; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0022679 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0022679
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionHistidine--tRNA ligase
Genome locationchr7:35456191..35457825
RNA-Seq ExpressionLag0022679
SyntenyLag0022679
Gene Ontology termsGO:0006427 - histidyl-tRNA aminoacylation (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0004821 - histidine-tRNA ligase activity (molecular function)
GO:0005524 - ATP binding (molecular function)
InterPro domainsIPR004516 - Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6604395.1 Histidine--tRNA ligase, chloroplastic/mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]2.6e-4786.84Show/hide
Query:  DVGFKVSSRKVLQEVLKCYGIPENLFGKVCIFIDKVKKIPLDEMKKELKVVGVSEEAIEELLKVLSVKFLTKLEEILGGGGEALSDLKQLFSLTEKFGYV
        DVGFKVSSRKVLQEVLKCYGIPEN+FGKVCI IDK++KIPLDEMKKELKVVGVSE+AIEE+L+VLSVK LTKLEEILGGGGEA+SDLKQLFSL EKFGY 
Subjt:  DVGFKVSSRKVLQEVLKCYGIPENLFGKVCIFIDKVKKIPLDEMKKELKVVGVSEEAIEELLKVLSVKFLTKLEEILGGGGEALSDLKQLFSLTEKFGYV

Query:  DWVKFDASFVCGLA
        DW++FDAS V GLA
Subjt:  DWVKFDASFVCGLA

KAG7034545.1 Histidine--tRNA ligase, chloroplastic/mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma]2.6e-4786.84Show/hide
Query:  DVGFKVSSRKVLQEVLKCYGIPENLFGKVCIFIDKVKKIPLDEMKKELKVVGVSEEAIEELLKVLSVKFLTKLEEILGGGGEALSDLKQLFSLTEKFGYV
        DVGFKVSSRKVLQEVLKCYGIPEN+FGKVCI IDK++KIPLDEMKKELKVVGVSE+AIEE+L+VLSVK LTKLEEILGGGGEA+SDLKQLFSL EKFGY 
Subjt:  DVGFKVSSRKVLQEVLKCYGIPENLFGKVCIFIDKVKKIPLDEMKKELKVVGVSEEAIEELLKVLSVKFLTKLEEILGGGGEALSDLKQLFSLTEKFGYV

Query:  DWVKFDASFVCGLA
        DW++FDAS V GLA
Subjt:  DWVKFDASFVCGLA

XP_022978407.1 histidine--tRNA ligase, chloroplastic/mitochondrial isoform X2 [Cucurbita maxima]2.6e-4786.84Show/hide
Query:  DVGFKVSSRKVLQEVLKCYGIPENLFGKVCIFIDKVKKIPLDEMKKELKVVGVSEEAIEELLKVLSVKFLTKLEEILGGGGEALSDLKQLFSLTEKFGYV
        DVGFKVSSRKVLQEVLKCYGIPEN+FGKVCI IDK++KIPLDEMKKELKVVGVSE+AIEE+L+VLSVK LTKLEEILGGGGEA+SDLKQLFSL EKFGY 
Subjt:  DVGFKVSSRKVLQEVLKCYGIPENLFGKVCIFIDKVKKIPLDEMKKELKVVGVSEEAIEELLKVLSVKFLTKLEEILGGGGEALSDLKQLFSLTEKFGYV

Query:  DWVKFDASFVCGLA
        DW++FDAS V GLA
Subjt:  DWVKFDASFVCGLA

XP_023544232.1 histidine--tRNA ligase, chloroplastic/mitochondrial isoform X1 [Cucurbita pepo subsp. pepo]2.6e-4786.84Show/hide
Query:  DVGFKVSSRKVLQEVLKCYGIPENLFGKVCIFIDKVKKIPLDEMKKELKVVGVSEEAIEELLKVLSVKFLTKLEEILGGGGEALSDLKQLFSLTEKFGYV
        DVGFKVSSRKVLQEVLKCYGIPEN+FGKVCI IDK++KIPLDEMKKELKVVGVSE+AIEE+L+VLSVK LTKLEEILGGGGEA+SDLKQLFSL EKFGY 
Subjt:  DVGFKVSSRKVLQEVLKCYGIPENLFGKVCIFIDKVKKIPLDEMKKELKVVGVSEEAIEELLKVLSVKFLTKLEEILGGGGEALSDLKQLFSLTEKFGYV

