; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0022693 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0022693
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrotransposon gag protein
Genome locationchr7:35690273..35692541
RNA-Seq ExpressionLag0022693
SyntenyLag0022693
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036008.1 Retrotransposon gag protein [Cucumis melo var. makuwa]2.1e-1560.22Show/hide
Query:  MSTSTRPSAFQRLSVSTSKKSRSSKSVFDRLKVTNDQPKRKMNNLELKLFDEVNSDKKLHSSISSRMKRKFSVLINTEGSLKVLTRFAAVPYP
        MST  R SAF+RLS+STSKK R S S FDRLK+TNDQ +R+M + + K F E N D K+HS + SRMKRK SV INTEGSL V  RF     P
Subjt:  MSTSTRPSAFQRLSVSTSKKSRSSKSVFDRLKVTNDQPKRKMNNLELKLFDEVNSDKKLHSSISSRMKRKFSVLINTEGSLKVLTRFAAVPYP

KAA0044978.1 retrotransposon gag protein [Cucumis melo var. makuwa]2.7e-1560.87Show/hide
Query:  STSTRPSAFQRLSVSTSKKSRSSKSVFDRLKVTNDQPKRKMNNLELKLFDEVNSDKKLHSSISSRMKRKFSVLINTEGSLKVLTRFAAVPYP
        ST  R SAF+RLS+STSKK R S S FDRLK+TNDQ +R+M +L+ K F E N D K+HS + SRMKRK SV INTEGSL V  RF     P
Subjt:  STSTRPSAFQRLSVSTSKKSRSSKSVFDRLKVTNDQPKRKMNNLELKLFDEVNSDKKLHSSISSRMKRKFSVLINTEGSLKVLTRFAAVPYP

KAA0050734.1 gag protease polyprotein [Cucumis melo var. makuwa]2.7e-1560.87Show/hide
Query:  STSTRPSAFQRLSVSTSKKSRSSKSVFDRLKVTNDQPKRKMNNLELKLFDEVNSDKKLHSSISSRMKRKFSVLINTEGSLKVLTRFAAVPYP
        ST  R SAF+RLS+STSKK R S S FDRLK+TNDQ +R+M +L+ K F E N D K+HS + SRMKRK SV INTEGSL V  RF     P
Subjt:  STSTRPSAFQRLSVSTSKKSRSSKSVFDRLKVTNDQPKRKMNNLELKLFDEVNSDKKLHSSISSRMKRKFSVLINTEGSLKVLTRFAAVPYP

KAA0057874.1 gag protease polyprotein [Cucumis melo var. makuwa]7.2e-1661.96Show/hide
Query:  STSTRPSAFQRLSVSTSKKSRSSKSVFDRLKVTNDQPKRKMNNLELKLFDEVNSDKKLHSSISSRMKRKFSVLINTEGSLKVLTRFAAVPYP
        ST TR SAF+RLS+STSKK R S S FDRLK+TNDQ +R+M  L+ K F E N D K+H+ +SSRMKRK SV INTEGSL V  RF     P
Subjt:  STSTRPSAFQRLSVSTSKKSRSSKSVFDRLKVTNDQPKRKMNNLELKLFDEVNSDKKLHSSISSRMKRKFSVLINTEGSLKVLTRFAAVPYP

TYK28989.1 retrotransposon gag protein [Cucumis melo var. makuwa]1.2e-1561.8Show/hide
Query:  TRPSAFQRLSVSTSKKSRSSKSVFDRLKVTNDQPKRKMNNLELKLFDEVNSDKKLHSSISSRMKRKFSVLINTEGSLKVLTRFAAVPYP
        TR SAF+RLS+STSKK R S+S FDRLK+TNDQ +R+M +L+ K F E N D K+HS + SRMKRK SV INTEGSL V  RF     P
Subjt:  TRPSAFQRLSVSTSKKSRSSKSVFDRLKVTNDQPKRKMNNLELKLFDEVNSDKKLHSSISSRMKRKFSVLINTEGSLKVLTRFAAVPYP

