; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0022668 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0022668
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReplication-associated protein
Genome locationchr7:35312723..35315171
RNA-Seq ExpressionLag0022668
SyntenyLag0022668
Gene Ontology termsGO:0006259 - DNA metabolic process (biological process)
GO:0006260 - DNA replication (biological process)
GO:0016032 - viral process (biological process)
GO:0090305 - nucleic acid phosphodiester bond hydrolysis (biological process)
GO:0042025 - host cell nucleus (cellular component)
GO:0016888 - endodeoxyribonuclease activity, producing 5'-phosphomonoesters (molecular function)
GO:0046872 - metal ion binding (molecular function)
GO:0003677 - DNA binding (molecular function)
GO:0016779 - nucleotidyltransferase activity (molecular function)
GO:0005524 - ATP binding (molecular function)
GO:0005198 - structural molecule activity (molecular function)
GO:0004386 - helicase activity (molecular function)
InterPro domainsIPR022692 - Geminivirus AL1 replication-associated protein, central domain
IPR022690 - Geminivirus AL1 replication-associated protein, catalytic domain
IPR001301 - Geminivirus AL1 replication-associated protein, CLV type
IPR001191 - Geminivirus AL1, replication-associated protein
IPR000657 - Geminivirus AL3 coat protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ACY79444.1 Rep [Sweet potato leaf curl virus]1.4e-8873.61Show/hide
Query:  KKLHQDDNLHIHVLLQFEGKFKCQNERLFDLSSPTSSRQFHPNIQSAKSSSDVKAYINKDGDTIEWGTFQVDGRSSRGGHQTANDACAKALNSGSADAAL
        ++LH+D   H+HVLLQFEGKF+C N+RLFDL S T S  FHPNIQ AKSSSDVK+Y++KDGDT+EWG FQVDGRS+RGG QTANDA A+ALN+GSA+AAL
Subjt:  KKLHQDDNLHIHVLLQFEGKFKCQNERLFDLSSPTSSRQFHPNIQSAKSSSDVKAYINKDGDTIEWGTFQVDGRSSRGGHQTANDACAKALNSGSADAAL

Query:  NIIREFLPKDFIFGFHNLQSNLERIFAKPQTPYESRFCPNSFTRVPRVILDWAAKNVCDSAARPDRPISIIIEGPSRVGKTVWARSLGKHNYLCGHLDLS
         IIRE LP+DFIF FHNL+SNL+RIF+ P + Y S F  +SF  VP +I DWAA+NV D+AARPDRPISI+IEGPSR+GKTVWARSLG HNYLCGHLDLS
Subjt:  NIIREFLPKDFIFGFHNLQSNLERIFAKPQTPYESRFCPNSFTRVPRVILDWAAKNVCDSAARPDRPISIIIEGPSRVGKTVWARSLGKHNYLCGHLDLS

Query:  GKVYTNDAWYNVIDDV
         KVY+N AWYNVIDDV
Subjt:  GKVYTNDAWYNVIDDV

ACY79456.1 Rep [Sweet potato leaf curl virus]5.5e-8871.3Show/hide
Query:  KKLHQDDNLHIHVLLQFEGKFKCQNERLFDLSSPTSSRQFHPNIQSAKSSSDVKAYINKDGDTIEWGTFQVDGRSSRGGHQTANDACAKALNSGSADAAL
        ++LH+D   H+HVLLQFEGKF+C+N+R FDL SPT S  FHPNIQ AKSSSDVK+Y++KDGDTIEWG FQ+DGRS+RGG QTANDA A+ALN+GS +AAL
Subjt:  KKLHQDDNLHIHVLLQFEGKFKCQNERLFDLSSPTSSRQFHPNIQSAKSSSDVKAYINKDGDTIEWGTFQVDGRSSRGGHQTANDACAKALNSGSADAAL

Query:  NIIREFLPKDFIFGFHNLQSNLERIFAKPQTPYESRFCPNSFTRVPRVILDWAAKNVCDSAARPDRPISIIIEGPSRVGKTVWARSLGKHNYLCGHLDLS
        N+I+E  PKDF+  FHN+ SNL+RIF+ P + Y S F  +S+  VP +I DWAA+NV DSAARPDRPISI+IEGPSR+GKTVWARSLG HNYLCGHLDLS
Subjt:  NIIREFLPKDFIFGFHNLQSNLERIFAKPQTPYESRFCPNSFTRVPRVILDWAAKNVCDSAARPDRPISIIIEGPSRVGKTVWARSLGKHNYLCGHLDLS