Query:  DWVKFDASFVCGLA
        DW++FDAS V GLA
Subjt:  DWVKFDASFVCGLA

XP_023544233.1 histidine--tRNA ligase, chloroplastic/mitochondrial isoform X2 [Cucurbita pepo subsp. pepo]2.6e-4786.84Show/hide
Query:  DVGFKVSSRKVLQEVLKCYGIPENLFGKVCIFIDKVKKIPLDEMKKELKVVGVSEEAIEELLKVLSVKFLTKLEEILGGGGEALSDLKQLFSLTEKFGYV
        DVGFKVSSRKVLQEVLKCYGIPEN+FGKVCI IDK++KIPLDEMKKELKVVGVSE+AIEE+L+VLSVK LTKLEEILGGGGEA+SDLKQLFSL EKFGY 
Subjt:  DVGFKVSSRKVLQEVLKCYGIPENLFGKVCIFIDKVKKIPLDEMKKELKVVGVSEEAIEELLKVLSVKFLTKLEEILGGGGEALSDLKQLFSLTEKFGYV

Query:  DWVKFDASFVCGLA
        DW++FDAS V GLA
Subjt:  DWVKFDASFVCGLA

TrEMBL top hitse value%identityAlignment
A0A5D3C5Z0 Histidine--tRNA ligase2.8e-4785.96Show/hide
Query:  DVGFKVSSRKVLQEVLKCYGIPENLFGKVCIFIDKVKKIPLDEMKKELKVVGVSEEAIEELLKVLSVKFLTKLEEILGGGGEALSDLKQLFSLTEKFGYV
        DVGFKVSSRKVLQ+VLKCYGIP+N+FGKVCI IDK++KIPLDEMKKELKVVGVSE+AIEELL+VLSVK LTKLEE+LGGGGEALSDLKQLFSL EKFGY 
Subjt:  DVGFKVSSRKVLQEVLKCYGIPENLFGKVCIFIDKVKKIPLDEMKKELKVVGVSEEAIEELLKVLSVKFLTKLEEILGGGGEALSDLKQLFSLTEKFGYV

Query:  DWVKFDASFVCGLA
        DW++FDAS V GLA
Subjt:  DWVKFDASFVCGLA

A0A6J1ECF7 Histidine--tRNA ligase1.3e-4786.84Show/hide
Query:  DVGFKVSSRKVLQEVLKCYGIPENLFGKVCIFIDKVKKIPLDEMKKELKVVGVSEEAIEELLKVLSVKFLTKLEEILGGGGEALSDLKQLFSLTEKFGYV
        DVGFKVSSRKVLQEVLKCYGIPEN+FGKVCI IDK++KIPLDEMKKELKVVGVSE+AIEE+L+VLSVK LTKLEEILGGGGEA+SDLKQLFSL EKFGY 
Subjt:  DVGFKVSSRKVLQEVLKCYGIPENLFGKVCIFIDKVKKIPLDEMKKELKVVGVSEEAIEELLKVLSVKFLTKLEEILGGGGEALSDLKQLFSLTEKFGYV

Query:  DWVKFDASFVCGLA
        DW++FDAS V GLA
Subjt:  DWVKFDASFVCGLA

A0A6J1EG18 Histidine--tRNA ligase1.3e-4786.84Show/hide
Query:  DVGFKVSSRKVLQEVLKCYGIPENLFGKVCIFIDKVKKIPLDEMKKELKVVGVSEEAIEELLKVLSVKFLTKLEEILGGGGEALSDLKQLFSLTEKFGYV
        DVGFKVSSRKVLQEVLKCYGIPEN+FGKVCI IDK++KIPLDEMKKELKVVGVSE+AIEE+L+VLSVK LTKLEEILGGGGEA+SDLKQLFSL EKFGY 
Subjt:  DVGFKVSSRKVLQEVLKCYGIPENLFGKVCIFIDKVKKIPLDEMKKELKVVGVSEEAIEELLKVLSVKFLTKLEEILGGGGEALSDLKQLFSLTEKFGYV

