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Lag0022686 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0022686
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRNase H domain-containing protein
Genome locationchr7:35543527..35543961
RNA-Seq ExpressionLag0022686
SyntenyLag0022686
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PON88910.1 hypothetical protein TorRG33x02_152930 [Trema orientale]2.7e-0435.44Show/hide
Query:  MEHALFKCSRVREIWDHIHPSINNVQASLLDIKDRWLSLLDCN--GQDFERICVGAWTIWNDRNNFLH---NRPIPDVV
        M+HALF C   R++W H +     ++  +L+     L  +D N   +DFE+ C+  W IW DRN+ LH   +RP+  +V
Subjt:  MEHALFKCSRVREIWDHIHPSINNVQASLLDIKDRWLSLLDCN--GQDFERICVGAWTIWNDRNNFLH---NRPIPDVV

XP_022145060.1 uncharacterized protein LOC111014578 [Momordica charantia]5.7e-0738.1Show/hide
Query:  EEFETMEHALFKCSRVREIWDHIHPSI-------NNVQASLLDIKDRWLSLLDCNGQDFERICVGAWTIWNDRNNFLHNRPIPD
        ++ ET +HALFKC R +E+W+ + P         N+VQ  LL + +        +  DF+ + VG W IWNDRN     R IPD
Subjt:  EEFETMEHALFKCSRVREIWDHIHPSI-------NNVQASLLDIKDRWLSLLDCNGQDFERICVGAWTIWNDRNNFLHNRPIPD

XP_030479133.1 uncharacterized protein LOC115696372 [Cannabis sativa]5.9e-0426.83Show/hide
Query:  WWKKLSKIRLPNK----------------------------------EEFETMEHALFKCSRVREIWDHIHPSINNVQASLLDIKDRWLSLLDCNGQD-F
        WWK   K+ LP+K                                    +E++ HALF C   +E+W     SI+   A  L   D  + L     +  F
Subjt:  WWKKLSKIRLPNK----------------------------------EEFETMEHALFKCSRVREIWDHIHPSINNVQASLLDIKDRWLSLLDCNGQD-F

Query:  ERICVGAWTIWNDRNNFLHNRPI
        E I    W IW+DRNNF+H + +
Subjt:  ERICVGAWTIWNDRNNFLHNRPI

XP_030483228.1 uncharacterized protein LOC115699823 [Cannabis sativa]5.9e-0423.58Show/hide
Query:  TGWWKKLSKIRLPNK----------------------------------EEFETMEHALFKCSRVREIWDHIHPSINNVQASLLDIKDRWLSLLDCNGQ-
        T WWK   +++LP K                                    +E++ H +F C   R +W  +  S NN     + I+D      +C  + 
Subjt:  TGWWKKLSKIRLPNK----------------------------------EEFETMEHALFKCSRVREIWDHIHPSINNVQASLLDIKDRWLSLLDCNGQ-

Query:  DFERICVGAWTIWNDRNNFLHNR
        + E I    W+IW+DRNN +H +
Subjt:  DFERICVGAWTIWNDRNNFLHNR

XP_030502376.1 uncharacterized protein LOC115717528 [Cannabis sativa]4.1e-0533.33Show/hide
Query:  WWKKLSKIRLPNKEEFETMEHALFKCSRVREIWDHIHPSINNVQASLLDIKDRWLSLLD-CNGQDFERICVGAWTIWNDRNNFLHNR
        +W ++     P K + ET++HAL  CSRVR+ W +   +        LDI + +L LL   +  D   +    W +WN RN+F+HN+
Subjt:  WWKKLSKIRLPNKEEFETMEHALFKCSRVREIWDHIHPSINNVQASLLDIKDRWLSLLD-CNGQDFERICVGAWTIWNDRNNFLHNR

TrEMBL top hitse value%identityAlignment
A0A6J1CTE3 uncharacterized protein LOC1110145782.8e-0738.1Show/hide
Query:  EEFETMEHALFKCSRVREIWDHIHPSI-------NNVQASLLDIKDRWLSLLDCNGQDFERICVGAWTIWNDRNNFLHNRPIPD
        ++ ET +HALFKC R +E+W+ + P         N+VQ  LL + +        +  DF+ + VG W IWNDRN     R IPD
Subjt:  EEFETMEHALFKCSRVREIWDHIHPSI-------NNVQASLLDIKDRWLSLLDCNGQDFERICVGAWTIWNDRNNFLHNRPIPD

