+ I    WK+  GL +  +G  LFIF+F +E ++ RVF Q+       
Subjt:  LVDDWACLSLTSEEEEISVTADREAVDRSGQLLGFCLLGKLLCPCPLGVEVMKKIFRATWKIDDGLPVDHLGKNLFIFRFGREADRIRVFNQT-------

Query:  ----------------------------------MAERIGNVV----GVFEDVDNRSDFLFWGASLRIWIRIDLSRPLRHGIQIYPDGPLSGLW------
                                          M E IG V+    GV E+VD   + + W   LR+ +RI + +PLR G+ +     LS +W      
Subjt:  ----------------------------------MAERIGNVV----GVFEDVDNRSDFLFWGASLRIWIRIDLSRPLRHGIQIYPDGPLSGLW------

Query:  ----IRSRSCVTPQYGDWLR
             +    V  +YG WLR
Subjt:  ----IRSRSCVTPQYGDWLR

XP_022132681.1 uncharacterized protein LOC111005481 [Momordica charantia]1.4e-2329.34Show/hide
Query:  LVDDWACLSLTSEEEEISVTADREAVDRSGQLLGFCLLGKLLCPCPLGVEVMKKIFRATWKID-DGLPVDHLGKNLFIFRFGREADRIRV----------
        L+++W    LTSEE++I+V  D  A++ +G+ L   L+ KLL    +   V+K   +  WK+D     VD +G N+F+F F R +DR R+          
Subjt:  LVDDWACLSLTSEEEEISVTADREAVDRSGQLLGFCLLGKLLCPCPLGVEVMKKIFRATWKID-DGLPVDHLGKNLFIFRFGREADRIRV----------

Query:  -----------------------------------FNQTMAERIGNVVGVFEDVDNRSDFLFWGASLRIWIRIDLSRPLRHGIQIYPDGPLSGLWIR---
                                            N+TMA R+GN +G+FEDV++ ++   WG+ LR+ +R D+ +PL  GI++  DGP+ G WI    
Subjt:  -----------------------------------FNQTMAERIGNVVGVFEDVDNRSDFLFWGASLRIWIRIDLSRPLRHGIQIYPDGPLSGLWIR---

Query:  --------------------SRSCVTP-----QYGDWLRYTG
                            S  CV       QYG WLR+ G
Subjt:  --------------------SRSCVTP-----QYGDWLRYTG

XP_022156185.1 uncharacterized protein LOC111023135 [Momordica charantia]4.7e-2731.34Show/hide
Query:  LVDDWACLSLTSEEEEISVTADREAVDRSGQLLGFCLLGKLLCPCPLGVEVMKKIFRATWKIDDGLPVDHLGKNLFIFRFGREADRIRV-----------
        L+ DW    LTSEE+EI++  D +AV  + Q L + L+GKLL    +  +V+ ++    WK++  L V+ +GKNLF+F F RE D  RV           
Subjt:  LVDDWACLSLTSEEEEISVTADREAVDRSGQLLGFCLLGKLLCPCPLGVEVMKKIFRATWKIDDGLPVDHLGKNLFIFRFGREADRIRV-----------

Query:  ----------------------------------FNQTMAERIGNVVGVFEDVDNRSDFLFWGASLRIWIRIDLSRPLRHGIQIYPDGPLSGLWI-----
                                           N+TMA R+GN +G F DVD       WGASLRI + ID+++PLR GI+I  DGP+ G WI     
Subjt:  ----------------------------------FNQTMAERIGNVVGVFEDVDNRSDFLFWGASLRIWIRIDLSRPLRHGIQIYPDGPLSGLWI-----

Query:  --------------RSRSC------------VTPQYGDWLRYTGRGMISQHFVERDIGRASVRDDPVG
                       S  C             T +YG WLR+ G    +Q   +   G++  R+D  G
Subjt:  --------------RSRSC------------VTPQYGDWLRYTGRGMISQHFVERDIGRASVRDDPVG