Query:  DWVKFDASFVCGLA
        DW++FDAS V GLA
Subjt:  DWVKFDASFVCGLA

A0A6J1IL10 Histidine--tRNA ligase1.3e-4786.84Show/hide
Query:  DVGFKVSSRKVLQEVLKCYGIPENLFGKVCIFIDKVKKIPLDEMKKELKVVGVSEEAIEELLKVLSVKFLTKLEEILGGGGEALSDLKQLFSLTEKFGYV
        DVGFKVSSRKVLQEVLKCYGIPEN+FGKVCI IDK++KIPLDEMKKELKVVGVSE+AIEE+L+VLSVK LTKLEEILGGGGEA+SDLKQLFSL EKFGY 
Subjt:  DVGFKVSSRKVLQEVLKCYGIPENLFGKVCIFIDKVKKIPLDEMKKELKVVGVSEEAIEELLKVLSVKFLTKLEEILGGGGEALSDLKQLFSLTEKFGYV

Query:  DWVKFDASFVCGLA
        DW++FDAS V GLA
Subjt:  DWVKFDASFVCGLA

A0A6J1IMK6 Histidine--tRNA ligase1.3e-4786.84Show/hide
Query:  DVGFKVSSRKVLQEVLKCYGIPENLFGKVCIFIDKVKKIPLDEMKKELKVVGVSEEAIEELLKVLSVKFLTKLEEILGGGGEALSDLKQLFSLTEKFGYV
        DVGFKVSSRKVLQEVLKCYGIPEN+FGKVCI IDK++KIPLDEMKKELKVVGVSE+AIEE+L+VLSVK LTKLEEILGGGGEA+SDLKQLFSL EKFGY 
Subjt:  DVGFKVSSRKVLQEVLKCYGIPENLFGKVCIFIDKVKKIPLDEMKKELKVVGVSEEAIEELLKVLSVKFLTKLEEILGGGGEALSDLKQLFSLTEKFGYV

Query:  DWVKFDASFVCGLA
        DW++FDAS V GLA
Subjt:  DWVKFDASFVCGLA

SwissProt top hitse value%identityAlignment
E9QI36 Histidine--tRNA ligase8.0e-0729.45Show/hide
Query:  LELVFTTLFPKPVGPWRTICSVPDVGFKVSSRKVLQEVLKCYGIPENLFGKVCIFIDKVKKIPLDEMKKEL-KVVGVSEEAIEELLKVLSVKFLTKLEEI
        L+LV+  L    +G +R          KV+ R++L  +    G+P+  F  +C  +DK+ K+  +E+KKE+    G+SEE  + +   +S++    L E 
Subjt:  LELVFTTLFPKPVGPWRTICSVPDVGFKVSSRKVLQEVLKCYGIPENLFGKVCIFIDKVKKIPLDEMKKEL-KVVGVSEEAIEELLKVLSVKFLTKLEEI

Query:  L---------GGGGEALSDLKQLFSLTEKFGYVDWVKFDASFVCGL
        L               ++D+K LFS  E F   D V FD S   GL
Subjt:  L---------GGGGEALSDLKQLFSLTEKFGYVDWVKFDASFVCGL

O43011 Histidine--tRNA ligase, mitochondrial4.0e-0628.57Show/hide
Query:  KVSSRKVLQEVLKCYGIPENLFGKVCIFIDKVKKIPLDEMKKELKV-VGVSEEAIEELLKVLSVK----FLTKLE--EILGGGGEAL---SDLKQLFSLT
        K++ RK+L  +    G+P++    +   +DK+ K+P +++++E+ V  G+ EE  +++ + + +K     L KLE   +L     A+   +D++ LF   
Subjt:  KVSSRKVLQEVLKCYGIPENLFGKVCIFIDKVKKIPLDEMKKELKV-VGVSEEAIEELLKVLSVK----FLTKLE--EILGGGGEAL---SDLKQLFSLT

