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Lag0022708 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0022708
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionDNA-directed RNA polymerase V subunit 5C-like
Genome locationchr7:36074220..36074528
RNA-Seq ExpressionLag0022708
SyntenyLag0022708
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PON44141.1 hypothetical protein PanWU01x14_268850 [Parasponia andersonii]5.8e-1442.86Show/hide
Query:  LKLVVNKGVQWKESQTKVKSLVPSDLKPKSAVWLHFLKNRLMPTIHDSTISIERVMLFYCIMKGLEINIGSIIREKILACGRKRARKLFFGSLITQFC
        L+ V   GV+W  S       + S L P + VW HFLK+ L+PT H   +S ERV+L Y ++ G  IN+G +I  +I AC  +++R LFF SLIT+ C
Subjt:  LKLVVNKGVQWKESQTKVKSLVPSDLKPKSAVWLHFLKNRLMPTIHDSTISIERVMLFYCIMKGLEINIGSIIREKILACGRKRARKLFFGSLITQFC

PON50458.1 hypothetical protein PanWU01x14_223230, partial [Parasponia andersonii]2.2e-1340.82Show/hide
Query:  LKLVVNKGVQWKESQTKVKSLVPSDLKPKSAVWLHFLKNRLMPTIHDSTISIERVMLFYCIMKGLEINIGSIIREKILACGRKRARKLFFGSLITQFC
        L+ V   G +W  S   V + + S L P + +W HFLK+RL+PT H   +S ERV+L Y ++ G  IN+G +I  +I AC  +++  LFF SLI + C
Subjt:  LKLVVNKGVQWKESQTKVKSLVPSDLKPKSAVWLHFLKNRLMPTIHDSTISIERVMLFYCIMKGLEINIGSIIREKILACGRKRARKLFFGSLITQFC

PON62892.1 hypothetical protein PanWU01x14_135680 [Parasponia andersonii]7.6e-1442.86Show/hide
Query:  LKLVVNKGVQWKESQTKVKSLVPSDLKPKSAVWLHFLKNRLMPTIHDSTISIERVMLFYCIMKGLEINIGSIIREKILACGRKRARKLFFGSLITQFC
        L+ V   G +W  S     + + S L P + VW HFLK+RL+PT H  T+S ERV+L Y ++ G  IN+G II  +I A   +++  LFF SLIT+ C
Subjt:  LKLVVNKGVQWKESQTKVKSLVPSDLKPKSAVWLHFLKNRLMPTIHDSTISIERVMLFYCIMKGLEINIGSIIREKILACGRKRARKLFFGSLITQFC

PON70375.1 hypothetical protein PanWU01x14_080440 [Parasponia andersonii]1.7e-1341.84Show/hide
Query:  LKLVVNKGVQWKESQTKVKSLVPSDLKPKSAVWLHFLKNRLMPTIHDSTISIERVMLFYCIMKGLEINIGSIIREKILACGRKRARKLFFGSLITQFC
        L+ V   G +W  S     + + S L P + VW HFLK+RL+PT H  T+S E V L Y ++ G  IN+G +I  +I AC  +++  LFF SLIT  C
Subjt:  LKLVVNKGVQWKESQTKVKSLVPSDLKPKSAVWLHFLKNRLMPTIHDSTISIERVMLFYCIMKGLEINIGSIIREKILACGRKRARKLFFGSLITQFC

XP_024971944.1 uncharacterized protein LOC112510826 [Cynara cardunculus var. scolymus]2.9e-1342.05Show/hide
Query:  GVQW-KESQTKVKSLVPSDLKPKSAVWLHFLKNRLMPTIHDSTISIERVMLFYCIMKGLEINIGSIIREKILACGRKRARKLFFGSLI
        G++W   S   +++   S+LKP + VW++F++  L PT HDS+IS+E+++L YC++ G  IN+G ++ + IL C ++R  KLFF SLI
Subjt:  GVQW-KESQTKVKSLVPSDLKPKSAVWLHFLKNRLMPTIHDSTISIERVMLFYCIMKGLEINIGSIIREKILACGRKRARKLFFGSLI

TrEMBL top hitse value%identityAlignment
A0A2P5B5S0 Uncharacterized protein2.8e-1442.86Show/hide
Query:  LKLVVNKGVQWKESQTKVKSLVPSDLKPKSAVWLHFLKNRLMPTIHDSTISIERVMLFYCIMKGLEINIGSIIREKILACGRKRARKLFFGSLITQFC
        L+ V   GV+W  S       + S L P + VW HFLK+ L+PT H   +S ERV+L Y ++ G  IN+G +I  +I AC  +++R LFF SLIT+ C
Subjt:  LKLVVNKGVQWKESQTKVKSLVPSDLKPKSAVWLHFLKNRLMPTIHDSTISIERVMLFYCIMKGLEINIGSIIREKILACGRKRARKLFFGSLITQFC

