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Lag0022666 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0022666
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionPMD domain-containing protein
Genome locationchr7:35285788..35287024
RNA-Seq ExpressionLag0022666
SyntenyLag0022666
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0034815.1 hypothetical protein E6C27_scaffold213G00490 [Cucumis melo var. makuwa]7.9e-1043.62Show/hide
Query:  WPPPLN-LRTISDWRTFNFLMDLWTFGGLPIRGRFYEEVIPSFEELTG-SNNQAKHLPKSCEHLFHAFYCL-TLQELTIPTFQSAPGLPSGSKV
        W P  N L T++   + + L DLW+FGGLPI+G FYEE IPSF+ELT  S ++ K LP +C++LF A+Y + T ++    +   +   P GSK+
Subjt:  WPPPLN-LRTISDWRTFNFLMDLWTFGGLPIRGRFYEEVIPSFEELTG-SNNQAKHLPKSCEHLFHAFYCL-TLQELTIPTFQSAPGLPSGSKV

KAA0042126.1 hypothetical protein E6C27_scaffold67G006100 [Cucumis melo var. makuwa]3.5e-1046.32Show/hide
Query:  WPPPLN-LRTISDWRTFNFLMDLWTFGGLPIRGRFYEEVIPSFEELTG-SNNQAKHLPKSCEHLFHAFYCL--TLQELTIPTFQSAPGLPSGSKV
        W P  N L T++   + + L DLW+FGGLPI+G FYEE IPSF+ELT  S ++ K LP +C++LF A+Y +  T +E   P  +S   L  GSK+
Subjt:  WPPPLN-LRTISDWRTFNFLMDLWTFGGLPIRGRFYEEVIPSFEELTG-SNNQAKHLPKSCEHLFHAFYCL--TLQELTIPTFQSAPGLPSGSKV

KAA0046555.1 hypothetical protein E6C27_scaffold114G00780 [Cucumis melo var. makuwa]6.4e-1233.11Show/hide
Query:  YLVLLKDNNQPIRSGLSFLVEEPKTGRLAAQWP--------PPLNL-------RTISDWRTFN--------------------------------FLMDL
        +LV+L D NQP   GL+ +VE+P  G  A  WP        P L++       ++ + W T                                  +  DL
Subjt:  YLVLLKDNNQPIRSGLSFLVEEPKTGRLAAQWP--------PPLNL-------RTISDWRTFN--------------------------------FLMDL

Query:  WTFGGLPIRGRFYEEVIPSFEELTGS-NNQAKHLPKSCEHLFHAFYCL
        W+FGGLPI+G FYEE IPSF+ELT +  ++ K LP +C++LF A+Y +
Subjt:  WTFGGLPIRGRFYEEVIPSFEELTGS-NNQAKHLPKSCEHLFHAFYCL

TYK02261.1 hypothetical protein E5676_scaffold18G00620 [Cucumis melo var. makuwa]1.3e-0943.62Show/hide
Query:  WPPPLN-LRTISDWRTFNFLMDLWTFGGLPIRGRFYEEVIPSFEELTG-SNNQAKHLPKSCEHLFHAFYCLTLQELTIPTFQS-APGLPSGSKV
        W P  N L T++   + + L DLW+FGGLPI+G FYEE IPSF+ELT  S ++ K LP +C++LF A+Y + +        +S +   P GSK+
Subjt:  WPPPLN-LRTISDWRTFNFLMDLWTFGGLPIRGRFYEEVIPSFEELTG-SNNQAKHLPKSCEHLFHAFYCLTLQELTIPTFQS-APGLPSGSKV