Query:  GKVYTNDAWYNVIDDV
         KVY+N AWYNVIDDV
Subjt:  GKVYTNDAWYNVIDDV

AFO66451.1 replication-associated protein [Sweet potato mosaic virus-[ZA:WP:2011]]2.7e-8766.53Show/hide
Query:  PHCKDDNGQLQLNPLSDQSP---------KKLHQDDNLHIHVLLQFEGKFKCQNERLFDLSSPTSSRQFHPNIQSAKSSSDVKAYINKDGDTIEWGTFQV
        PHC     ++       Q+P         ++LH+D   HIHVLLQFEGKF C N+RLFDL SPT S  FHPNIQ AKSSSDVK+Y++KDGDT+ WG FQ+
Subjt:  PHCKDDNGQLQLNPLSDQSP---------KKLHQDDNLHIHVLLQFEGKFKCQNERLFDLSSPTSSRQFHPNIQSAKSSSDVKAYINKDGDTIEWGTFQV

Query:  DGRSSRGGHQTANDACAKALNSGSADAALNIIREFLPKDFIFGFHNLQSNLERIFAKPQTPYESRFCPNSFTRVPRVILDWAAKNVCDSAARPDRPISII
        DGRS+RGG QTANDA A+ALNSGS +AAL IIRE LP+ FIF +HNL SNL+RIF+ P + Y S F  +SF  VP +I DWAA+NV DSAARPDRPISI+
Subjt:  DGRSSRGGHQTANDACAKALNSGSADAALNIIREFLPKDFIFGFHNLQSNLERIFAKPQTPYESRFCPNSFTRVPRVILDWAAKNVCDSAARPDRPISII

Query:  IEGPSRVGKTVWARSLGKHNYLCGHLDLSGKVYTNDAWYNVIDDV
        IEGPSR+GKTVWARSLG HNYLCGHLDLS KVY+N AWYNVIDDV
Subjt:  IEGPSRVGKTVWARSLGKHNYLCGHLDLSGKVYTNDAWYNVIDDV

AGW16213.1 replication-associated protein [Sweet potato leaf curl virus]1.6e-8766.12Show/hide
Query:  PHCKDDNGQLQLNPLSDQSP---------KKLHQDDNLHIHVLLQFEGKFKCQNERLFDLSSPTSSRQFHPNIQSAKSSSDVKAYINKDGDTIEWGTFQV
        PHC           L+ Q+P         K+LH+D   H+HVL+QFEGKF C N R FDL SPT S  FHPNIQ AKSSSDVK+Y++KDGDT+ WG FQV
Subjt:  PHCKDDNGQLQLNPLSDQSP---------KKLHQDDNLHIHVLLQFEGKFKCQNERLFDLSSPTSSRQFHPNIQSAKSSSDVKAYINKDGDTIEWGTFQV

Query:  DGRSSRGGHQTANDACAKALNSGSADAALNIIREFLPKDFIFGFHNLQSNLERIFAKPQTPYESRFCPNSFTRVPRVILDWAAKNVCDSAARPDRPISII
        DGRS+RGG QTANDA A+ALN+GS +AAL IIRE LP+ ++F FHNL SNL+RIF+ P + Y S F P+SF  VP +I DWAA+NV DSAARPDRPISI+
Subjt:  DGRSSRGGHQTANDACAKALNSGSADAALNIIREFLPKDFIFGFHNLQSNLERIFAKPQTPYESRFCPNSFTRVPRVILDWAAKNVCDSAARPDRPISII

Query:  IEGPSRVGKTVWARSLGKHNYLCGHLDLSGKVYTNDAWYNVIDDV
        IEGPSR+GKTVWARSLG HNYLCGHLDLS KVY+N AWYNVIDDV
Subjt:  IEGPSRVGKTVWARSLGKHNYLCGHLDLSGKVYTNDAWYNVIDDV