A0A2P5BCG4 Uncharacterized protein (Fragment)4.1e-1339.8Show/hide
Query:  LKLVVNKGVQWKESQTKVKSLVPSDLKPKSAVWLHFLKNRLMPTIHDSTISIERVMLFYCIMKGLEINIGSIIREKILACGRKRARKLFFGSLITQFC
        L+ V   G +W  S     + + S L P + VW HFLK+RL+PT H  T+S +R++L + ++ G  IN+G +I  +I AC  ++   LFF SLIT+ C
Subjt:  LKLVVNKGVQWKESQTKVKSLVPSDLKPKSAVWLHFLKNRLMPTIHDSTISIERVMLFYCIMKGLEINIGSIIREKILACGRKRARKLFFGSLITQFC

A0A2P5BNT0 Uncharacterized protein (Fragment)1.1e-1340.82Show/hide
Query:  LKLVVNKGVQWKESQTKVKSLVPSDLKPKSAVWLHFLKNRLMPTIHDSTISIERVMLFYCIMKGLEINIGSIIREKILACGRKRARKLFFGSLITQFC
        L+ V   G +W  S   V + + S L P + +W HFLK+RL+PT H   +S ERV+L Y ++ G  IN+G +I  +I AC  +++  LFF SLI + C
Subjt:  LKLVVNKGVQWKESQTKVKSLVPSDLKPKSAVWLHFLKNRLMPTIHDSTISIERVMLFYCIMKGLEINIGSIIREKILACGRKRARKLFFGSLITQFC

A0A2P5CPE8 Uncharacterized protein3.7e-1442.86Show/hide
Query:  LKLVVNKGVQWKESQTKVKSLVPSDLKPKSAVWLHFLKNRLMPTIHDSTISIERVMLFYCIMKGLEINIGSIIREKILACGRKRARKLFFGSLITQFC
        L+ V   G +W  S     + + S L P + VW HFLK+RL+PT H  T+S ERV+L Y ++ G  IN+G II  +I A   +++  LFF SLIT+ C
Subjt:  LKLVVNKGVQWKESQTKVKSLVPSDLKPKSAVWLHFLKNRLMPTIHDSTISIERVMLFYCIMKGLEINIGSIIREKILACGRKRARKLFFGSLITQFC

A0A2P5DAQ2 Uncharacterized protein8.2e-1441.84Show/hide
Query:  LKLVVNKGVQWKESQTKVKSLVPSDLKPKSAVWLHFLKNRLMPTIHDSTISIERVMLFYCIMKGLEINIGSIIREKILACGRKRARKLFFGSLITQFC
        L+ V   G +W  S     + + S L P + VW HFLK+RL+PT H  T+S E V L Y ++ G  IN+G +I  +I AC  +++  LFF SLIT  C
Subjt:  LKLVVNKGVQWKESQTKVKSLVPSDLKPKSAVWLHFLKNRLMPTIHDSTISIERVMLFYCIMKGLEINIGSIIREKILACGRKRARKLFFGSLITQFC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAGATGCACTAAAACTGGTGGTCAACAAGGGAGTTCAGTGGAAAGAATCCCAAACGAAGGTGAAGTCTCTAGTGCCAAGCGACTTAAAGCCAAAATCGGCAGTGTG
GCTTCACTTTCTCAAAAACCGACTGATGCCAACCATCCATGATAGCACCATCTCAATAGAGAGAGTTATGCTCTTCTACTGTATTATGAAAGGGTTGGAGATCAACATCG
GGAGTATTATCAGGGAGAAGATTCTTGCATGTGGAAGGAAAAGAGCAAGAAAGCTTTTCTTTGGATCACTGATTACCCAGTTTTGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAAGATGCACTAAAACTGGTGGTCAACAAGGGAGTTCAGTGGAAAGAATCCCAAACGAAGGTGAAGTCTCTAGTGCCAAGCGACTTAAAGCCAAAATCGGCAGTGTG
GCTTCACTTTCTCAAAAACCGACTGATGCCAACCATCCATGATAGCACCATCTCAATAGAGAGAGTTATGCTCTTCTACTGTATTATGAAAGGGTTGGAGATCAACATCG
GGAGTATTATCAGGGAGAAGATTCTTGCATGTGGAAGGAAAAGAGCAAGAAAGCTTTTCTTTGGATCACTGATTACCCAGTTTTGTTAG
Protein sequenceShow/hide protein sequence
MKDALKLVVNKGVQWKESQTKVKSLVPSDLKPKSAVWLHFLKNRLMPTIHDSTISIERVMLFYCIMKGLEINIGSIIREKILACGRKRARKLFFGSLITQFC