TYK18070.1 hypothetical protein E5676_scaffold306G004010 [Cucumis melo var. makuwa]3.5e-1046.32Show/hide
Query:  WPPPLN-LRTISDWRTFNFLMDLWTFGGLPIRGRFYEEVIPSFEELTG-SNNQAKHLPKSCEHLFHAFYCL--TLQELTIPTFQSAPGLPSGSKV
        W P  N L T++   + + L DLW+FGGLPI+G FYEE IPSF+ELT  S ++ K LP +C++LF A+Y +  T +E   P  +S   L  GSK+
Subjt:  WPPPLN-LRTISDWRTFNFLMDLWTFGGLPIRGRFYEEVIPSFEELTG-SNNQAKHLPKSCEHLFHAFYCL--TLQELTIPTFQSAPGLPSGSKV

TrEMBL top hitse value%identityAlignment
A0A5A7T019 PMD domain-containing protein3.8e-1043.62Show/hide
Query:  WPPPLN-LRTISDWRTFNFLMDLWTFGGLPIRGRFYEEVIPSFEELTG-SNNQAKHLPKSCEHLFHAFYCL-TLQELTIPTFQSAPGLPSGSKV
        W P  N L T++   + + L DLW+FGGLPI+G FYEE IPSF+ELT  S ++ K LP +C++LF A+Y + T ++    +   +   P GSK+
Subjt:  WPPPLN-LRTISDWRTFNFLMDLWTFGGLPIRGRFYEEVIPSFEELTG-SNNQAKHLPKSCEHLFHAFYCL-TLQELTIPTFQSAPGLPSGSKV

A0A5A7TJH3 PMD domain-containing protein1.7e-1046.32Show/hide
Query:  WPPPLN-LRTISDWRTFNFLMDLWTFGGLPIRGRFYEEVIPSFEELTG-SNNQAKHLPKSCEHLFHAFYCL--TLQELTIPTFQSAPGLPSGSKV
        W P  N L T++   + + L DLW+FGGLPI+G FYEE IPSF+ELT  S ++ K LP +C++LF A+Y +  T +E   P  +S   L  GSK+
Subjt:  WPPPLN-LRTISDWRTFNFLMDLWTFGGLPIRGRFYEEVIPSFEELTG-SNNQAKHLPKSCEHLFHAFYCL--TLQELTIPTFQSAPGLPSGSKV

A0A5A7TYW3 Uncharacterized protein3.1e-1233.11Show/hide
Query:  YLVLLKDNNQPIRSGLSFLVEEPKTGRLAAQWP--------PPLNL-------RTISDWRTFN--------------------------------FLMDL
        +LV+L D NQP   GL+ +VE+P  G  A  WP        P L++       ++ + W T                                  +  DL
Subjt:  YLVLLKDNNQPIRSGLSFLVEEPKTGRLAAQWP--------PPLNL-------RTISDWRTFN--------------------------------FLMDL

Query:  WTFGGLPIRGRFYEEVIPSFEELTGS-NNQAKHLPKSCEHLFHAFYCL
        W+FGGLPI+G FYEE IPSF+ELT +  ++ K LP +C++LF A+Y +
Subjt:  WTFGGLPIRGRFYEEVIPSFEELTGS-NNQAKHLPKSCEHLFHAFYCL

A0A5A7V4F4 PMD domain-containing protein6.5e-1043.62Show/hide
Query:  WPPPLN-LRTISDWRTFNFLMDLWTFGGLPIRGRFYEEVIPSFEELTG-SNNQAKHLPKSCEHLFHAFYCLTLQELTIPTFQS-APGLPSGSKV
        W P  N L T++   + + L DLW+FGGLPI+G FYEE IPSF+ELT  S ++ K LP +C++LF A+Y + +        +S +   P GSK+
Subjt:  WPPPLN-LRTISDWRTFNFLMDLWTFGGLPIRGRFYEEVIPSFEELTG-SNNQAKHLPKSCEHLFHAFYCLTLQELTIPTFQS-APGLPSGSKV