YP_009338003.1 replication-associated protein [Sweet potato mosaic virus]2.7e-8766.53Show/hide
Query:  PHCKDDNGQLQLNPLSDQSP---------KKLHQDDNLHIHVLLQFEGKFKCQNERLFDLSSPTSSRQFHPNIQSAKSSSDVKAYINKDGDTIEWGTFQV
        PHC     ++       Q+P         ++LH+D   HIHVLLQFEGKF C N+RLFDL SPT S  FHPNIQ AKSSSDVK+Y++KDGDT+ WG FQ+
Subjt:  PHCKDDNGQLQLNPLSDQSP---------KKLHQDDNLHIHVLLQFEGKFKCQNERLFDLSSPTSSRQFHPNIQSAKSSSDVKAYINKDGDTIEWGTFQV

Query:  DGRSSRGGHQTANDACAKALNSGSADAALNIIREFLPKDFIFGFHNLQSNLERIFAKPQTPYESRFCPNSFTRVPRVILDWAAKNVCDSAARPDRPISII
        DGRS+RGG QTANDA A+ALNSGS +AAL IIRE LP+ FIF +HNL SNL+RIF+ P + Y S F  +SF  VP +I DWAA+NV DSAARPDRPISI+
Subjt:  DGRSSRGGHQTANDACAKALNSGSADAALNIIREFLPKDFIFGFHNLQSNLERIFAKPQTPYESRFCPNSFTRVPRVILDWAAKNVCDSAARPDRPISII

Query:  IEGPSRVGKTVWARSLGKHNYLCGHLDLSGKVYTNDAWYNVIDDV
        IEGPSR+GKTVWARSLG HNYLCGHLDLS KVY+N AWYNVIDDV
Subjt:  IEGPSRVGKTVWARSLGKHNYLCGHLDLSGKVYTNDAWYNVIDDV

TrEMBL top hitse value%identityAlignment
A0A088BDT2 Replication-associated protein7.7e-8866.12Show/hide
Query:  PHCKDDNGQLQLNPLSDQSP---------KKLHQDDNLHIHVLLQFEGKFKCQNERLFDLSSPTSSRQFHPNIQSAKSSSDVKAYINKDGDTIEWGTFQV
        PHC           L+ Q+P         K+LH+D   H+HVL+QFEGKF C N R FDL SPT S  FHPNIQ AKSSSDVK+Y++KDGDT+ WG FQV
Subjt:  PHCKDDNGQLQLNPLSDQSP---------KKLHQDDNLHIHVLLQFEGKFKCQNERLFDLSSPTSSRQFHPNIQSAKSSSDVKAYINKDGDTIEWGTFQV

Query:  DGRSSRGGHQTANDACAKALNSGSADAALNIIREFLPKDFIFGFHNLQSNLERIFAKPQTPYESRFCPNSFTRVPRVILDWAAKNVCDSAARPDRPISII
        DGRS+RGG QTANDA A+ALN+GS +AAL IIRE LP+ ++F FHNL SNL+RIF+ P + Y S F P+SF  VP +I DWAA+NV DSAARPDRPISI+
Subjt:  DGRSSRGGHQTANDACAKALNSGSADAALNIIREFLPKDFIFGFHNLQSNLERIFAKPQTPYESRFCPNSFTRVPRVILDWAAKNVCDSAARPDRPISII

Query:  IEGPSRVGKTVWARSLGKHNYLCGHLDLSGKVYTNDAWYNVIDDV
        IEGPSR+GKTVWARSLG HNYLCGHLDLS KVY+N AWYNVIDDV
Subjt:  IEGPSRVGKTVWARSLGKHNYLCGHLDLSGKVYTNDAWYNVIDDV

A0A1L7B836 Replication-associated protein1.3e-8766.53Show/hide
Query:  PHCKDDNGQLQLNPLSDQSP---------KKLHQDDNLHIHVLLQFEGKFKCQNERLFDLSSPTSSRQFHPNIQSAKSSSDVKAYINKDGDTIEWGTFQV
        PHC     ++       Q+P         ++LH+D   HIHVLLQFEGKF C N+RLFDL SPT S  FHPNIQ AKSSSDVK+Y++KDGDT+ WG FQ+
Subjt:  PHCKDDNGQLQLNPLSDQSP---------KKLHQDDNLHIHVLLQFEGKFKCQNERLFDLSSPTSSRQFHPNIQSAKSSSDVKAYINKDGDTIEWGTFQV