Query:  EKFGYVDWVKFDASFVCGL
        E FG +D   FD S   GL
Subjt:  EKFGYVDWVKFDASFVCGL

O82413 Histidine--tRNA ligase, chloroplastic/mitochondrial2.9e-4171.93Show/hide
Query:  DVGFKVSSRKVLQEVLKCYGIPENLFGKVCIFIDKVKKIPLDEMKKELKVVGVSEEAIEELLKVLSVKFLTKLEEILGGGGEALSDLKQLFSLTEKFGYV
        DVGFKVSSRKVLQE+LK YG+PE+LFG+VCI IDK++KIP+DE+KKEL   G+SE+AIE+LL+VLSVK L  LE+I+GG GEA++DLKQLFSL EKFGY 
Subjt:  DVGFKVSSRKVLQEVLKCYGIPENLFGKVCIFIDKVKKIPLDEMKKELKVVGVSEEAIEELLKVLSVKFLTKLEEILGGGGEALSDLKQLFSLTEKFGYV

Query:  DWVKFDASFVCGLA
        +W++FDAS V GLA
Subjt:  DWVKFDASFVCGLA

P70076 Histidine--tRNA ligase, cytoplasmic2.1e-0730.89Show/hide
Query:  DVGFKVSSRKVLQEVLKCYGIPENLFGKVCIFIDKVKKIPLDEMKKEL-KVVGVSEEAIEELLKVLSVKFLTKLEEIL---------GGGGEALSDLKQL
        D   KV+ R++L  +    G+P+N+F  +C  +DK+ K+P + +K E+    G+SEEA +++   + ++    L E L               L+D+K L
Subjt:  DVGFKVSSRKVLQEVLKCYGIPENLFGKVCIFIDKVKKIPLDEMKKEL-KVVGVSEEAIEELLKVLSVKFLTKLEEIL---------GGGGEALSDLKQL

Query:  FSLTEKFGYVDWVKFDASFVCGL
        FS  + F   D V FD S   GL
Subjt:  FSLTEKFGYVDWVKFDASFVCGL

Q86AS6 Histidine--tRNA ligase, cytoplasmic4.7e-0730.95Show/hide
Query:  VPDVGFKVSSRKVLQEVLKCYGIPENLFGKVCIFIDKVKKIPLDEMKKELKVVGVSEEAI-EELLKVLSVKF--LTKLEEILGGG--------GEALSDL
        V D   K++ RK+L  +    G+P + F  +C  +DK+ K P +E++KE+  V   + A+ +++ K +S+K   +  L+ +   G         EALS L
Subjt:  VPDVGFKVSSRKVLQEVLKCYGIPENLFGKVCIFIDKVKKIPLDEMKKELKVVGVSEEAI-EELLKVLSVKF--LTKLEEILGGG--------GEALSDL

Query:  KQLFSLTEKFGYVDWVKFDASFVCGL
        + LF   E FG    + FD S   GL
Subjt:  KQLFSLTEKFGYVDWVKFDASFVCGL

Arabidopsis top hitse value%identityAlignment
AT3G02760.1 Class II aaRS and biotin synthetases superfamily protein1.7e-0428.35Show/hide
Query:  VPDVGFKVSSRKVLQEVLKCYGIPENLFGKVCIFIDKVKKIPLDEMKKEL-KVVGVSEEAIEEL-----LKVLSVKFLTKL----EEILG--GGGEALSD
        + D   K++ RK+L  +L+  G+P   F  +C  IDK+ K   +++KKE+ +  G+S E  + +      K   ++ L+KL     E L      EAL +
Subjt:  VPDVGFKVSSRKVLQEVLKCYGIPENLFGKVCIFIDKVKKIPLDEMKKEL-KVVGVSEEAIEEL-----LKVLSVKFLTKL----EEILG--GGGEALSD

Query:  LKQLFSLTEKFGYVDWVKFDASFVCGL
        L  +F   ++    + + FD S   GL
Subjt:  LKQLFSLTEKFGYVDWVKFDASFVCGL

AT3G46100.1 Histidyl-tRNA synthetase 12.1e-4271.93Show/hide
Query:  DVGFKVSSRKVLQEVLKCYGIPENLFGKVCIFIDKVKKIPLDEMKKELKVVGVSEEAIEELLKVLSVKFLTKLEEILGGGGEALSDLKQLFSLTEKFGYV
        DVGFKVSSRKVLQE+LK YG+PE+LFG+VCI IDK++KIP+DE+KKEL   G+SE+AIE+LL+VLSVK L  LE+I+GG GEA++DLKQLFSL EKFGY 
Subjt:  DVGFKVSSRKVLQEVLKCYGIPENLFGKVCIFIDKVKKIPLDEMKKELKVVGVSEEAIEELLKVLSVKFLTKLEEILGGGGEALSDLKQLFSLTEKFGYV

