; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0022688 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0022688
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionTy3-gypsy retrotransposon protein
Genome locationchr7:35552374..35552766
RNA-Seq ExpressionLag0022688
SyntenyLag0022688
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_031735972.1 uncharacterized protein LOC116401693 [Cucumis sativus]1.8e-2051.94Show/hide
Query:  MAPKKAPAKVTTLSDSYSGHVTRSRSQGIEIKEDHTPLAVASRISKLIEESSKDKVAVKDNPLFESVIPTSKQPKDTLNPDVMSVMMADVDQDERMAEME
        MA KKA +K +  SD+Y+G +TRSRS+GI I+      A+A  I K + ES K  + +K+NPL+      S +     +PDVMSVMMADV  +  MAEME
Subjt:  MAPKKAPAKVTTLSDSYSGHVTRSRSQGIEIKEDHTPLAVASRISKLIEESSKDKVAVKDNPLFESVIPTSKQPKDTLNPDVMSVMMADVDQDERMAEME

Query:  RKLNLLMKAVNERDLEIAYLKNQLQNRET
        RK+NLLMK V+ERD EIA LK Q+Q RET
Subjt:  RKLNLLMKAVNERDLEIAYLKNQLQNRET

XP_031737053.1 uncharacterized protein LOC116402138 [Cucumis sativus]1.8e-2051.94Show/hide
Query:  MAPKKAPAKVTTLSDSYSGHVTRSRSQGIEIKEDHTPLAVASRISKLIEESSKDKVAVKDNPLFESVIPTSKQPKDTLNPDVMSVMMADVDQDERMAEME
        MA KKA +K +  SD+Y+G +TRSRS+GI I+      A+A  I K + ES K  + +K+NPL+      S +     +PDVMSVMMADV  +  MAEME
Subjt:  MAPKKAPAKVTTLSDSYSGHVTRSRSQGIEIKEDHTPLAVASRISKLIEESSKDKVAVKDNPLFESVIPTSKQPKDTLNPDVMSVMMADVDQDERMAEME

Query:  RKLNLLMKAVNERDLEIAYLKNQLQNRET
        RK+NLLMK V+ERD EIA LK Q+Q RET
Subjt:  RKLNLLMKAVNERDLEIAYLKNQLQNRET

XP_031739134.1 uncharacterized protein LOC116402863 [Cucumis sativus]1.8e-2051.94Show/hide
Query:  MAPKKAPAKVTTLSDSYSGHVTRSRSQGIEIKEDHTPLAVASRISKLIEESSKDKVAVKDNPLFESVIPTSKQPKDTLNPDVMSVMMADVDQDERMAEME
        MA KKA +K +  SD+Y+G +TRSRS+GI I+      A+A  I K + ES K  + +K+NPL+      S +     +PDVMSVMMADV  +  MAEME
Subjt:  MAPKKAPAKVTTLSDSYSGHVTRSRSQGIEIKEDHTPLAVASRISKLIEESSKDKVAVKDNPLFESVIPTSKQPKDTLNPDVMSVMMADVDQDERMAEME

Query:  RKLNLLMKAVNERDLEIAYLKNQLQNRET
        RK+NLLMK V+ERD EIA LK Q+Q RET
Subjt:  RKLNLLMKAVNERDLEIAYLKNQLQNRET

XP_031742032.1 uncharacterized protein LOC116404025 [Cucumis sativus]1.8e-2051.94Show/hide
Query:  MAPKKAPAKVTTLSDSYSGHVTRSRSQGIEIKEDHTPLAVASRISKLIEESSKDKVAVKDNPLFESVIPTSKQPKDTLNPDVMSVMMADVDQDERMAEME
        MA KKA +K +  SD+Y+G +TRSRS+GI I+      A+A  I K + ES K  + +K+NPL+      S +     +PDVMSVMMADV  +  MAEME
Subjt:  MAPKKAPAKVTTLSDSYSGHVTRSRSQGIEIKEDHTPLAVASRISKLIEESSKDKVAVKDNPLFESVIPTSKQPKDTLNPDVMSVMMADVDQDERMAEME

