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Lag0022645 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0022645
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr7:34897295..34897696
RNA-Seq ExpressionLag0022645
SyntenyLag0022645
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_010666352.1 PREDICTED: uncharacterized protein LOC104883509 [Beta vulgaris subsp. vulgaris]1.4e-2040.17Show/hide
Query:  RHQQNWIHGVEDSDGNWQSELETTRASFVNYFTNIFSSVQPDQGALDLVIDHIPKKVTKEMNQRLMAPYTREEVFATVKGFHPTKAPSPNGFPTVFYKKY
        R ++N+IHG++D DG WQ+E E      V YF  IF+S +P +  L  V+ H+   VT+E N  L+ PYT+EE++A +   HP KAP P+G   +FY+++
Subjt:  RHQQNWIHGVEDSDGNWQSELETTRASFVNYFTNIFSSVQPDQGALDLVIDHIPKKVTKEMNQRLMAPYTREEVFATVKGFHPTKAPSPNGFPTVFYKKY

Query:  WEIVGQATVSICLAILN
        W I+G    +    IL+
Subjt:  WEIVGQATVSICLAILN

XP_015388020.1 uncharacterized protein LOC107177951 [Citrus sinensis]2.6e-2237.5Show/hide
Query:  RHQQNWIHGVEDSDGNWQSELETTRASFVNYFTNIFSSVQPDQGALDLVIDHIPKKVTKEMNQRLMAPYTREEVFATVKGFHPTKAPSPNGFPTVFYKKY
        R ++NWI G+ D +  W  + E     F  Y+ N+F+S  P Q  L+L + ++P KV+ EMN  L  P+T  ++   +   HPTKAP P+G PT F++K+
Subjt:  RHQQNWIHGVEDSDGNWQSELETTRASFVNYFTNIFSSVQPDQGALDLVIDHIPKKVTKEMNQRLMAPYTREEVFATVKGFHPTKAPSPNGFPTVFYKKY

Query:  WEIVGQATVSICLAILNLDASVHEWNHT
        W  V +  ++ CL ILN   ++   NHT
Subjt:  WEIVGQATVSICLAILNLDASVHEWNHT

XP_023878301.1 uncharacterized protein LOC111990748 [Quercus suber]5.4e-2041.09Show/hide
Query:  RHQQNWIHGVEDSDGNWQSELETTRASFVNYFTNIFSSVQPDQGALDLVIDHIPKKVTKEMNQRLMAPYTREEVFATVKGFHPTKAPSPNGFPTVFYKKY
        R +QN I G+ D  G W    E+   + ++YF NI+SS  P Q  ++ V + IP KVT+EMN+ L+  +T+EEV   +K  HP KAP P+G   VF++KY
Subjt:  RHQQNWIHGVEDSDGNWQSELETTRASFVNYFTNIFSSVQPDQGALDLVIDHIPKKVTKEMNQRLMAPYTREEVFATVKGFHPTKAPSPNGFPTVFYKKY

Query:  WEIVGQATVSICLAILNLDASVHEWNHTS
        W IVG     + L +LN +  + E N T+
Subjt:  WEIVGQATVSICLAILNLDASVHEWNHTS

XP_023881891.1 uncharacterized protein LOC111994244 [Quercus suber]3.2e-2041.86Show/hide
Query:  RHQQNWIHGVEDSDGNWQSELETTRASFVNYFTNIFSSVQPDQGALDLVIDHIPKKVTKEMNQRLMAPYTREEVFATVKGFHPTKAPSPNGFPTVFYKKY
        R ++N I+G+ D +GNWQ   E      V+YF  I+SS  P +  +  V+D IP  VT+EMN  L+  +TREE+   +   HPTKAP P+G   +F++KY
Subjt:  RHQQNWIHGVEDSDGNWQSELETTRASFVNYFTNIFSSVQPDQGALDLVIDHIPKKVTKEMNQRLMAPYTREEVFATVKGFHPTKAPSPNGFPTVFYKKY