A0A5D3D2X6 PMD domain-containing protein1.7e-1046.32Show/hide
Query:  WPPPLN-LRTISDWRTFNFLMDLWTFGGLPIRGRFYEEVIPSFEELTG-SNNQAKHLPKSCEHLFHAFYCL--TLQELTIPTFQSAPGLPSGSKV
        W P  N L T++   + + L DLW+FGGLPI+G FYEE IPSF+ELT  S ++ K LP +C++LF A+Y +  T +E   P  +S   L  GSK+
Subjt:  WPPPLN-LRTISDWRTFNFLMDLWTFGGLPIRGRFYEEVIPSFEELTG-SNNQAKHLPKSCEHLFHAFYCL--TLQELTIPTFQSAPGLPSGSKV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCCTGACTTTGGGACATGTTCCTTGGACTTGTACCGCCGCCACGCTTTTCAGCATGAGTACATGGACATGTTCCTTGGACTTGTGCCGTCGCCCCGTCATTCAGCA
TGAGTACAAGGACATAACACATTGTTCTGAAAAGACTTACCTCGTTCTCCTGAAAGACAACAATCAACCCATAAGAAGCGGACTCAGCTTCTTAGTAGAAGAGCCTAAGA
CTGGACGTCTTGCAGCCCAATGGCCCCCACCACTAAATTTGCGTACCATTTCTGATTGGAGAACTTTCAATTTCCTTATGGACCTTTGGACATTTGGGGGTCTGCCCATC
AGAGGTAGATTTTATGAGGAAGTAATCCCTAGCTTTGAAGAGTTAACTGGGTCCAACAACCAGGCAAAACATCTTCCAAAAAGCTGCGAACACCTTTTCCATGCATTCTA
TTGCTTAACGCTTCAAGAACTGACCATTCCCACGTTCCAATCAGCTCCTGGACTTCCTTCTGGTTCAAAGGTGAACAGATGTACGCAAAGCCTCCTCAACGAAGACCCAA
GAAGACCTCTCGCCCTAGCACGACTCATAACCCAGACGACACAAATATCAAGTGTCACGAGTGGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGTTCCTGACTTTGGGACATGTTCCTTGGACTTGTACCGCCGCCACGCTTTTCAGCATGAGTACATGGACATGTTCCTTGGACTTGTGCCGTCGCCCCGTCATTCAGCA
TGAGTACAAGGACATAACACATTGTTCTGAAAAGACTTACCTCGTTCTCCTGAAAGACAACAATCAACCCATAAGAAGCGGACTCAGCTTCTTAGTAGAAGAGCCTAAGA
CTGGACGTCTTGCAGCCCAATGGCCCCCACCACTAAATTTGCGTACCATTTCTGATTGGAGAACTTTCAATTTCCTTATGGACCTTTGGACATTTGGGGGTCTGCCCATC
AGAGGTAGATTTTATGAGGAAGTAATCCCTAGCTTTGAAGAGTTAACTGGGTCCAACAACCAGGCAAAACATCTTCCAAAAAGCTGCGAACACCTTTTCCATGCATTCTA
TTGCTTAACGCTTCAAGAACTGACCATTCCCACGTTCCAATCAGCTCCTGGACTTCCTTCTGGTTCAAAGGTGAACAGATGTACGCAAAGCCTCCTCAACGAAGACCCAA
GAAGACCTCTCGCCCTAGCACGACTCATAACCCAGACGACACAAATATCAAGTGTCACGAGTGGTTAG
Protein sequenceShow/hide protein sequence
MFLTLGHVPWTCTAATLFSMSTWTCSLDLCRRPVIQHEYKDITHCSEKTYLVLLKDNNQPIRSGLSFLVEEPKTGRLAAQWPPPLNLRTISDWRTFNFLMDLWTFGGLPI
RGRFYEEVIPSFEELTGSNNQAKHLPKSCEHLFHAFYCLTLQELTIPTFQSAPGLPSGSKVNRCTQSLLNEDPRRPLALARLITQTTQISSVTSG