XP_022158377.1 uncharacterized protein LOC111024874 [Momordica charantia]3.5e-2231Show/hide
Query:  LVDDWACLSLTSEEEEISVTADREAVDRSGQLLGFCLLGKLLCPCPLGVEVMKKIFRATWKID-DGLPVDHLGKNLFIFRFGREADRIRVF---------
        L+++W    LTSEEEE ++  D  A   +G  L   L+GKL    P+   VMK   R  WK++ +   V  LG NLF+F F R  DR +++         
Subjt:  LVDDWACLSLTSEEEEISVTADREAVDRSGQLLGFCLLGKLLCPCPLGVEVMKKIFRATWKID-DGLPVDHLGKNLFIFRFGREADRIRVF---------

Query:  ------------------------------------NQTMAERIGNVVGVFEDVDNRSDFLFWGASLRIWIRIDLSRPLRHGIQIYPDGPLSGLWI----
                                             + MA R+GN +G FE+ D       WG++LR+ + +D+S+PLR GI++  DGP+ G WI    
Subjt:  ------------------------------------NQTMAERIGNVVGVFEDVDNRSDFLFWGASLRIWIRIDLSRPLRHGIQIYPDGPLSGLWI----

Query:  -----------RSRSCVTPQYGDWLRYTG
                    S S    QYG WLRY G
Subjt:  -----------RSRSCVTPQYGDWLRYTG

TrEMBL top hitse value%identityAlignment
A0A1R3GTB5 Reverse transcriptase5.8e-1531.32Show/hide
Query:  LVDDWACLSLTSEEEEISVTADREAVDRSGQLLGFCLLGKLLCPCPLGVEVMKKIFRATWKIDDGLPVDHLGKNLFIFRFGREADRIRVFNQT-------
        L D W   +LT EEE + V  D   VD +      CL+GKLL   P+ VEVM+ +    WK+  GL V  +G+NLFIF+F  + ++ RV+ QT       
Subjt:  LVDDWACLSLTSEEEEISVTADREAVDRSGQLLGFCLLGKLLCPCPLGVEVMKKIFRATWKIDDGLPVDHLGKNLFIFRFGREADRIRVFNQT-------

Query:  ----------------------------------MAERIGNVV----GVFEDVDNRSDFLFWGASLRIWIRIDLSRPLRHGI
                                          M E IG V+    G  E++D   D + WG  LR   R+++++PLR G+
Subjt:  ----------------------------------MAERIGNVV----GVFEDVDNRSDFLFWGASLRIWIRIDLSRPLRHGI

A0A1R3KUZ6 DUF4283 domain-containing protein1.7e-1429.55Show/hide
Query:  LVDDWACLSLTSEEEEISVTADREAVDRSGQLLGFCLLGKLLCPCPLGVEVMKKIFRATWKIDDGLPVDHLGKNLFIFRFGREADRIRVFNQT-------
        L D W   SLT EEEE  V  D + +  +      CL+GKLL    + +EVM+ I    WK+  GL +  +G  LFIF+F +E ++ RVF Q+       
Subjt:  LVDDWACLSLTSEEEEISVTADREAVDRSGQLLGFCLLGKLLCPCPLGVEVMKKIFRATWKIDDGLPVDHLGKNLFIFRFGREADRIRVFNQT-------

Query:  ----------------------------------MAERIGNVV----GVFEDVDNRSDFLFWGASLRIWIRIDLSRPLRHGIQIYPDGPLSGLW------
                                          M E IG V+    GV E+VD   + + W   LR+ +RI + +PLR G+ +     LS +W      
Subjt:  ----------------------------------MAERIGNVV----GVFEDVDNRSDFLFWGASLRIWIRIDLSRPLRHGIQIYPDGPLSGLW------