Query:  WEIVGQATVSICLAILNLDASVHEWNHTS
        W IVG   V + L +LN + S+ E N T+
Subjt:  WEIVGQATVSICLAILNLDASVHEWNHTS

XP_024038343.1 uncharacterized protein LOC112097373 [Citrus clementina]6.4e-2140.62Show/hide
Query:  RHQQNWIHGVEDSDGNWQSELETTRASFVNYFTNIFSSVQPDQGALDLVIDHIPKKVTKEMNQRLMAPYTREEVFATVKGFHPTKAPSPNGFPTVFYKKY
        R ++N I G+E++ GNW    E     F  YFTN+F++ +P+Q  +   +  I ++V+ EMN+ L  P+T EEV   +    PTKAP P+G P VF++K+
Subjt:  RHQQNWIHGVEDSDGNWQSELETTRASFVNYFTNIFSSVQPDQGALDLVIDHIPKKVTKEMNQRLMAPYTREEVFATVKGFHPTKAPSPNGFPTVFYKKY

Query:  WEIVGQATVSICLAILNLDASVHEWNHT
        W+ V Q  +S CL ILN    V  +NHT
Subjt:  WEIVGQATVSICLAILNLDASVHEWNHT

TrEMBL top hitse value%identityAlignment
A0A2N9I2P8 Reverse transcriptase domain-containing protein1.1e-1838.28Show/hide
Query:  RHQQNWIHGVEDSDGNWQSELETTRASFVNYFTNIFSSVQPDQGALDLVIDHIPKKVTKEMNQRLMAPYTREEVFATVKGFHPTKAPSPNGFPTVFYKKY
        R Q N I G+ D D  WQ+E        V YF NIF+S QP    ++  ++ +   VT +MN  L+A +T EEVFA ++  +PTKAP P+G   +FY+ Y
Subjt:  RHQQNWIHGVEDSDGNWQSELETTRASFVNYFTNIFSSVQPDQGALDLVIDHIPKKVTKEMNQRLMAPYTREEVFATVKGFHPTKAPSPNGFPTVFYKKY

Query:  WEIVGQATVSICLAILNLDASVHEWNHT
        WE+VG       L+I++    + + N+T
Subjt:  WEIVGQATVSICLAILNLDASVHEWNHT

A0A6J5X705 Reverse transcriptase domain-containing protein8.5e-1937.21Show/hide
Query:  RHQQNWIHGVEDSDGNWQSELETTRASFVNYFTNIFSSVQPDQGALDL-VIDHIPKKVTKEMNQRLMAPYTREEVFATVKGFHPTKAPSPNGFPTVFYKK
        R ++N + G+ D +  WQSE +     FV +FTN+F+S   D G  D+ V   +  +V+      L+ PY+R+E+   +    P+KAP P+G P +FY+K
Subjt:  RHQQNWIHGVEDSDGNWQSELETTRASFVNYFTNIFSSVQPDQGALDL-VIDHIPKKVTKEMNQRLMAPYTREEVFATVKGFHPTKAPSPNGFPTVFYKK

Query:  YWEIVGQATVSICLAILNLDASVHEWNHT
        YW IVG     +CL +LN    V+++NHT
Subjt:  YWEIVGQATVSICLAILNLDASVHEWNHT

A0A7N2MR00 Uncharacterized protein7.7e-2040.31Show/hide
Query:  RHQQNWIHGVEDSDGNWQSELETTRASFVNYFTNIFSSVQPDQGALDLVIDHIPKKVTKEMNQRLMAPYTREEVFATVKGFHPTKAPSPNGFPTVFYKKY
        R ++N I G+ D +GNW    E+  A+ + YF  +F++  P +  +    + IP KVT EMNQ L+A +TREEV   +K  HPTKAP P+G   +F++KY
Subjt:  RHQQNWIHGVEDSDGNWQSELETTRASFVNYFTNIFSSVQPDQGALDLVIDHIPKKVTKEMNQRLMAPYTREEVFATVKGFHPTKAPSPNGFPTVFYKKY