TrEMBL top hitse value%identityAlignment
A0A5A7SZJ7 Retrotransposon gag protein1.0e-1560.22Show/hide
Query:  MSTSTRPSAFQRLSVSTSKKSRSSKSVFDRLKVTNDQPKRKMNNLELKLFDEVNSDKKLHSSISSRMKRKFSVLINTEGSLKVLTRFAAVPYP
        MST  R SAF+RLS+STSKK R S S FDRLK+TNDQ +R+M + + K F E N D K+HS + SRMKRK SV INTEGSL V  RF     P
Subjt:  MSTSTRPSAFQRLSVSTSKKSRSSKSVFDRLKVTNDQPKRKMNNLELKLFDEVNSDKKLHSSISSRMKRKFSVLINTEGSLKVLTRFAAVPYP

A0A5A7TQ06 Retrotransposon gag protein1.3e-1560.87Show/hide
Query:  STSTRPSAFQRLSVSTSKKSRSSKSVFDRLKVTNDQPKRKMNNLELKLFDEVNSDKKLHSSISSRMKRKFSVLINTEGSLKVLTRFAAVPYP
        ST  R SAF+RLS+STSKK R S S FDRLK+TNDQ +R+M +L+ K F E N D K+HS + SRMKRK SV INTEGSL V  RF     P
Subjt:  STSTRPSAFQRLSVSTSKKSRSSKSVFDRLKVTNDQPKRKMNNLELKLFDEVNSDKKLHSSISSRMKRKFSVLINTEGSLKVLTRFAAVPYP

A0A5A7URU7 Gag protease polyprotein3.5e-1661.96Show/hide
Query:  STSTRPSAFQRLSVSTSKKSRSSKSVFDRLKVTNDQPKRKMNNLELKLFDEVNSDKKLHSSISSRMKRKFSVLINTEGSLKVLTRFAAVPYP
        ST TR SAF+RLS+STSKK R S S FDRLK+TNDQ +R+M  L+ K F E N D K+H+ +SSRMKRK SV INTEGSL V  RF     P
Subjt:  STSTRPSAFQRLSVSTSKKSRSSKSVFDRLKVTNDQPKRKMNNLELKLFDEVNSDKKLHSSISSRMKRKFSVLINTEGSLKVLTRFAAVPYP

A0A5D3BBF9 Gag protease polyprotein1.3e-1560.87Show/hide
Query:  STSTRPSAFQRLSVSTSKKSRSSKSVFDRLKVTNDQPKRKMNNLELKLFDEVNSDKKLHSSISSRMKRKFSVLINTEGSLKVLTRFAAVPYP
        ST  R SAF+RLS+STSKK R S S FDRLK+TNDQ +R+M +L+ K F E N D K+HS + SRMKRK SV INTEGSL V  RF     P
Subjt:  STSTRPSAFQRLSVSTSKKSRSSKSVFDRLKVTNDQPKRKMNNLELKLFDEVNSDKKLHSSISSRMKRKFSVLINTEGSLKVLTRFAAVPYP