Query:  DGRSSRGGHQTANDACAKALNSGSADAALNIIREFLPKDFIFGFHNLQSNLERIFAKPQTPYESRFCPNSFTRVPRVILDWAAKNVCDSAARPDRPISII
        DGRS+RGG QTANDA A+ALNSGS +AAL IIRE LP+ FIF +HNL SNL+RIF+ P + Y S F  +SF  VP +I DWAA+NV DSAARPDRPISI+
Subjt:  DGRSSRGGHQTANDACAKALNSGSADAALNIIREFLPKDFIFGFHNLQSNLERIFAKPQTPYESRFCPNSFTRVPRVILDWAAKNVCDSAARPDRPISII

Query:  IEGPSRVGKTVWARSLGKHNYLCGHLDLSGKVYTNDAWYNVIDDV
        IEGPSR+GKTVWARSLG HNYLCGHLDLS KVY+N AWYNVIDDV
Subjt:  IEGPSRVGKTVWARSLGKHNYLCGHLDLSGKVYTNDAWYNVIDDV

D4HS99 Replication-associated protein7.0e-8973.61Show/hide
Query:  KKLHQDDNLHIHVLLQFEGKFKCQNERLFDLSSPTSSRQFHPNIQSAKSSSDVKAYINKDGDTIEWGTFQVDGRSSRGGHQTANDACAKALNSGSADAAL
        ++LH+D   H+HVLLQFEGKF+C N+RLFDL S T S  FHPNIQ AKSSSDVK+Y++KDGDT+EWG FQVDGRS+RGG QTANDA A+ALN+GSA+AAL
Subjt:  KKLHQDDNLHIHVLLQFEGKFKCQNERLFDLSSPTSSRQFHPNIQSAKSSSDVKAYINKDGDTIEWGTFQVDGRSSRGGHQTANDACAKALNSGSADAAL

Query:  NIIREFLPKDFIFGFHNLQSNLERIFAKPQTPYESRFCPNSFTRVPRVILDWAAKNVCDSAARPDRPISIIIEGPSRVGKTVWARSLGKHNYLCGHLDLS
         IIRE LP+DFIF FHNL+SNL+RIF+ P + Y S F  +SF  VP +I DWAA+NV D+AARPDRPISI+IEGPSR+GKTVWARSLG HNYLCGHLDLS
Subjt:  NIIREFLPKDFIFGFHNLQSNLERIFAKPQTPYESRFCPNSFTRVPRVILDWAAKNVCDSAARPDRPISIIIEGPSRVGKTVWARSLGKHNYLCGHLDLS

Query:  GKVYTNDAWYNVIDDV
         KVY+N AWYNVIDDV
Subjt:  GKVYTNDAWYNVIDDV

D4HSB1 Replication-associated protein2.6e-8871.3Show/hide
Query:  KKLHQDDNLHIHVLLQFEGKFKCQNERLFDLSSPTSSRQFHPNIQSAKSSSDVKAYINKDGDTIEWGTFQVDGRSSRGGHQTANDACAKALNSGSADAAL
        ++LH+D   H+HVLLQFEGKF+C+N+R FDL SPT S  FHPNIQ AKSSSDVK+Y++KDGDTIEWG FQ+DGRS+RGG QTANDA A+ALN+GS +AAL
Subjt:  KKLHQDDNLHIHVLLQFEGKFKCQNERLFDLSSPTSSRQFHPNIQSAKSSSDVKAYINKDGDTIEWGTFQVDGRSSRGGHQTANDACAKALNSGSADAAL

Query:  NIIREFLPKDFIFGFHNLQSNLERIFAKPQTPYESRFCPNSFTRVPRVILDWAAKNVCDSAARPDRPISIIIEGPSRVGKTVWARSLGKHNYLCGHLDLS
        N+I+E  PKDF+  FHN+ SNL+RIF+ P + Y S F  +S+  VP +I DWAA+NV DSAARPDRPISI+IEGPSR+GKTVWARSLG HNYLCGHLDLS
Subjt:  NIIREFLPKDFIFGFHNLQSNLERIFAKPQTPYESRFCPNSFTRVPRVILDWAAKNVCDSAARPDRPISIIIEGPSRVGKTVWARSLGKHNYLCGHLDLS

