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Lag0022658 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0022658
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionTy3-gypsy retrotransposon protein
Genome locationchr7:35092176..35092556
RNA-Seq ExpressionLag0022658
SyntenyLag0022658
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_031735972.1 uncharacterized protein LOC116401693 [Cucumis sativus]1.7e-1548Show/hide
Query:  MAPKKAPAKVTTLSNSYTGHVTCSRSQGIEIKEDHTPLTVASRISKLIEESSKDKVAVKDTPLIESFAPTSEQPKDTLNPHVMSVMMADVDQDERMAKME
        MA KKA +K +  S++YTG +T SRS+GI I+       +A  I K + ES K  + +K+ PL   +   S +     +P VMSVMMADV  +  MA+ME
Subjt:  MAPKKAPAKVTTLSNSYTGHVTCSRSQGIEIKEDHTPLTVASRISKLIEESSKDKVAVKDTPLIESFAPTSEQPKDTLNPHVMSVMMADVDQDERMAKME

Query:  R-INLLMNAVDERDHEIAYLKNQLQ
        R INLLM  VDERDHEIA LK Q+Q
Subjt:  R-INLLMNAVDERDHEIAYLKNQLQ
XP_031737053.1 uncharacterized protein LOC116402138 [Cucumis sativus]1.7e-1548Show/hide
Query:  MAPKKAPAKVTTLSNSYTGHVTCSRSQGIEIKEDHTPLTVASRISKLIEESSKDKVAVKDTPLIESFAPTSEQPKDTLNPHVMSVMMADVDQDERMAKME
        MA KKA +K +  S++YTG +T SRS+GI I+       +A  I K + ES K  + +K+ PL   +   S +     +P VMSVMMADV  +  MA+ME
Subjt:  MAPKKAPAKVTTLSNSYTGHVTCSRSQGIEIKEDHTPLTVASRISKLIEESSKDKVAVKDTPLIESFAPTSEQPKDTLNPHVMSVMMADVDQDERMAKME

Query:  R-INLLMNAVDERDHEIAYLKNQLQ
        R INLLM  VDERDHEIA LK Q+Q
Subjt:  R-INLLMNAVDERDHEIAYLKNQLQ
XP_031739134.1 uncharacterized protein LOC116402863 [Cucumis sativus]1.7e-1548Show/hide
Query:  MAPKKAPAKVTTLSNSYTGHVTCSRSQGIEIKEDHTPLTVASRISKLIEESSKDKVAVKDTPLIESFAPTSEQPKDTLNPHVMSVMMADVDQDERMAKME
        MA KKA +K +  S++YTG +T SRS+GI I+       +A  I K + ES K  + +K+ PL   +   S +     +P VMSVMMADV  +  MA+ME
Subjt:  MAPKKAPAKVTTLSNSYTGHVTCSRSQGIEIKEDHTPLTVASRISKLIEESSKDKVAVKDTPLIESFAPTSEQPKDTLNPHVMSVMMADVDQDERMAKME

Query:  R-INLLMNAVDERDHEIAYLKNQLQ
        R INLLM  VDERDHEIA LK Q+Q
Subjt:  R-INLLMNAVDERDHEIAYLKNQLQ
XP_031742032.1 uncharacterized protein LOC116404025 [Cucumis sativus]1.7e-1548Show/hide
Query:  MAPKKAPAKVTTLSNSYTGHVTCSRSQGIEIKEDHTPLTVASRISKLIEESSKDKVAVKDTPLIESFAPTSEQPKDTLNPHVMSVMMADVDQDERMAKME
        MA KKA +K +  S++YTG +T SRS+GI I+       +A  I K + ES K  + +K+ PL   +   S +     +P VMSVMMADV  +  MA+ME
Subjt:  MAPKKAPAKVTTLSNSYTGHVTCSRSQGIEIKEDHTPLTVASRISKLIEESSKDKVAVKDTPLIESFAPTSEQPKDTLNPHVMSVMMADVDQDERMAKME