Query:  DWVKFDASFVCGLA
        +W++FDAS V GLA
Subjt:  DWVKFDASFVCGLA

AT5G03406.1 Class II aaRS and biotin synthetases superfamily protein7.1e-1169.05Show/hide
Query:  DVGFKVSSRKVLQEVLKCYGIPENLFGKVCIFIDKVKKIPLD
        DVGFKVSSRKVLQE LK YG+PE+LFG+VC  IDKV  + ++
Subjt:  DVGFKVSSRKVLQEVLKCYGIPENLFGKVCIFIDKVKKIPLD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTGAAATTGAAATGTTGAATAAATTGGAAAGGGAAAGAAAACAGAGCAGAGATAGAAGAAGAAAGGCCAGAGGAGAAAAGTTCAATCTAGAAGGATTATTTTATTT
GATTTGCAATGCAACTTCCTTGGTTGTTGTTGAAGTTGGGTGGTTTGGGTGGTTGGTGTTGGAGTTGGTCTTCACCACTTTGTTTCCTAAACCAGTTGGACCTTGGAGAA
CGATTTGCAGTGTCCCAGATGTTGGATTCAAGGTTTCCAGTCGGAAGGTTTTGCAAGAAGTATTAAAATGCTATGGAATACCTGAAAATCTGTTTGGCAAGGTTTGCATA
TTCATAGACAAGGTTAAGAAAATTCCATTAGATGAGATGAAGAAGGAACTGAAGGTCGTGGGTGTATCAGAGGAGGCTATTGAGGAGTTGCTGAAAGTTCTTTCAGTAAA
GTTTTTGACAAAGTTAGAAGAAATACTTGGAGGTGGTGGCGAAGCATTGTCTGATCTGAAGCAGCTATTTTCTCTTACTGAAAAGTTTGGGTATGTTGATTGGGTCAAAT
TTGATGCATCCTTTGTCTGTGGCCTTGCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTTGAAATTGAAATGTTGAATAAATTGGAAAGGGAAAGAAAACAGAGCAGAGATAGAAGAAGAAAGGCCAGAGGAGAAAAGTTCAATCTAGAAGGATTATTTTATTT
GATTTGCAATGCAACTTCCTTGGTTGTTGTTGAAGTTGGGTGGTTTGGGTGGTTGGTGTTGGAGTTGGTCTTCACCACTTTGTTTCCTAAACCAGTTGGACCTTGGAGAA
CGATTTGCAGTGTCCCAGATGTTGGATTCAAGGTTTCCAGTCGGAAGGTTTTGCAAGAAGTATTAAAATGCTATGGAATACCTGAAAATCTGTTTGGCAAGGTTTGCATA
TTCATAGACAAGGTTAAGAAAATTCCATTAGATGAGATGAAGAAGGAACTGAAGGTCGTGGGTGTATCAGAGGAGGCTATTGAGGAGTTGCTGAAAGTTCTTTCAGTAAA
GTTTTTGACAAAGTTAGAAGAAATACTTGGAGGTGGTGGCGAAGCATTGTCTGATCTGAAGCAGCTATTTTCTCTTACTGAAAAGTTTGGGTATGTTGATTGGGTCAAAT
TTGATGCATCCTTTGTCTGTGGCCTTGCTTAA
Protein sequenceShow/hide protein sequence
MFEIEMLNKLERERKQSRDRRRKARGEKFNLEGLFYLICNATSLVVVEVGWFGWLVLELVFTTLFPKPVGPWRTICSVPDVGFKVSSRKVLQEVLKCYGIPENLFGKVCI
FIDKVKKIPLDEMKKELKVVGVSEEAIEELLKVLSVKFLTKLEEILGGGGEALSDLKQLFSLTEKFGYVDWVKFDASFVCGLA