Query:  GKVYTNDAWYNVIDDV
         KVY+N AWYNVIDDV
Subjt:  GKVYTNDAWYNVIDDV

I7D0Y3 Replication-associated protein1.3e-8766.53Show/hide
Query:  PHCKDDNGQLQLNPLSDQSP---------KKLHQDDNLHIHVLLQFEGKFKCQNERLFDLSSPTSSRQFHPNIQSAKSSSDVKAYINKDGDTIEWGTFQV
        PHC     ++       Q+P         ++LH+D   HIHVLLQFEGKF C N+RLFDL SPT S  FHPNIQ AKSSSDVK+Y++KDGDT+ WG FQ+
Subjt:  PHCKDDNGQLQLNPLSDQSP---------KKLHQDDNLHIHVLLQFEGKFKCQNERLFDLSSPTSSRQFHPNIQSAKSSSDVKAYINKDGDTIEWGTFQV

Query:  DGRSSRGGHQTANDACAKALNSGSADAALNIIREFLPKDFIFGFHNLQSNLERIFAKPQTPYESRFCPNSFTRVPRVILDWAAKNVCDSAARPDRPISII
        DGRS+RGG QTANDA A+ALNSGS +AAL IIRE LP+ FIF +HNL SNL+RIF+ P + Y S F  +SF  VP +I DWAA+NV DSAARPDRPISI+
Subjt:  DGRSSRGGHQTANDACAKALNSGSADAALNIIREFLPKDFIFGFHNLQSNLERIFAKPQTPYESRFCPNSFTRVPRVILDWAAKNVCDSAARPDRPISII

Query:  IEGPSRVGKTVWARSLGKHNYLCGHLDLSGKVYTNDAWYNVIDDV
        IEGPSR+GKTVWARSLG HNYLCGHLDLS KVY+N AWYNVIDDV
Subjt:  IEGPSRVGKTVWARSLGKHNYLCGHLDLSGKVYTNDAWYNVIDDV

SwissProt top hitse value%identityAlignment
P14972 Replication-associated protein7.9e-8264.76Show/hide
Query:  LQLNPLSDQSPKKLHQDDNLHIHVLLQFEGKFKCQNERLFDLSSPTSSRQFHPNIQSAKSSSDVKAYINKDGDTIEWGTFQVDGRSSRGGHQTANDACAK
        L  NP   +  ++LHQ+   H+H L+QFEGK    N RLFD   P+ S  FHPNIQ AKSSSDVK+Y++KDGDT+EWG FQ+DGRS+RGG Q+ANDA AK
Subjt:  LQLNPLSDQSPKKLHQDDNLHIHVLLQFEGKFKCQNERLFDLSSPTSSRQFHPNIQSAKSSSDVKAYINKDGDTIEWGTFQVDGRSSRGGHQTANDACAK

Query:  ALNSGSADAALNIIREFLPKDFIFGFHNLQSNLERIFAKPQTPYESRFCPNSFTRVPRVILDWAAKNVCDSAARPDRPISIIIEGPSRVGKTVWARSLGK
        ALNSGS   ALN+IRE +PKDF+  FHNL SNL+RIF +P  PY S F  +SF +VP  + +W A NV DSAARP RP SI+IEG SR GKT+WARSLG 
Subjt:  ALNSGSADAALNIIREFLPKDFIFGFHNLQSNLERIFAKPQTPYESRFCPNSFTRVPRVILDWAAKNVCDSAARPDRPISIIIEGPSRVGKTVWARSLGK

Query:  HNYLCGHLDLSGKVYTNDAWYNVIDDV
        HNYLCGHLDLS KV+ NDAWYNVIDDV
Subjt:  HNYLCGHLDLSGKVYTNDAWYNVIDDV

P14982 Replication-associated protein1.0e-8165.2Show/hide
Query:  LQLNPLSDQSPKKLHQDDNLHIHVLLQFEGKFKCQNERLFDLSSPTSSRQFHPNIQSAKSSSDVKAYINKDGDTIEWGTFQVDGRSSRGGHQTANDACAK
        LQ NP   +  ++LHQ+   H+H L+QFEGK    N RLFD   P+ S  FHPNIQ AKSSSDVK+Y++KDGDT+EWG FQ+DGRS+RGG Q+ANDA AK
Subjt:  LQLNPLSDQSPKKLHQDDNLHIHVLLQFEGKFKCQNERLFDLSSPTSSRQFHPNIQSAKSSSDVKAYINKDGDTIEWGTFQVDGRSSRGGHQTANDACAK