Query:  R-INLLMNAVDERDHEIAYLKNQLQ
        R INLLM  VDERDHEIA LK Q+Q
Subjt:  R-INLLMNAVDERDHEIAYLKNQLQ
XP_031742199.1 uncharacterized protein LOC105435721 [Cucumis sativus]1.7e-1548Show/hide
Query:  MAPKKAPAKVTTLSNSYTGHVTCSRSQGIEIKEDHTPLTVASRISKLIEESSKDKVAVKDTPLIESFAPTSEQPKDTLNPHVMSVMMADVDQDERMAKME
        MA KKA +K +  S++YTG +T SRS+GI I+       +A  I K + ES K  + +K+ PL   +   S +     +P VMSVMMADV  +  MA+ME
Subjt:  MAPKKAPAKVTTLSNSYTGHVTCSRSQGIEIKEDHTPLTVASRISKLIEESSKDKVAVKDTPLIESFAPTSEQPKDTLNPHVMSVMMADVDQDERMAKME

Query:  R-INLLMNAVDERDHEIAYLKNQLQ
        R INLLM  VDERDHEIA LK Q+Q
Subjt:  R-INLLMNAVDERDHEIAYLKNQLQ
TrEMBL top hitse value%identityAlignment
A0A5A7U8B3 Ty3-gypsy retrotransposon protein1.0e-1341.6Show/hide
Query:  MAPKKAPAKVTTLSNSYTGHVTCSRSQGIEIKEDHTPLTVASRISKLIEESSKDKVAVKDTPLIESFAPTSEQPKDTLNPHVMSVMMADVDQDERMAKME
        MA KK  +    +S++YTG +TCSRS+GI  ++D     VA  I + + ES K  + +K+ PL ++   TS + K   +P VMSV+MAD+  +  MA+ME
Subjt:  MAPKKAPAKVTTLSNSYTGHVTCSRSQGIEIKEDHTPLTVASRISKLIEESSKDKVAVKDTPLIESFAPTSEQPKDTLNPHVMSVMMADVDQDERMAKME

Query:  R-INLLMNAVDERDHEIAYLKNQLQ
        R IN L+  V+E+DHEI  L+ Q++
Subjt:  R-INLLMNAVDERDHEIAYLKNQLQ
A0A5A7VFQ8 Ty3-gypsy retrotransposon protein2.3e-1342.74Show/hide
Query:  MAPKKAPAKVTTLSNSYTGHVTCSRSQGIEIKEDHTPLTVASRISKLIEESSKDKVAVKDTPLIESFAPTSEQPKDTLNPHVMSVMMADVDQDERMAKME
        MA KKA +K +  S++Y G +T SRS+GI  ++D     VA  I K + ES K  + +K+ PL ++   TS + K    P VMSVMMAD+  +  M  ME
Subjt:  MAPKKAPAKVTTLSNSYTGHVTCSRSQGIEIKEDHTPLTVASRISKLIEESSKDKVAVKDTPLIESFAPTSEQPKDTLNPHVMSVMMADVDQDERMAKME

Query:  R-INLLMNAVDERDHEIAYLKNQL
        R +N LM  ++ERDHEI  L++Q+
Subjt:  R-INLLMNAVDERDHEIAYLKNQL
A0A5D3BY54 Ty3-gypsy retrotransposon protein2.4e-1545.6Show/hide
Query:  MAPKKAPAKVTTLSNSYTGHVTCSRSQGIEIKEDHTPLTVASRISKLIEESSKDKVAVKDTPLIESFAPTSEQPKDTLNPHVMSVMMADVDQDERMAKME
        MA KKA +  +  SN+YTG +T SRS+GI  ++D     VA  I K + ES K  + +K+ PL ++   +S + K   +P VMSVMMAD+  +  MA+ME
Subjt:  MAPKKAPAKVTTLSNSYTGHVTCSRSQGIEIKEDHTPLTVASRISKLIEESSKDKVAVKDTPLIESFAPTSEQPKDTLNPHVMSVMMADVDQDERMAKME

