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Lag0022662 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0022662
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionDNA-directed RNA polymerase V subunit 5C-like
Genome locationchr7:35185533..35185853
RNA-Seq ExpressionLag0022662
SyntenyLag0022662
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG4141194.1 hypothetical protein ERO13_D06G060950v2 [Gossypium hirsutum]4.8e-1143.16Show/hide
Query:  LCGKWVLKGHGG-SCQKEKRTFQSAYLKREANTWMGFIRQRMLPTTHDSTVSRERVLLAFAILRSLSIDVGKIIVNEISGCWKKKVGKLFFPNTL
        L  +W+++ +G  SC++E       YLK  AN W+ F+    +PT+H ST+S ER+LL +AIL   SI+VG II+ EI    KKKVG  +FP+ +
Subjt:  LCGKWVLKGHGG-SCQKEKRTFQSAYLKREANTWMGFIRQRMLPTTHDSTVSRERVLLAFAILRSLSIDVGKIIVNEISGCWKKKVGKLFFPNTL

TYG37159.1 hypothetical protein ES288_D13G120000v1 [Gossypium darwinii]2.4e-1038.95Show/hide
Query:  LCGKWVLKGHGG-SCQKEKRTFQSAYLKREANTWMGFIRQRMLPTTHDSTVSRERVLLAFAILRSLSIDVGKIIVNEISGCWKKKVGKLFFPNTL
        L  +W+++ +G  SC++E       YLK  A  W  F+R   +P  H ST+S E++LL + IL   SI++GKII+ EI  C K K G  +FP+ +
Subjt:  LCGKWVLKGHGG-SCQKEKRTFQSAYLKREANTWMGFIRQRMLPTTHDSTVSRERVLLAFAILRSLSIDVGKIIVNEISGCWKKKVGKLFFPNTL

TYG52543.1 hypothetical protein ES288_D09G036700v1 [Gossypium darwinii]2.8e-1142.11Show/hide
Query:  LCGKWVLKGHGG-SCQKEKRTFQSAYLKREANTWMGFIRQRMLPTTHDSTVSRERVLLAFAILRSLSIDVGKIIVNEISGCWKKKVGKLFFPNTL
        L  +W+++ +G  SCQ+E       YLK  A  W  F+R   +P +H ST+S E +LL +AIL   SI+VGKII+ EI  C KKK    +FP+ +
Subjt:  LCGKWVLKGHGG-SCQKEKRTFQSAYLKREANTWMGFIRQRMLPTTHDSTVSRERVLLAFAILRSLSIDVGKIIVNEISGCWKKKVGKLFFPNTL

TYH88163.1 hypothetical protein ES332_D01G168900v1 [Gossypium tomentosum]7.4e-1242.39Show/hide
Query:  KWVLKGHGG-SCQKEKRTFQSAYLKREANTWMGFIRQRMLPTTHDSTVSRERVLLAFAILRSLSIDVGKIIVNEISGCWKKKVGKLFFPNTL
        +W+++ +G  SC++E       YLK  AN W  F++   +P +H  T+S ER+LL +AIL   SI+VGKII+ EI  C KKK G ++FP+ +
Subjt:  KWVLKGHGG-SCQKEKRTFQSAYLKREANTWMGFIRQRMLPTTHDSTVSRERVLLAFAILRSLSIDVGKIIVNEISGCWKKKVGKLFFPNTL

XP_024971944.1 uncharacterized protein LOC112510826 [Cynara cardunculus var. scolymus]8.2e-1142.11Show/hide
Query:  RTFQSAYLKREANTWMGFIRQRMLPTTHDSTVSRERVLLAFAILRSLSIDVGKIIVNEISGCWKKKVGKLFFPNTL
        RT++++ LK  AN W+ FIR  + PTTHDS++S E+++L + ++   +I+VGK++   I  C K++ GKLFFP+ +
Subjt:  RTFQSAYLKREANTWMGFIRQRMLPTTHDSTVSRERVLLAFAILRSLSIDVGKIIVNEISGCWKKKVGKLFFPNTL

TrEMBL top hitse value%identityAlignment
A0A2P5CEY2 Uncharacterized protein1.7e-0937.36Show/hide
Query:  HGGSCQKEKRTFQSAYLKREANTWMGFIRQRMLPTTHDSTVSRERVLLAFAILRSLSIDVGKIIVNEISGCWKKKVGKLFFPNTLPCFARS
        H  + Q      +   L   A  W  F++ R+LPTTH  TVS++R+LL +++L   SI+VG++I +EI  C  +K G LFFP+ +    R+
Subjt:  HGGSCQKEKRTFQSAYLKREANTWMGFIRQRMLPTTHDSTVSRERVLLAFAILRSLSIDVGKIIVNEISGCWKKKVGKLFFPNTLPCFARS