Query:  ----IRSRSCVTPQYGDWLR
             +    V  +YG WLR
Subjt:  ----IRSRSCVTPQYGDWLR

A0A6J1BSZ1 uncharacterized protein LOC1110054816.8e-2429.34Show/hide
Query:  LVDDWACLSLTSEEEEISVTADREAVDRSGQLLGFCLLGKLLCPCPLGVEVMKKIFRATWKID-DGLPVDHLGKNLFIFRFGREADRIRV----------
        L+++W    LTSEE++I+V  D  A++ +G+ L   L+ KLL    +   V+K   +  WK+D     VD +G N+F+F F R +DR R+          
Subjt:  LVDDWACLSLTSEEEEISVTADREAVDRSGQLLGFCLLGKLLCPCPLGVEVMKKIFRATWKID-DGLPVDHLGKNLFIFRFGREADRIRV----------

Query:  -----------------------------------FNQTMAERIGNVVGVFEDVDNRSDFLFWGASLRIWIRIDLSRPLRHGIQIYPDGPLSGLWIR---
                                            N+TMA R+GN +G+FEDV++ ++   WG+ LR+ +R D+ +PL  GI++  DGP+ G WI    
Subjt:  -----------------------------------FNQTMAERIGNVVGVFEDVDNRSDFLFWGASLRIWIRIDLSRPLRHGIQIYPDGPLSGLWIR---

Query:  --------------------SRSCVTP-----QYGDWLRYTG
                            S  CV       QYG WLR+ G
Subjt:  --------------------SRSCVTP-----QYGDWLRYTG

A0A6J1DU55 uncharacterized protein LOC1110231352.3e-2731.34Show/hide
Query:  LVDDWACLSLTSEEEEISVTADREAVDRSGQLLGFCLLGKLLCPCPLGVEVMKKIFRATWKIDDGLPVDHLGKNLFIFRFGREADRIRV-----------
        L+ DW    LTSEE+EI++  D +AV  + Q L + L+GKLL    +  +V+ ++    WK++  L V+ +GKNLF+F F RE D  RV           
Subjt:  LVDDWACLSLTSEEEEISVTADREAVDRSGQLLGFCLLGKLLCPCPLGVEVMKKIFRATWKIDDGLPVDHLGKNLFIFRFGREADRIRV-----------

Query:  ----------------------------------FNQTMAERIGNVVGVFEDVDNRSDFLFWGASLRIWIRIDLSRPLRHGIQIYPDGPLSGLWI-----
                                           N+TMA R+GN +G F DVD       WGASLRI + ID+++PLR GI+I  DGP+ G WI     
Subjt:  ----------------------------------FNQTMAERIGNVVGVFEDVDNRSDFLFWGASLRIWIRIDLSRPLRHGIQIYPDGPLSGLWI-----

Query:  --------------RSRSC------------VTPQYGDWLRYTGRGMISQHFVERDIGRASVRDDPVG
                       S  C             T +YG WLR+ G    +Q   +   G++  R+D  G
Subjt:  --------------RSRSC------------VTPQYGDWLRYTGRGMISQHFVERDIGRASVRDDPVG

A0A6J1DX30 uncharacterized protein LOC1110248741.7e-2231Show/hide
Query:  LVDDWACLSLTSEEEEISVTADREAVDRSGQLLGFCLLGKLLCPCPLGVEVMKKIFRATWKID-DGLPVDHLGKNLFIFRFGREADRIRVF---------
        L+++W    LTSEEEE ++  D  A   +G  L   L+GKL    P+   VMK   R  WK++ +   V  LG NLF+F F R  DR +++         
Subjt:  LVDDWACLSLTSEEEEISVTADREAVDRSGQLLGFCLLGKLLCPCPLGVEVMKKIFRATWKID-DGLPVDHLGKNLFIFRFGREADRIRVF---------

Query:  ------------------------------------NQTMAERIGNVVGVFEDVDNRSDFLFWGASLRIWIRIDLSRPLRHGIQIYPDGPLSGLWI----
                                             + MA R+GN +G FE+ D       WG++LR+ + +D+S+PLR GI++  DGP+ G WI    
Subjt:  ------------------------------------NQTMAERIGNVVGVFEDVDNRSDFLFWGASLRIWIRIDLSRPLRHGIQIYPDGPLSGLWI----