Query:  R-INLLMNAVDERDHEIAYLKNQLQ
        R IN LM AV+ERDHEI  L+ Q++
Subjt:  R-INLLMNAVDERDHEIAYLKNQLQ
A0A5D3C3J8 Ty3-gypsy retrotransposon protein1.2e-1444.8Show/hide
Query:  MAPKKAPAKVTTLSNSYTGHVTCSRSQGIEIKEDHTPLTVASRISKLIEESSKDKVAVKDTPLIESFAPTSEQPKDTLNPHVMSVMMADVDQDERMAKME
        MA KKA +  +  +++YTG +T SR +GI I+E      VA  I K + ES K  + +K+ PL ++    S + K   +P VMSVMMAD+  +  MA+ME
Subjt:  MAPKKAPAKVTTLSNSYTGHVTCSRSQGIEIKEDHTPLTVASRISKLIEESSKDKVAVKDTPLIESFAPTSEQPKDTLNPHVMSVMMADVDQDERMAKME

Query:  R-INLLMNAVDERDHEIAYLKNQLQ
        R IN LMN V+ERDHEI  L+ Q+Q
Subjt:  R-INLLMNAVDERDHEIAYLKNQLQ
A0A5D3DKU9 Ty3-gypsy retrotransposon protein1.0e-1341.6Show/hide
Query:  MAPKKAPAKVTTLSNSYTGHVTCSRSQGIEIKEDHTPLTVASRISKLIEESSKDKVAVKDTPLIESFAPTSEQPKDTLNPHVMSVMMADVDQDERMAKME
        MA KK  +    +S++YTG +TCSRS+GI  ++D     VA  I + + ES K  + +K+ PL ++   TS + K   +P VMSV+MAD+  +  MA+ME
Subjt:  MAPKKAPAKVTTLSNSYTGHVTCSRSQGIEIKEDHTPLTVASRISKLIEESSKDKVAVKDTPLIESFAPTSEQPKDTLNPHVMSVMMADVDQDERMAKME

Query:  R-INLLMNAVDERDHEIAYLKNQLQ
        R IN L+  V+E+DHEI  L+ Q++
Subjt:  R-INLLMNAVDERDHEIAYLKNQLQ
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGGCACCAAAGAAAGCTCCCGCGAAGGTAACAACATTGAGCAACTCTTATACGGGTCATGTCACTTGTAGTCGTTCCCAAGGAATTGAGATCAAGGAGGATCACAC
TCCTCTCACTGTTGCAAGTAGGATCTCAAAATTGATTGAAGAATCCTCTAAGGACAAGGTTGCAGTCAAAGACACCCCGTTGATCGAATCTTTCGCTCCAACATCTGAGC
AACCAAAGGACACACTAAATCCTCATGTGATGTCTGTCATGATGGCTGACGTAGACCAAGATGAAAGGATGGCGAAGATGGAAAGAATCAATCTCCTAATGAATGCAGTT
GATGAAAGAGATCATGAGATTGCCTATTTGAAGAACCAGCTACAAAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGATGGCACCAAAGAAAGCTCCCGCGAAGGTAACAACATTGAGCAACTCTTATACGGGTCATGTCACTTGTAGTCGTTCCCAAGGAATTGAGATCAAGGAGGATCACAC
TCCTCTCACTGTTGCAAGTAGGATCTCAAAATTGATTGAAGAATCCTCTAAGGACAAGGTTGCAGTCAAAGACACCCCGTTGATCGAATCTTTCGCTCCAACATCTGAGC
AACCAAAGGACACACTAAATCCTCATGTGATGTCTGTCATGATGGCTGACGTAGACCAAGATGAAAGGATGGCGAAGATGGAAAGAATCAATCTCCTAATGAATGCAGTT
GATGAAAGAGATCATGAGATTGCCTATTTGAAGAACCAGCTACAAAATTGA
Protein sequenceShow/hide protein sequence
MMAPKKAPAKVTTLSNSYTGHVTCSRSQGIEIKEDHTPLTVASRISKLIEESSKDKVAVKDTPLIESFAPTSEQPKDTLNPHVMSVMMADVDQDERMAKMERINLLMNAV
DERDHEIAYLKNQLQN