A0A5D1ZYC3 Uncharacterized protein1.2e-1038.95Show/hide
Query:  LCGKWVLKGHGG-SCQKEKRTFQSAYLKREANTWMGFIRQRMLPTTHDSTVSRERVLLAFAILRSLSIDVGKIIVNEISGCWKKKVGKLFFPNTL
        L  +W+++ +G  SC++E       YLK  A  W  F+R   +P  H ST+S E++LL + IL   SI++GKII+ EI  C K K G  +FP+ +
Subjt:  LCGKWVLKGHGG-SCQKEKRTFQSAYLKREANTWMGFIRQRMLPTTHDSTVSRERVLLAFAILRSLSIDVGKIIVNEISGCWKKKVGKLFFPNTL

A0A5D2B8V0 Uncharacterized protein1.4e-1142.11Show/hide
Query:  LCGKWVLKGHGG-SCQKEKRTFQSAYLKREANTWMGFIRQRMLPTTHDSTVSRERVLLAFAILRSLSIDVGKIIVNEISGCWKKKVGKLFFPNTL
        L  +W+++ +G  SCQ+E       YLK  A  W  F+R   +P +H ST+S E +LL +AIL   SI+VGKII+ EI  C KKK    +FP+ +
Subjt:  LCGKWVLKGHGG-SCQKEKRTFQSAYLKREANTWMGFIRQRMLPTTHDSTVSRERVLLAFAILRSLSIDVGKIIVNEISGCWKKKVGKLFFPNTL

A0A5D2MA47 Uncharacterized protein3.6e-1242.39Show/hide
Query:  KWVLKGHGG-SCQKEKRTFQSAYLKREANTWMGFIRQRMLPTTHDSTVSRERVLLAFAILRSLSIDVGKIIVNEISGCWKKKVGKLFFPNTL
        +W+++ +G  SC++E       YLK  AN W  F++   +P +H  T+S ER+LL +AIL   SI+VGKII+ EI  C KKK G ++FP+ +
Subjt:  KWVLKGHGG-SCQKEKRTFQSAYLKREANTWMGFIRQRMLPTTHDSTVSRERVLLAFAILRSLSIDVGKIIVNEISGCWKKKVGKLFFPNTL

A0A5D2Q4A4 Uncharacterized protein2.0e-1040Show/hide
Query:  LCGKWVLKGHGG-SCQKEKRTFQSAYLKREANTWMGFIRQRMLPTTHDSTVSRERVLLAFAILRSLSIDVGKIIVNEISGCWKKKVGKLFFPNTL
        L  +W ++ +G  SCQ+E       YLK  A  W  F+R   +P +H ST+  E++L  + IL   SI+VGKII+ EI  C KKK+G  +FP+ +
Subjt:  LCGKWVLKGHGG-SCQKEKRTFQSAYLKREANTWMGFIRQRMLPTTHDSTVSRERVLLAFAILRSLSIDVGKIIVNEISGCWKKKVGKLFFPNTL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTGTGCGGGAAGTGGGTATTGAAGGGGCACGGTGGCAGCTGTCAAAAAGAGAAAAGGACGTTTCAGTCAGCTTATCTGAAGAGGGAAGCGAACACATGGATGGGGTT
TATCAGACAGAGGATGCTTCCAACGACTCATGACTCGACGGTCTCTAGGGAACGGGTTCTTCTGGCTTTCGCGATTTTGCGGTCTCTCAGCATTGATGTAGGGAAGATTA
TTGTTAATGAGATATCTGGTTGTTGGAAGAAGAAGGTGGGGAAGCTGTTTTTCCCGAATACATTACCATGCTTTGCAAGGAGCAGGGGTTCCAGAGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGCTGTGCGGGAAGTGGGTATTGAAGGGGCACGGTGGCAGCTGTCAAAAAGAGAAAAGGACGTTTCAGTCAGCTTATCTGAAGAGGGAAGCGAACACATGGATGGGGTT
TATCAGACAGAGGATGCTTCCAACGACTCATGACTCGACGGTCTCTAGGGAACGGGTTCTTCTGGCTTTCGCGATTTTGCGGTCTCTCAGCATTGATGTAGGGAAGATTA
TTGTTAATGAGATATCTGGTTGTTGGAAGAAGAAGGTGGGGAAGCTGTTTTTCCCGAATACATTACCATGCTTTGCAAGGAGCAGGGGTTCCAGAGAATGA
Protein sequenceShow/hide protein sequence
MLCGKWVLKGHGGSCQKEKRTFQSAYLKREANTWMGFIRQRMLPTTHDSTVSRERVLLAFAILRSLSIDVGKIIVNEISGCWKKKVGKLFFPNTLPCFARSRGSRE