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Lag0022710 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0022710
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr7:36087021..36091300
RNA-Seq ExpressionLag0022710
SyntenyLag0022710
Gene Ontology termsGO:0016020 - membrane (cellular component)
GO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PSS05945.1 Integrase [Actinidia chinensis var. chinensis]5.2e-1247.12Show/hide
Query:  GEYGVSATFNVADLSPFDVGDGYDSRTNPFVEGEDDVNQGTS-------IVMPEGPITRSRAKKLQQALITYIQ---AMVSSTKDVQGDVGLFPYTISKV
        GEY VSATFN++DLSPF VGD  D RTNPF E E+D +   +       I +P GPITR+RAKK Q AL   IQ   A  S  + + GD       IS +
Subjt:  GEYGVSATFNVADLSPFDVGDGYDSRTNPFVEGEDDVNQGTS-------IVMPEGPITRSRAKKLQQALITYIQ---AMVSSTKDVQGDVGLFPYTISKV

Query:  EIQD
        ++Q+
Subjt:  EIQD

XP_022158199.1 uncharacterized protein LOC111024737 [Momordica charantia]6.8e-1279.17Show/hide
Query:  GDGYDSRTNPFVEGEDDVNQGTSIVMPEGPITRSRAKKLQQALITYIQ
        GDGYDSRTNP  E EDDVNQG++IVMP+GPITRSR+KKLQQAL++Y+Q
Subjt:  GDGYDSRTNPFVEGEDDVNQGTSIVMPEGPITRSRAKKLQQALITYIQ

XP_022158803.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111025268 [Momordica charantia]8.9e-1258.67Show/hide
Query:  GEYGVSATFNVADLSPFDVGDGY-DSRTNPFVEGEDDVNQGTSIVMPEGPITRSRAKKLQQALITYIQAMVSSTK
        G++ VS+TFNVADLSPFDVGD   DSRTN   EGEDD N G   V   GPITR++AKKLQQA + ++Q  + S +
Subjt:  GEYGVSATFNVADLSPFDVGDGY-DSRTNPFVEGEDDVNQGTSIVMPEGPITRSRAKKLQQALITYIQAMVSSTK

XP_022932136.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111438459, partial [Cucurbita moschata]9.9e-1157.97Show/hide
Query:  QGEYGVSATFNVADLSPFDVG-DGYDSRTNPFVEGEDDVNQ-GTSIVMPEGPITRSRAKKLQQALITYI
        +GEY VS+TFNVADL+PFDVG +  D RTNPF E EDD+N     + +PEGPITRS+ KK+Q+A   ++
Subjt:  QGEYGVSATFNVADLSPFDVG-DGYDSRTNPFVEGEDDVNQ-GTSIVMPEGPITRSRAKKLQQALITYI

XP_038900633.1 uncharacterized protein LOC120087799 [Benincasa hispida]2.7e-1663.41Show/hide
Query:  GDGYDSRTNPFVEGEDDVNQGTSIVMPEGPITRSRAKKLQQALITYIQAMVSSTKDVQGDVGLFPYTISKVEIQDGDTLNVF
        GD Y  RTNP  E EDD N+GTSI+M +G I RSRAKKL QALIT+IQAMV+STKD+  DV +  Y + KVE QD D LN F
Subjt:  GDGYDSRTNPFVEGEDDVNQGTSIVMPEGPITRSRAKKLQQALITYIQAMVSSTKDVQGDVGLFPYTISKVEIQDGDTLNVF

TrEMBL top hitse value%identityAlignment
A0A2N9GBZ2 Integrase catalytic domain-containing protein1.6e-1157.5Show/hide
Query:  GEYGVSATFNVADLSPFDVGDGYDSRTNPFVEGEDDVNQG-----TSIVMPEGPITRSRAKKLQQALITYIQAMVSSTKD
        GEY VSATFNV+DLSPFDVG+  DSR+NPF E  +D NQG       + +P+GPITRSRAKK+++A+    Q +V ST D
Subjt:  GEYGVSATFNVADLSPFDVGDGYDSRTNPFVEGEDDVNQG-----TSIVMPEGPITRSRAKKLQQALITYIQAMVSSTKD

A0A2N9I5D4 Xyloglucan:xyloglucosyl transferase1.6e-1157.5Show/hide
Query:  GEYGVSATFNVADLSPFDVGDGYDSRTNPFVEGEDDVNQG-----TSIVMPEGPITRSRAKKLQQALITYIQAMVSSTKD
        GEY VSATFNV+DLSPFDVG+  DSR+NPF E  +D NQG       + +P+GPITRSRAKK+++A+    Q +V ST D
Subjt:  GEYGVSATFNVADLSPFDVGDGYDSRTNPFVEGEDDVNQG-----TSIVMPEGPITRSRAKKLQQALITYIQAMVSSTKD

A0A2R6QCX0 Reverse transcriptase2.5e-1247.12Show/hide
Query:  GEYGVSATFNVADLSPFDVGDGYDSRTNPFVEGEDDVNQGTS-------IVMPEGPITRSRAKKLQQALITYIQ---AMVSSTKDVQGDVGLFPYTISKV
        GEY VSATFN++DLSPF VGD  D RTNPF E E+D +   +       I +P GPITR+RAKK Q AL   IQ   A  S  + + GD       IS +
Subjt:  GEYGVSATFNVADLSPFDVGDGYDSRTNPFVEGEDDVNQGTS-------IVMPEGPITRSRAKKLQQALITYIQ---AMVSSTKDVQGDVGLFPYTISKV