Query:  ALNSGSADAALNIIREFLPKDFIFGFHNLQSNLERIFAKPQTPYESRFCPNSFTRVPRVILDWAAKNVCDSAARPDRPISIIIEGPSRVGKTVWARSLGK
        ALNSGS   ALN+IRE +PKDF+  FHNL SNL+RIF +P  PY S F  +SF +VP  I +W A NV DSAARP RP SI+IEG SR GKT+WARSLG 
Subjt:  ALNSGSADAALNIIREFLPKDFIFGFHNLQSNLERIFAKPQTPYESRFCPNSFTRVPRVILDWAAKNVCDSAARPDRPISIIIEGPSRVGKTVWARSLGK

Query:  HNYLCGHLDLSGKVYTNDAWYNVIDDV
        HNYLCGHLDLS KV+ N AWYNVIDDV
Subjt:  HNYLCGHLDLSGKVYTNDAWYNVIDDV

P27260 Replication-associated protein2.1e-8261.3Show/hide
Query:  NGQLQLNPLSDQSPKKLHQDDNLHIHVLLQFEGKFKCQNERLFDLSSPTSSRQFHPNIQSAKSSSDVKAYINKDGDTIEWGTFQVDGRSSRGGHQTANDA
        N Q   N L  +  ++LH++   H+H+L+QFEGK+ C N+R FDL SPT S  FHPNIQ AKSSSDVK+YI+KDGD +EWGTFQ+DGRS+RGG QTANDA
Subjt:  NGQLQLNPLSDQSPKKLHQDDNLHIHVLLQFEGKFKCQNERLFDLSSPTSSRQFHPNIQSAKSSSDVKAYINKDGDTIEWGTFQVDGRSSRGGHQTANDA

Query:  CAKALNSGSADAALNIIREFLPKDFIFGFHNLQSNLERIFAKPQTPYESRFCPNSFTRVPRVILDWAAKNVCDSAARPDRPISIIIEGPSRVGKTVWARS
         AKA+N+GS   AL++I+E  P+D++  FHN+ SNL+++F  P  PY S F  +SF +VP  +  W ++NV D+AARP RP+SI+IEG SR GKT WARS
Subjt:  CAKALNSGSADAALNIIREFLPKDFIFGFHNLQSNLERIFAKPQTPYESRFCPNSFTRVPRVILDWAAKNVCDSAARPDRPISIIIEGPSRVGKTVWARS

Query:  LGKHNYLCGHLDLSGKVYTNDAWYNVIDDV
        LG HNYLCGHLDLS KVY+N+AWYNVIDDV
Subjt:  LGKHNYLCGHLDLSGKVYTNDAWYNVIDDV

P36279 Replication-associated protein4.5e-8565.24Show/hide
Query:  QLNPLSDQSPKK-------LHQDDNLHIHVLLQFEGKFKCQNERLFDLSSPTSSRQFHPNIQSAKSSSDVKAYINKDGDTIEWGTFQVDGRSSRGGHQTA
        QLN L   + KK       LH++   H+HVL+QFEGKF+C+N+R FDL SPT S  FHPNIQ AKSSSDVK+Y+ KDGDT+EWG FQ+DGRS+RGG Q+A
Subjt:  QLNPLSDQSPKK-------LHQDDNLHIHVLLQFEGKFKCQNERLFDLSSPTSSRQFHPNIQSAKSSSDVKAYINKDGDTIEWGTFQVDGRSSRGGHQTA

Query:  NDACAKALNSGSADAALNIIREFLPKDFIFGFHNLQSNLERIFAKPQTPYESRFCPNSFTRVPRVILDWAAKNVCDSAARPDRPISIIIEGPSRVGKTVW
        NDA A+ALN+GS   ALN++RE  PKD++  FHNL SNL+RIF  P   Y S F  +SF RVP  + +W A+NV D+AARP RPISI+IEG SR GKTVW
Subjt:  NDACAKALNSGSADAALNIIREFLPKDFIFGFHNLQSNLERIFAKPQTPYESRFCPNSFTRVPRVILDWAAKNVCDSAARPDRPISIIIEGPSRVGKTVW

Query:  ARSLGKHNYLCGHLDLSGKVYTNDAWYNVIDDV
        ARSLG HNYLCGHLDLS KVY+NDAWYNVIDDV
Subjt:  ARSLGKHNYLCGHLDLSGKVYTNDAWYNVIDDV