Query:  RKLNLLMKAVNERDLEIAYLKNQLQNRET
        RK+NLLMK V+ERD EIA LK Q+Q RET
Subjt:  RKLNLLMKAVNERDLEIAYLKNQLQNRET

XP_031742199.1 uncharacterized protein LOC105435721 [Cucumis sativus]1.8e-2051.94Show/hide
Query:  MAPKKAPAKVTTLSDSYSGHVTRSRSQGIEIKEDHTPLAVASRISKLIEESSKDKVAVKDNPLFESVIPTSKQPKDTLNPDVMSVMMADVDQDERMAEME
        MA KKA +K +  SD+Y+G +TRSRS+GI I+      A+A  I K + ES K  + +K+NPL+      S +     +PDVMSVMMADV  +  MAEME
Subjt:  MAPKKAPAKVTTLSDSYSGHVTRSRSQGIEIKEDHTPLAVASRISKLIEESSKDKVAVKDNPLFESVIPTSKQPKDTLNPDVMSVMMADVDQDERMAEME

Query:  RKLNLLMKAVNERDLEIAYLKNQLQNRET
        RK+NLLMK V+ERD EIA LK Q+Q RET
Subjt:  RKLNLLMKAVNERDLEIAYLKNQLQNRET

TrEMBL top hitse value%identityAlignment
A0A5A7UF60 Ty3-gypsy retrotransposon protein7.0e-1847.29Show/hide
Query:  MAPKKAPAKVTTLSDSYSGHVTRSRSQGIEIKEDHTPLAVASRISKLIEESSKDKVAVKDNPLFESVIPTSKQPKDTLNPDVMSVMMADVDQDERMAEME
        MA KK  +     SD+Y+G +TRSRS+GI I+E      V   I K + ES K  + +K NPL+++    S   K   +PDVMSVMMAD+  +  MAEME
Subjt:  MAPKKAPAKVTTLSDSYSGHVTRSRSQGIEIKEDHTPLAVASRISKLIEESSKDKVAVKDNPLFESVIPTSKQPKDTLNPDVMSVMMADVDQDERMAEME

Query:  RKLNLLMKAVNERDLEIAYLKNQLQNRET
        +K+N LMKAV ERD EI  L+ Q++ RET
Subjt:  RKLNLLMKAVNERDLEIAYLKNQLQNRET

A0A5A7VFQ8 Ty3-gypsy retrotransposon protein2.4e-1847.29Show/hide
Query:  MAPKKAPAKVTTLSDSYSGHVTRSRSQGIEIKEDHTPLAVASRISKLIEESSKDKVAVKDNPLFESVIPTSKQPKDTLNPDVMSVMMADVDQDERMAEME
        MA KKA +K +  SD+Y G +TRSRS+GI  ++D     VA  I K + ES K  + +K+NPL+++   TS + K    PDVMSVMMAD+  +  M +ME
Subjt:  MAPKKAPAKVTTLSDSYSGHVTRSRSQGIEIKEDHTPLAVASRISKLIEESSKDKVAVKDNPLFESVIPTSKQPKDTLNPDVMSVMMADVDQDERMAEME

Query:  RKLNLLMKAVNERDLEIAYLKNQLQNRET
        RK+N LMK + ERD EI  L++Q+  RET
Subjt:  RKLNLLMKAVNERDLEIAYLKNQLQNRET

A0A5D3BDK1 Ty3-gypsy retrotransposon protein9.2e-1844.96Show/hide
Query:  MAPKKAPAKVTTLSDSYSGHVTRSRSQGIEIKEDHTPLAVASRISKLIEESSKDKVAVKDNPLFESVIPTSKQPKDTLNPDVMSVMMADVDQDERMAEME
        MA KKA +  +  SD+Y+G +TR+RS+GI I+E      +A  I K + ES K  + +K+NPL+++    S + K   +PDVMSV+M D+  +  MAEME
Subjt:  MAPKKAPAKVTTLSDSYSGHVTRSRSQGIEIKEDHTPLAVASRISKLIEESSKDKVAVKDNPLFESVIPTSKQPKDTLNPDVMSVMMADVDQDERMAEME