Query:  EIQD
        ++Q+
Subjt:  EIQD

A0A6J1DX46 LOW QUALITY PROTEIN: uncharacterized protein LOC1110252684.3e-1258.67Show/hide
Query:  GEYGVSATFNVADLSPFDVGDGY-DSRTNPFVEGEDDVNQGTSIVMPEGPITRSRAKKLQQALITYIQAMVSSTK
        G++ VS+TFNVADLSPFDVGD   DSRTN   EGEDD N G   V   GPITR++AKKLQQA + ++Q  + S +
Subjt:  GEYGVSATFNVADLSPFDVGDGY-DSRTNPFVEGEDDVNQGTSIVMPEGPITRSRAKKLQQALITYIQAMVSSTK

A0A6J1DYP6 uncharacterized protein LOC1110247373.3e-1279.17Show/hide
Query:  GDGYDSRTNPFVEGEDDVNQGTSIVMPEGPITRSRAKKLQQALITYIQ
        GDGYDSRTNP  E EDDVNQG++IVMP+GPITRSR+KKLQQAL++Y+Q
Subjt:  GDGYDSRTNPFVEGEDDVNQGTSIVMPEGPITRSRAKKLQQALITYIQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGGTTCGGGGGTGTGGAATGCTCTCAAGGGGTGTGAAATGCTCTCAAATGGTGTGGAATGCTCTCAAGGGTTTCTACTTTTGGAGGAAGAAGATGGACGGGTGGG
CTGCTGCATGAAGGCTATTCTGGTGGTGAGGGTGGGCGGTGACATGACGTTTTTACCCCTTGTATTTACGTCGTCGCATAGGGGAAGAAACGACCGAGCATGCAAGAGAT
GGTTGTCGACGCGGCGGATGAAGGTCGTTGGCACGGCGGAGATGGTTCGTCAGCGTGGTGTGAGAGATTCAGCCCTCAGCCTTGTGCAACCCAATAAAACAGCCATTTTA
ACTCCTTCAAATAAGGCCCATAACTCAGCTAAATGGGCCTCCAAGGAAATATCTGAGACATTTGCTAGGGCAAACGTTATTTTCCCCTCTGAATCTCTACCCACCGCACC
GATACTTGACTTCGAAGGAGAAGAAAAACATGCAACATCTGTATTGGTCTTCCAAAATAAGATTATCAGAAGATTTTTACCTCTGACCACTGTTCCGACAAGAAGGCAAG
GTGAGTATGGTGTTAGTGCAACCTTTAATGTTGCTGACTTGAGTCCTTTTGATGTAGGTGATGGCTATGATTCGAGGACAAATCCTTTTGTAGAGGGAGAAGATGATGTG
AACCAAGGAACATCTATTGTCATGCCCGAAGGTCCAATTACAAGGTCGAGAGCCAAGAAGCTACAACAAGCATTAATCACCTATATTCAAGCTATGGTGAGCTCGACAAA
GGACGTTCAAGGAGATGTTGGACTATTTCCCTACACTATTTCCAAAGTTGAGATTCAAGATGGAGACACATTAAATGTATTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGGGTTCGGGGGTGTGGAATGCTCTCAAGGGGTGTGAAATGCTCTCAAATGGTGTGGAATGCTCTCAAGGGTTTCTACTTTTGGAGGAAGAAGATGGACGGGTGGG
CTGCTGCATGAAGGCTATTCTGGTGGTGAGGGTGGGCGGTGACATGACGTTTTTACCCCTTGTATTTACGTCGTCGCATAGGGGAAGAAACGACCGAGCATGCAAGAGAT
GGTTGTCGACGCGGCGGATGAAGGTCGTTGGCACGGCGGAGATGGTTCGTCAGCGTGGTGTGAGAGATTCAGCCCTCAGCCTTGTGCAACCCAATAAAACAGCCATTTTA
ACTCCTTCAAATAAGGCCCATAACTCAGCTAAATGGGCCTCCAAGGAAATATCTGAGACATTTGCTAGGGCAAACGTTATTTTCCCCTCTGAATCTCTACCCACCGCACC
GATACTTGACTTCGAAGGAGAAGAAAAACATGCAACATCTGTATTGGTCTTCCAAAATAAGATTATCAGAAGATTTTTACCTCTGACCACTGTTCCGACAAGAAGGCAAG
GTGAGTATGGTGTTAGTGCAACCTTTAATGTTGCTGACTTGAGTCCTTTTGATGTAGGTGATGGCTATGATTCGAGGACAAATCCTTTTGTAGAGGGAGAAGATGATGTG
AACCAAGGAACATCTATTGTCATGCCCGAAGGTCCAATTACAAGGTCGAGAGCCAAGAAGCTACAACAAGCATTAATCACCTATATTCAAGCTATGGTGAGCTCGACAAA
GGACGTTCAAGGAGATGTTGGACTATTTCCCTACACTATTTCCAAAGTTGAGATTCAAGATGGAGACACATTAAATGTATTTTGA
Protein sequenceShow/hide protein sequence
MEGSGVWNALKGCEMLSNGVECSQGFLLLEEEDGRVGCCMKAILVVRVGGDMTFLPLVFTSSHRGRNDRACKRWLSTRRMKVVGTAEMVRQRGVRDSALSLVQPNKTAIL
TPSNKAHNSAKWASKEISETFARANVIFPSESLPTAPILDFEGEEKHATSVLVFQNKIIRRFLPLTTVPTRRQGEYGVSATFNVADLSPFDVGDGYDSRTNPFVEGEDDV
NQGTSIVMPEGPITRSRAKKLQQALITYIQAMVSSTKDVQGDVGLFPYTISKVEIQDGDTLNVF