P38609 Replication-associated protein3.2e-8365.28Show/hide
Query:  KKLHQDDNLHIHVLLQFEGKFKCQNERLFDLSSPTSSRQFHPNIQSAKSSSDVKAYINKDGDTIEWGTFQVDGRSSRGGHQTANDACAKALNSGSADAAL
        ++LH+D   H+H+L+QFEGKF C+N R FDL SPT S  FHPNIQ AKSSSDVK+YI+KDGD +EWGTFQ+DGRS+RGG QTANDA AKA+N+GS   AL
Subjt:  KKLHQDDNLHIHVLLQFEGKFKCQNERLFDLSSPTSSRQFHPNIQSAKSSSDVKAYINKDGDTIEWGTFQVDGRSSRGGHQTANDACAKALNSGSADAAL

Query:  NIIREFLPKDFIFGFHNLQSNLERIFAKPQTPYESRFCPNSFTRVPRVILDWAAKNVCDSAARPDRPISIIIEGPSRVGKTVWARSLGKHNYLCGHLDLS
        ++I+E  P+D+I  FHN+ SNL+R+F  P  PY S F  +SF +VP  +  W ++NV D+AARP RP+SI+IEG SR GKT+WARSLG HNYLCGHLDLS
Subjt:  NIIREFLPKDFIFGFHNLQSNLERIFAKPQTPYESRFCPNSFTRVPRVILDWAAKNVCDSAARPDRPISIIIEGPSRVGKTVWARSLGKHNYLCGHLDLS