Query:  WEIVGQATVSICLAILNLDASVHEWNHTS
        W++VG     + L +LN D S+ + N T+
Subjt:  WEIVGQATVSICLAILNLDASVHEWNHTS

A0A803PYI0 Uncharacterized protein1.1e-1839.06Show/hide
Query:  RHQQNWIHGVEDSDGNWQSELETTRASFVNYFTNIFSSVQPDQGALDLVIDHIPKKVTKEMNQRLMAPYTREEVFATVKGFHPTKAPSPNGFPTVFYKKY
        R ++N I G+ D  G W SE    +    NYF NIF S        + VI+ IP KVT +MN+ L+  +T +E+   VK  +PTKAP  NG P +FY+K+
Subjt:  RHQQNWIHGVEDSDGNWQSELETTRASFVNYFTNIFSSVQPDQGALDLVIDHIPKKVTKEMNQRLMAPYTREEVFATVKGFHPTKAPSPNGFPTVFYKKY

Query:  WEIVGQATVSICLAILNLDASVHEWNHT
        W  + Q  + +CL +LN  A++   N T
Subjt:  WEIVGQATVSICLAILNLDASVHEWNHT

F4NCJ4 Reverse transcriptase domain-containing protein3.8e-1937.61Show/hide
Query:  RHQQNWIHGVEDSDGNWQSELETTRASFVNYFTNIFSSVQPDQGALDLVIDHIPKKVTKEMNQRLMAPYTREEVFATVKGFHPTKAPSPNGFPTVFYKKY
        R ++N IHG+ D  G WQ+E E        YF  IF+S +P       V+ H+ + VT+E N  L+ PY++EE+FA +   HP KAP P+G   +FY+++
Subjt:  RHQQNWIHGVEDSDGNWQSELETTRASFVNYFTNIFSSVQPDQGALDLVIDHIPKKVTKEMNQRLMAPYTREEVFATVKGFHPTKAPSPNGFPTVFYKKY

Query:  WEIVGQATVSICLAILN
        W I+G    +   +IL+
Subjt:  WEIVGQATVSICLAILN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGCATCAACAAAACTGGATTCATGGAGTAGAGGATTCTGACGGAAACTGGCAATCAGAGCTGGAGACTACTCGTGCATCTTTTGTGAATTATTTCACAAATATATT
CTCTTCGGTTCAGCCTGATCAGGGGGCCTTGGATTTGGTGATTGATCATATTCCCAAGAAAGTCACTAAGGAGATGAATCAGAGGCTTATGGCTCCGTATACACGGGAAG
AGGTTTTTGCAACAGTTAAAGGTTTTCATCCAACCAAGGCTCCGAGTCCGAACGGTTTTCCAACTGTTTTTTATAAAAAATATTGGGAGATTGTTGGCCAAGCTACGGTG
TCGATCTGTTTGGCCATATTGAATTTGGATGCGTCGGTGCATGAATGGAATCATACATCCAACTATGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGAGGCATCAACAAAACTGGATTCATGGAGTAGAGGATTCTGACGGAAACTGGCAATCAGAGCTGGAGACTACTCGTGCATCTTTTGTGAATTATTTCACAAATATATT
CTCTTCGGTTCAGCCTGATCAGGGGGCCTTGGATTTGGTGATTGATCATATTCCCAAGAAAGTCACTAAGGAGATGAATCAGAGGCTTATGGCTCCGTATACACGGGAAG
AGGTTTTTGCAACAGTTAAAGGTTTTCATCCAACCAAGGCTCCGAGTCCGAACGGTTTTCCAACTGTTTTTTATAAAAAATATTGGGAGATTGTTGGCCAAGCTACGGTG
TCGATCTGTTTGGCCATATTGAATTTGGATGCGTCGGTGCATGAATGGAATCATACATCCAACTATGAATGA
Protein sequenceShow/hide protein sequence
MRHQQNWIHGVEDSDGNWQSELETTRASFVNYFTNIFSSVQPDQGALDLVIDHIPKKVTKEMNQRLMAPYTREEVFATVKGFHPTKAPSPNGFPTVFYKKYWEIVGQATV
SICLAILNLDASVHEWNHTSNYE