Query:  -----------RSRSCVTPQYGDWLRYTG
                    S S    QYG WLRY G
Subjt:  -----------RSRSCVTPQYGDWLRYTG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGGTTGATGATTGGGCTTGTTTGAGCCTTACTTCAGAAGAAGAAGAAATATCGGTGACGGCTGATCGGGAAGCGGTCGATCGTTCGGGTCAATTGTTGGGTTTTTG
TTTGCTGGGCAAGCTTCTCTGTCCCTGTCCTCTGGGAGTTGAGGTTATGAAGAAGATTTTTAGGGCGACATGGAAGATCGATGATGGGTTACCAGTTGATCATTTGGGGA
AGAACCTGTTCATCTTCCGTTTTGGCAGAGAGGCGGATCGCATTCGTGTGTTTAATCAGACAATGGCGGAGAGAATTGGAAATGTCGTTGGAGTCTTTGAAGACGTGGAT
AATCGAAGCGACTTTTTATTCTGGGGAGCAAGCTTGCGAATCTGGATTAGGATTGATTTGTCTCGTCCTCTCAGGCATGGGATTCAGATTTATCCAGATGGTCCGCTTAG
TGGATTATGGATCAGATCAAGGTCTTGTGTCACCCCGCAATATGGGGATTGGCTTCGTTATACAGGGAGAGGGATGATTTCACAACATTTTGTGGAAAGAGATATTGGGC
GTGCCTCTGTTCGGGATGATCCAGTGGGCCAACCTTTGGCTATTGAGGTGTTGCCGGTTCCTGATCCCATAACACCAGCGGATGAAGTTCTCAAGCAATATCAAAGAGGA
ATACACATATCTGAACCGACTGATGGAAACTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTGGTTGATGATTGGGCTTGTTTGAGCCTTACTTCAGAAGAAGAAGAAATATCGGTGACGGCTGATCGGGAAGCGGTCGATCGTTCGGGTCAATTGTTGGGTTTTTG
TTTGCTGGGCAAGCTTCTCTGTCCCTGTCCTCTGGGAGTTGAGGTTATGAAGAAGATTTTTAGGGCGACATGGAAGATCGATGATGGGTTACCAGTTGATCATTTGGGGA
AGAACCTGTTCATCTTCCGTTTTGGCAGAGAGGCGGATCGCATTCGTGTGTTTAATCAGACAATGGCGGAGAGAATTGGAAATGTCGTTGGAGTCTTTGAAGACGTGGAT
AATCGAAGCGACTTTTTATTCTGGGGAGCAAGCTTGCGAATCTGGATTAGGATTGATTTGTCTCGTCCTCTCAGGCATGGGATTCAGATTTATCCAGATGGTCCGCTTAG
TGGATTATGGATCAGATCAAGGTCTTGTGTCACCCCGCAATATGGGGATTGGCTTCGTTATACAGGGAGAGGGATGATTTCACAACATTTTGTGGAAAGAGATATTGGGC
GTGCCTCTGTTCGGGATGATCCAGTGGGCCAACCTTTGGCTATTGAGGTGTTGCCGGTTCCTGATCCCATAACACCAGCGGATGAAGTTCTCAAGCAATATCAAAGAGGA
ATACACATATCTGAACCGACTGATGGAAACTGA
Protein sequenceShow/hide protein sequence
MLVDDWACLSLTSEEEEISVTADREAVDRSGQLLGFCLLGKLLCPCPLGVEVMKKIFRATWKIDDGLPVDHLGKNLFIFRFGREADRIRVFNQTMAERIGNVVGVFEDVD
NRSDFLFWGASLRIWIRIDLSRPLRHGIQIYPDGPLSGLWIRSRSCVTPQYGDWLRYTGRGMISQHFVERDIGRASVRDDPVGQPLAIEVLPVPDPITPADEVLKQYQRG
IHISEPTDGN