Query:  RKLNLLMKAVNERDLEIAYLKNQLQNRET
        RK+N LMK V ERD EI  L+ Q++ R+T
Subjt:  RKLNLLMKAVNERDLEIAYLKNQLQNRET

A0A5D3BY54 Ty3-gypsy retrotransposon protein3.7e-1948.06Show/hide
Query:  MAPKKAPAKVTTLSDSYSGHVTRSRSQGIEIKEDHTPLAVASRISKLIEESSKDKVAVKDNPLFESVIPTSKQPKDTLNPDVMSVMMADVDQDERMAEME
        MA KKA +  +  S++Y+G +TRSRS+GI  ++D     VA  I K + ES K  + +K+NPL+++   +S + K   +PDVMSVMMAD+  +  MAEME
Subjt:  MAPKKAPAKVTTLSDSYSGHVTRSRSQGIEIKEDHTPLAVASRISKLIEESSKDKVAVKDNPLFESVIPTSKQPKDTLNPDVMSVMMADVDQDERMAEME

Query:  RKLNLLMKAVNERDLEIAYLKNQLQNRET
        RK+N LMKAV ERD EI  L+ Q++ RET
Subjt:  RKLNLLMKAVNERDLEIAYLKNQLQNRET

A0A5D3C3J8 Ty3-gypsy retrotransposon protein7.0e-1846.88Show/hide
Query:  MAPKKAPAKVTTLSDSYSGHVTRSRSQGIEIKEDHTPLAVASRISKLIEESSKDKVAVKDNPLFESVIPTSKQPKDTLNPDVMSVMMADVDQDERMAEME
        MA KKA +  +  +D+Y+G +TRSR +GI I+E      VA  I K + ES K  + +K+NPL+++    S + K   +PDVMSVMMAD+  +  MAEME
Subjt:  MAPKKAPAKVTTLSDSYSGHVTRSRSQGIEIKEDHTPLAVASRISKLIEESSKDKVAVKDNPLFESVIPTSKQPKDTLNPDVMSVMMADVDQDERMAEME

Query:  RKLNLLMKAVNERDLEIAYLKNQLQNRE
        RK+N LM  V ERD EI  L+ Q+Q RE
Subjt:  RKLNLLMKAVNERDLEIAYLKNQLQNRE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCACCAAAGAAAGCTCCCGCGAAGGTTACAACATTGAGCGACTCTTATTCGGGTCATGTCACTCGTAGTCGTTCCCAAGGAATTGAGATCAAGGAGGATCACACTCC
TCTCGCTGTTGCAAGCAGGATCTCAAAGTTGATTGAAGAATCCTCTAAGGATAAGGTTGCAGTCAAAGACAACCCGCTGTTCGAATCTGTCATTCCAACATCTAAGCAAC
CAAAGGATACACTAAATCCTGATGTGATGTCCGTCATGATGGCCGATGTAGACCAAGATGAAAGAATGGCAGAGATGGAAAGAAAACTCAATCTCTTAATGAAGGCAGTT
AATGAAAGAGATCTTGAGATTGCCTATTTGAAGAACCAGCTGCAAAATCGAGAAACGACTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCACCAAAGAAAGCTCCCGCGAAGGTTACAACATTGAGCGACTCTTATTCGGGTCATGTCACTCGTAGTCGTTCCCAAGGAATTGAGATCAAGGAGGATCACACTCC
TCTCGCTGTTGCAAGCAGGATCTCAAAGTTGATTGAAGAATCCTCTAAGGATAAGGTTGCAGTCAAAGACAACCCGCTGTTCGAATCTGTCATTCCAACATCTAAGCAAC
CAAAGGATACACTAAATCCTGATGTGATGTCCGTCATGATGGCCGATGTAGACCAAGATGAAAGAATGGCAGAGATGGAAAGAAAACTCAATCTCTTAATGAAGGCAGTT
AATGAAAGAGATCTTGAGATTGCCTATTTGAAGAACCAGCTGCAAAATCGAGAAACGACTTAG
Protein sequenceShow/hide protein sequence
MAPKKAPAKVTTLSDSYSGHVTRSRSQGIEIKEDHTPLAVASRISKLIEESSKDKVAVKDNPLFESVIPTSKQPKDTLNPDVMSVMMADVDQDERMAEMERKLNLLMKAV
NERDLEIAYLKNQLQNRETT