A0A803NGI9 Uncharacterized protein5.8e-0535.14Show/hide
Query:  FETMEHALFKCSRVREIWDHIHPSINNVQASLLDIKDRWLSLLDC--NGQDFERICVGAWTIWNDRNNFLHNRP
        +E++EHALF C   +++W     S+N    S +   D +L LL    +  + E++    W +WNDRNNF+H +P
Subjt:  FETMEHALFKCSRVREIWDHIHPSINNVQASLLDIKDRWLSLLDC--NGQDFERICVGAWTIWNDRNNFLHNRP

A0A803NM27 Uncharacterized protein5.8e-0534.72Show/hide
Query:  FETMEHALFKCSRVREIWDHIHPSINNVQASLLDIKDRWLSLLDC-NGQDFERICVGAWTIWNDRNNFLHNR
        +E++ HA+F C   R +W     S NN  A  + I+D    + +C    + E I    W+IW+DRNN LH +
Subjt:  FETMEHALFKCSRVREIWDHIHPSINNVQASLLDIKDRWLSLLDC-NGQDFERICVGAWTIWNDRNNFLHNR

A0A803QCM2 Uncharacterized protein7.5e-0533.33Show/hide
Query:  FETMEHALFKCSRVREIWDHIHPSINNVQASLLDIKDRWLSLLDC-NGQDFERICVGAWTIWNDRNNFLHNR
        +E++ HALF C   R +W  +  S  N  A  + I+D    + +C    + E I    W+IW+DRNN +H +
Subjt:  FETMEHALFKCSRVREIWDHIHPSINNVQASLLDIKDRWLSLLDC-NGQDFERICVGAWTIWNDRNNFLHNR

A0A803QPV3 Uncharacterized protein2.6e-0534.72Show/hide
Query:  FETMEHALFKCSRVREIWDHIHPSINNVQASLLDIKDRWLSLLDCNGQ-DFERICVGAWTIWNDRNNFLHNR
        +E++ HA+F C   + +W H + S +   AS +   D  + LL+ + + D E+I    W+IW+DRNN +HN+
Subjt:  FETMEHALFKCSRVREIWDHIHPSINNVQASLLDIKDRWLSLLDCNGQ-DFERICVGAWTIWNDRNNFLHNR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGCATTGGCAGGAGGGTTCCCTGTCAGAAGGAGGATGGGAAACAGGTTGGTGGAAGAAGCTTTCGAAGATTCGTTTGCCAAATAAGGAGGAGTTTGAAACTATGGA
ACATGCGCTCTTTAAATGTAGCAGAGTTAGGGAGATATGGGATCATATTCATCCATCGATTAATAATGTTCAAGCGAGCCTTTTGGATATTAAAGATCGATGGTTGAGTC
TGTTGGATTGTAATGGTCAAGATTTCGAGCGAATTTGTGTAGGAGCTTGGACTATTTGGAATGATAGAAACAACTTTCTTCACAATAGGCCTATTCCTGATGTGGTGACT
TGA
mRNA sequenceShow/hide mRNA sequence
ATGATGCATTGGCAGGAGGGTTCCCTGTCAGAAGGAGGATGGGAAACAGGTTGGTGGAAGAAGCTTTCGAAGATTCGTTTGCCAAATAAGGAGGAGTTTGAAACTATGGA
ACATGCGCTCTTTAAATGTAGCAGAGTTAGGGAGATATGGGATCATATTCATCCATCGATTAATAATGTTCAAGCGAGCCTTTTGGATATTAAAGATCGATGGTTGAGTC
TGTTGGATTGTAATGGTCAAGATTTCGAGCGAATTTGTGTAGGAGCTTGGACTATTTGGAATGATAGAAACAACTTTCTTCACAATAGGCCTATTCCTGATGTGGTGACT
TGA
Protein sequenceShow/hide protein sequence
MMHWQEGSLSEGGWETGWWKKLSKIRLPNKEEFETMEHALFKCSRVREIWDHIHPSINNVQASLLDIKDRWLSLLDCNGQDFERICVGAWTIWNDRNNFLHNRPIPDVVT