A0A5D3DZZ8 Retrotransposon gag protein6.0e-1661.8Show/hide
Query:  TRPSAFQRLSVSTSKKSRSSKSVFDRLKVTNDQPKRKMNNLELKLFDEVNSDKKLHSSISSRMKRKFSVLINTEGSLKVLTRFAAVPYP
        TR SAF+RLS+STSKK R S+S FDRLK+TNDQ +R+M +L+ K F E N D K+HS + SRMKRK SV INTEGSL V  RF     P
Subjt:  TRPSAFQRLSVSTSKKSRSSKSVFDRLKVTNDQPKRKMNNLELKLFDEVNSDKKLHSSISSRMKRKFSVLINTEGSLKVLTRFAAVPYP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCACCTCCACTCGACCTTCAGCTTTCCAAAGGCTAAGTGTCTCCACATCGAAGAAAAGTCGATCTTCAAAATCTGTCTTTGATCGCCTCAAAGTAACAAACGATCA
ACCTAAAAGAAAGATGAACAACTTGGAGTTGAAACTTTTCGATGAAGTAAACAGTGACAAGAAGCTTCATAGTAGCATCTCGTCACGTATGAAGAGGAAGTTTTCTGTTC
TCATAAATACGGAAGGTTCCTTGAAGGTTCTCACGCGCTTCGCTGCAGTTCCTTACCCCCAAGTTCGAAGGTTCTCACGCGCTTCGCTGCATTCCTTCCTCACAGTTCGA
AGGTTCTCATGCGCTTCGCTGCAGTTCCTTCCCCCAAGTTCGAAGGTTCTCACGCGCTTCGCTGCAGTTCCTTCCCCCAAGTTCGAAGGTTCTCACGTCGCTTCGCTGCA
ATTCCTTCCTCCAAGTTTGAAGGTTCTCACATCGCTTCGCTTCGCGCTGCGCTTCGTTGCAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACACGCTTCACTGCAGTTTCT
TCTCCCTAACTTCGAAGGTTCTCACGCGCTTCGCTGCAATTCCTTCCTCCCTAAGTTTGAAGGTTCTCACGTTGCTTCGCTGTAGTTCCTTCCTCCAAGTTCGAAGGTTT
TCATGCGCTTTGCTGCAGTTCCTTCTCTCCACGTTCAAAGGTTCTCACGCAGCTTTGCTGGAGTTTCTTCTCCCCAAGTTCGAAGTTCCTTCTCCCAAATTTGAAGGTTC
TCACGCGCTTCGCTGCAGTTCCTTCCTCCAAGTTCGAAGGTTCTCCACTGCTGCAGTTCATTCTTCCAAGTTCGAAGGTTCTCACGTCGCTTCGCTGCAGTTCCTTCCTC
CAAGTTCGAAGGTTCTCACGTGCTTCGTTGCAGTTCCTTCTCTCCAAGGTCGAAGGTTCTCACGCGCTGCGTTGCAGTTCTTTCTCCCCAAGTTCGAAGGTTCACGCACT
TCACTGCACTTCACTGCAGTTCCTTCTCCCAAATTCGAAGGTTCTCACGCGCTTCGCTCTGCAATTCCTTCCCCCAAGTTCGAAGGTTCTCACGCGCTTCGTGCAGTTCC
TTCCTCCAATTCGAAGGTTCTCACGCGCTTCGGTGAAGTTCCTTCCTCCAAGTCTGAAGGTTCTCACGCACTTCGCTGCAGTTCCTTCCCCCAAGTTCGAAGGTTCTCAC
GCGCTTCGCTGCAGTTCCTTCCTCACAGTTCGAAGGTTCTCACGCGCTTCGCTGCAGTTCCTTCCCCCCAAGTTCGAAGGTTCTCACGTCGCTTCGCTGCAGTTCCTTCC
TCCAAGTTTGAAGGTTCTCACATCGCTTCGCTTCGCGCTGCGCTTCGTTGCAGTTCCTTCCTCCAAGTTCGAAGGTTTTCACGCGCTTCGTTGCAGTTTCTTCTCCCTAA
GTTCGAAGGTTCTCACGCGCTTCGATGCAGTTCCTTCCTCCCTAAGTTCGAAGGTTCTCACTCGCTTCGCTGCAGTTCCTTCCTCCAAATTCGAAGGTTTCGAAGGTTCT
CACGCGCTGTGATTCGTTGTAGTTCCTTCCTCCAAGTTCGAAGGTTCTCATGCGCTTCGCTGCACAATTCTTTCCTCCAAGTTCGAAGGTTCTCATGCGCTTCGTTGCTA
CCTTCCTCCAAGTTCGAAGGTTCTCTCACGCGCTGCTGCAGCTCCTTCCTCCAAGTTCGAAGGTTCCCTCATGCGCTTCGCTTCGAAGGTTTCGAAGGTTCTCACGCGCT
GTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCCACCTCCACTCGACCTTCAGCTTTCCAAAGGCTAAGTGTCTCCACATCGAAGAAAAGTCGATCTTCAAAATCTGTCTTTGATCGCCTCAAAGTAACAAACGATCA