Query:  GKVYTNDAWYNVIDDV
         KVY+N+AWYNVIDDV
Subjt:  GKVYTNDAWYNVIDDV

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAATGGGATTCACGCACCGGGGAAGACATAACTGCATGTCAGCTGGAGAATGACGTTTTTATCTGGGAAACCCCAAATCCCCTGTATTTCAAGATGGTTTCACACAC
GACGCGACCGTTCCAGACACAGCACGACATAATCGAACTGGAGATTCGATTCAATCACAACCTTCGGAGGGCTTTGGGGATTCACAAATGTTTCATAACCTTGAAGATCT
TAACTCGCTTACGACCTCCGACAGGGCTTTTCTTGCGAGTCTTTAAATTTCAATCGTGCCTAACGCGTAAAACCTTGATAACAACGCCTCTTATTGATAGCACGGTGACT
ACCATTCACCTTTACATACTAACGTGCAAAGTCGGACATACACAGAAAGGTCCCCGTGTGTACTACATCGTTTCGGGCTTCATAAGACTGGACCGTGAACGATCCCTCGC
ATCATATGGGAATGTCCGACGTTCGACGTTCCTGGTAATCAATACGTTTACGGTAGGCCGGGATTCGCTTCCACAATTACCCGCCTATGTCTTGGGCAGTGGGGACAGGC
ACAGACAGCAACAGTTGGACGTTGAAGATCTACATCCGTCGCACCATCCCGACGAATGCTGTACGCGGTTAATCTACAAGTTGCCTCATTGTAAAGACGACAACGGACAA
CTGCAATTAAATCCCTTATCAGATCAAAGCCCAAAGAAATTGCATCAAGACGACAATCTGCACATTCACGTCCTTCTGCAGTTTGAAGGGAAGTTCAAATGTCAGAACGA
ACGCCTCTTCGACCTCAGTTCCCCAACCTCGTCGCGACAGTTCCATCCGAACATACAAAGTGCAAAGTCTAGTTCCGATGTCAAAGCCTACATCAACAAGGACGGGGATA
CGATCGAATGGGGAACGTTTCAGGTGGACGGAAGAAGTTCTCGCGGAGGTCATCAAACCGCTAACGACGCTTGTGCAAAAGCTCTGAATTCTGGATCGGCTGATGCGGCG
TTAAACATTATCAGAGAGTTTCTTCCGAAGGATTTCATTTTCGGTTTTCACAATCTACAATCAAACTTGGAAAGAATTTTTGCAAAACCACAAACGCCGTATGAATCCAG
ATTTTGTCCAAATTCGTTCACTAGGGTGCCTCGTGTAATCTTGGACTGGGCCGCGAAGAACGTCTGTGATTCCGCTGCGCGGCCGGATAGACCCATAAGTATAATCATAG
AGGGACCAAGCAGAGTAGGCAAAACAGTTTGGGCACGATCATTGGGTAAACATAATTACTTATGTGGCCATTTGGATTTGAGCGGTAAAGTATATACTAATGACGCATGG
TACAACGTGATAGATGACGTGGGAGGGTGGGCAGTGTTATGA
mRNA sequenceShow/hide mRNA sequence
ATGGAATGGGATTCACGCACCGGGGAAGACATAACTGCATGTCAGCTGGAGAATGACGTTTTTATCTGGGAAACCCCAAATCCCCTGTATTTCAAGATGGTTTCACACAC
GACGCGACCGTTCCAGACACAGCACGACATAATCGAACTGGAGATTCGATTCAATCACAACCTTCGGAGGGCTTTGGGGATTCACAAATGTTTCATAACCTTGAAGATCT
TAACTCGCTTACGACCTCCGACAGGGCTTTTCTTGCGAGTCTTTAAATTTCAATCGTGCCTAACGCGTAAAACCTTGATAACAACGCCTCTTATTGATAGCACGGTGACT
ACCATTCACCTTTACATACTAACGTGCAAAGTCGGACATACACAGAAAGGTCCCCGTGTGTACTACATCGTTTCGGGCTTCATAAGACTGGACCGTGAACGATCCCTCGC
ATCATATGGGAATGTCCGACGTTCGACGTTCCTGGTAATCAATACGTTTACGGTAGGCCGGGATTCGCTTCCACAATTACCCGCCTATGTCTTGGGCAGTGGGGACAGGC
ACAGACAGCAACAGTTGGACGTTGAAGATCTACATCCGTCGCACCATCCCGACGAATGCTGTACGCGGTTAATCTACAAGTTGCCTCATTGTAAAGACGACAACGGACAA
CTGCAATTAAATCCCTTATCAGATCAAAGCCCAAAGAAATTGCATCAAGACGACAATCTGCACATTCACGTCCTTCTGCAGTTTGAAGGGAAGTTCAAATGTCAGAACGA
ACGCCTCTTCGACCTCAGTTCCCCAACCTCGTCGCGACAGTTCCATCCGAACATACAAAGTGCAAAGTCTAGTTCCGATGTCAAAGCCTACATCAACAAGGACGGGGATA
CGATCGAATGGGGAACGTTTCAGGTGGACGGAAGAAGTTCTCGCGGAGGTCATCAAACCGCTAACGACGCTTGTGCAAAAGCTCTGAATTCTGGATCGGCTGATGCGGCG
TTAAACATTATCAGAGAGTTTCTTCCGAAGGATTTCATTTTCGGTTTTCACAATCTACAATCAAACTTGGAAAGAATTTTTGCAAAACCACAAACGCCGTATGAATCCAG
ATTTTGTCCAAATTCGTTCACTAGGGTGCCTCGTGTAATCTTGGACTGGGCCGCGAAGAACGTCTGTGATTCCGCTGCGCGGCCGGATAGACCCATAAGTATAATCATAG
AGGGACCAAGCAGAGTAGGCAAAACAGTTTGGGCACGATCATTGGGTAAACATAATTACTTATGTGGCCATTTGGATTTGAGCGGTAAAGTATATACTAATGACGCATGG
TACAACGTGATAGATGACGTGGGAGGGTGGGCAGTGTTATGA
Protein sequenceShow/hide protein sequence
MEWDSRTGEDITACQLENDVFIWETPNPLYFKMVSHTTRPFQTQHDIIELEIRFNHNLRRALGIHKCFITLKILTRLRPPTGLFLRVFKFQSCLTRKTLITTPLIDSTVT
TIHLYILTCKVGHTQKGPRVYYIVSGFIRLDRERSLASYGNVRRSTFLVINTFTVGRDSLPQLPAYVLGSGDRHRQQQLDVEDLHPSHHPDECCTRLIYKLPHCKDDNGQ
LQLNPLSDQSPKKLHQDDNLHIHVLLQFEGKFKCQNERLFDLSSPTSSRQFHPNIQSAKSSSDVKAYINKDGDTIEWGTFQVDGRSSRGGHQTANDACAKALNSGSADAA
LNIIREFLPKDFIFGFHNLQSNLERIFAKPQTPYESRFCPNSFTRVPRVILDWAAKNVCDSAARPDRPISIIIEGPSRVGKTVWARSLGKHNYLCGHLDLSGKVYTNDAW
YNVIDDVGGWAVL