ACCTAAAAGAAAGATGAACAACTTGGAGTTGAAACTTTTCGATGAAGTAAACAGTGACAAGAAGCTTCATAGTAGCATCTCGTCACGTATGAAGAGGAAGTTTTCTGTTC
TCATAAATACGGAAGGTTCCTTGAAGGTTCTCACGCGCTTCGCTGCAGTTCCTTACCCCCAAGTTCGAAGGTTCTCACGCGCTTCGCTGCATTCCTTCCTCACAGTTCGA
AGGTTCTCATGCGCTTCGCTGCAGTTCCTTCCCCCAAGTTCGAAGGTTCTCACGCGCTTCGCTGCAGTTCCTTCCCCCAAGTTCGAAGGTTCTCACGTCGCTTCGCTGCA
ATTCCTTCCTCCAAGTTTGAAGGTTCTCACATCGCTTCGCTTCGCGCTGCGCTTCGTTGCAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACACGCTTCACTGCAGTTTCT
TCTCCCTAACTTCGAAGGTTCTCACGCGCTTCGCTGCAATTCCTTCCTCCCTAAGTTTGAAGGTTCTCACGTTGCTTCGCTGTAGTTCCTTCCTCCAAGTTCGAAGGTTT
TCATGCGCTTTGCTGCAGTTCCTTCTCTCCACGTTCAAAGGTTCTCACGCAGCTTTGCTGGAGTTTCTTCTCCCCAAGTTCGAAGTTCCTTCTCCCAAATTTGAAGGTTC
TCACGCGCTTCGCTGCAGTTCCTTCCTCCAAGTTCGAAGGTTCTCCACTGCTGCAGTTCATTCTTCCAAGTTCGAAGGTTCTCACGTCGCTTCGCTGCAGTTCCTTCCTC
CAAGTTCGAAGGTTCTCACGTGCTTCGTTGCAGTTCCTTCTCTCCAAGGTCGAAGGTTCTCACGCGCTGCGTTGCAGTTCTTTCTCCCCAAGTTCGAAGGTTCACGCACT
TCACTGCACTTCACTGCAGTTCCTTCTCCCAAATTCGAAGGTTCTCACGCGCTTCGCTCTGCAATTCCTTCCCCCAAGTTCGAAGGTTCTCACGCGCTTCGTGCAGTTCC
TTCCTCCAATTCGAAGGTTCTCACGCGCTTCGGTGAAGTTCCTTCCTCCAAGTCTGAAGGTTCTCACGCACTTCGCTGCAGTTCCTTCCCCCAAGTTCGAAGGTTCTCAC
GCGCTTCGCTGCAGTTCCTTCCTCACAGTTCGAAGGTTCTCACGCGCTTCGCTGCAGTTCCTTCCCCCCAAGTTCGAAGGTTCTCACGTCGCTTCGCTGCAGTTCCTTCC
TCCAAGTTTGAAGGTTCTCACATCGCTTCGCTTCGCGCTGCGCTTCGTTGCAGTTCCTTCCTCCAAGTTCGAAGGTTTTCACGCGCTTCGTTGCAGTTTCTTCTCCCTAA
GTTCGAAGGTTCTCACGCGCTTCGATGCAGTTCCTTCCTCCCTAAGTTCGAAGGTTCTCACTCGCTTCGCTGCAGTTCCTTCCTCCAAATTCGAAGGTTTCGAAGGTTCT
CACGCGCTGTGATTCGTTGTAGTTCCTTCCTCCAAGTTCGAAGGTTCTCATGCGCTTCGCTGCACAATTCTTTCCTCCAAGTTCGAAGGTTCTCATGCGCTTCGTTGCTA
CCTTCCTCCAAGTTCGAAGGTTCTCTCACGCGCTGCTGCAGCTCCTTCCTCCAAGTTCGAAGGTTCCCTCATGCGCTTCGCTTCGAAGGTTTCGAAGGTTCTCACGCGCT
GTGA
Protein sequenceShow/hide protein sequence
MSTSTRPSAFQRLSVSTSKKSRSSKSVFDRLKVTNDQPKRKMNNLELKLFDEVNSDKKLHSSISSRMKRKFSVLINTEGSLKVLTRFAAVPYPQVRRFSRASLHSFLTVR
RFSCASLQFLPPSSKVLTRFAAVPSPKFEGSHVASLQFLPPSLKVLTSLRFALRFVAVPSSKFEGSHTLHCSFFSLTSKVLTRFAAIPSSLSLKVLTLLRCSSFLQVRRF
SCALLQFLLSTFKGSHAALLEFLLPKFEVPSPKFEGSHALRCSSFLQVRRFSTAAVHSSKFEGSHVASLQFLPPSSKVLTCFVAVPSLQGRRFSRAALQFFLPKFEGSRT
SLHFTAVPSPKFEGSHALRSAIPSPKFEGSHALRAVPSSNSKVLTRFGEVPSSKSEGSHALRCSSFPQVRRFSRASLQFLPHSSKVLTRFAAVPSPQVRRFSRRFAAVPS
SKFEGSHIASLRAALRCSSFLQVRRFSRASLQFLLPKFEGSHALRCSSFLPKFEGSHSLRCSSFLQIRRFRRFSRAVIRCSSFLQVRRFSCASLHNSFLQVRRFSCASLL
PSSKFEGSLTRCCSSFLQVRRFPHALRFEGFEGSHAL