| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0032692.1 gag/pol protein [Cucumis melo var. makuwa] | 3.2e-11 | 43.43 | Show/hide |
Query: GYFFNPQENKEFVLTNATFSEEYHIRNNNPQSKVDLSKLTDEATEISTRVVDESTRIVDDAGLLTRVVDKTNTTAQTIILDDGFEDSLSKSKTMNDVNE
G FF+PQEN+ F+ TNATF EEYH+R++ P+SK+ L++ +DEST++VD+ G +RV + T + Q +DG ED LS + MNDV++
Subjt: GYFFNPQENKEFVLTNATFSEEYHIRNNNPQSKVDLSKLTDEATEISTRVVDESTRIVDDAGLLTRVVDKTNTTAQTIILDDGFEDSLSKSKTMNDVNE
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| KAA0060794.1 putative Integrase core domain [Cucumis melo var. makuwa] | 3.4e-13 | 47.27 | Show/hide |
Query: GPPHENERCGYFFNPQENKEFVLTNATFSEEYHIRNNNPQSKVDLSKLTDEATEISTRVVDESTRIVDDAGLLTRVVDKTNTTAQTIILDDGFEDSLSKS
G P E R G FF+PQE++ FV NATF EE H+R++ P+SK+ L++ T DESTR+VD+ G +R VD+T T+AQ +I DDG ED LS
Subjt: GPPHENERCGYFFNPQENKEFVLTNATFSEEYHIRNNNPQSKVDLSKLTDEATEISTRVVDESTRIVDDAGLLTRVVDKTNTTAQTIILDDGFEDSLSKS
Query: KTMNDVNERI
+ MNDV++ +
Subjt: KTMNDVNERI
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| KAA0066471.1 gag/pol protein [Cucumis melo var. makuwa] | 1.4e-11 | 47.52 | Show/hide |
Query: RCGYFFNPQENKEFVLTNATFSEEYHIRNNNPQSKVDLSKLTDEATEISTRVVDESTRIVDDAGLLTRVVDKTNTTAQTIILDDGFEDSLSKSKTMNDVN
R G FFNPQEN+ FV TNATF EE H+R++ P+SK+ L++ T D+S R+VD+ G L+R VD+TNT+ DDG ED LS + MND++
Subjt: RCGYFFNPQENKEFVLTNATFSEEYHIRNNNPQSKVDLSKLTDEATEISTRVVDESTRIVDDAGLLTRVVDKTNTTAQTIILDDGFEDSLSKSKTMNDVN
Query: E
+
Subjt: E
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| TYK05792.1 gag/pol protein [Cucumis melo var. makuwa] | 2.4e-11 | 70.21 | Show/hide |
Query: MRDCPLICTGESGLFADSISLPFWGQDRVGSWERSLTRWNSLLPDIR
+RDCPL CTGESG DSI L FWGQDRVGSWE + TRWNS +P R
Subjt: MRDCPLICTGESGLFADSISLPFWGQDRVGSWERSLTRWNSLLPDIR
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| TYK15984.1 gag/pol protein [Cucumis melo var. makuwa] | 3.2e-11 | 35.87 | Show/hide |
Query: GPPHENERCGYFFNPQENKEFVLTNATFSEEYHIRNNNPQSKVDLSKLTDEATEISTRV-----VDEST-----------RIVDDAGLLTRVVDKTN---
G P E R G FF+PQEN+ FV TNATF EE H+RN+ P+SK+ LS+ TDE+T + V VDE+T R+ +G RVV + N
Subjt: GPPHENERCGYFFNPQENKEFVLTNATFSEEYHIRNNNPQSKVDLSKLTDEATEISTRV-----VDEST-----------RIVDDAGLLTRVVDKTN---
Query: --TTAQTIILDDGFEDSLSKSKTMNDVNERIGIPNFVTVEAIGPFSNQESFVEVFRVVNEGCSLEEHWELKDKDVNQGLNEISC
T Q +I DDG ED LS + MNDV +++ +V+ + E WEL D+ +G+ I C
Subjt: --TTAQTIILDDGFEDSLSKSKTMNDVNERIGIPNFVTVEAIGPFSNQESFVEVFRVVNEGCSLEEHWELKDKDVNQGLNEISC
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7TZD0 Gag/pol protein | 1.5e-11 | 35.87 | Show/hide |
Query: GPPHENERCGYFFNPQENKEFVLTNATFSEEYHIRNNNPQSKVDLSKLTDEATEISTRV-----VDEST-----------RIVDDAGLLTRVVDKTN---
G P E R G FF+PQEN+ FV TNATF EE H+RN+ P+SK+ LS+ TDE+T + V VDE+T R+ +G RVV + N
Subjt: GPPHENERCGYFFNPQENKEFVLTNATFSEEYHIRNNNPQSKVDLSKLTDEATEISTRV-----VDEST-----------RIVDDAGLLTRVVDKTN---
Query: --TTAQTIILDDGFEDSLSKSKTMNDVNERIGIPNFVTVEAIGPFSNQESFVEVFRVVNEGCSLEEHWELKDKDVNQGLNEISC
T Q +I DDG ED LS + MNDV +++ +V+ + E WEL D+ +G+ I C
Subjt: --TTAQTIILDDGFEDSLSKSKTMNDVNERIGIPNFVTVEAIGPFSNQESFVEVFRVVNEGCSLEEHWELKDKDVNQGLNEISC
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| A0A5A7V0F0 Putative Integrase core domain | 1.6e-13 | 47.27 | Show/hide |
Query: GPPHENERCGYFFNPQENKEFVLTNATFSEEYHIRNNNPQSKVDLSKLTDEATEISTRVVDESTRIVDDAGLLTRVVDKTNTTAQTIILDDGFEDSLSKS
G P E R G FF+PQE++ FV NATF EE H+R++ P+SK+ L++ T DESTR+VD+ G +R VD+T T+AQ +I DDG ED LS
Subjt: GPPHENERCGYFFNPQENKEFVLTNATFSEEYHIRNNNPQSKVDLSKLTDEATEISTRVVDESTRIVDDAGLLTRVVDKTNTTAQTIILDDGFEDSLSKS
Query: KTMNDVNERI
+ MNDV++ +
Subjt: KTMNDVNERI
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| A0A5D3BK21 Gag/pol protein | 1.5e-11 | 43.43 | Show/hide |
Query: GYFFNPQENKEFVLTNATFSEEYHIRNNNPQSKVDLSKLTDEATEISTRVVDESTRIVDDAGLLTRVVDKTNTTAQTIILDDGFEDSLSKSKTMNDVNE
G FF+PQEN+ F+ TNATF EEYH+R++ P+SK+ L++ +DEST++VD+ G +RV + T + Q +DG ED LS + MNDV++
Subjt: GYFFNPQENKEFVLTNATFSEEYHIRNNNPQSKVDLSKLTDEATEISTRVVDESTRIVDDAGLLTRVVDKTNTTAQTIILDDGFEDSLSKSKTMNDVNE
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| A0A5D3BUN8 Gag/pol protein | 1.5e-11 | 35.87 | Show/hide |
Query: GPPHENERCGYFFNPQENKEFVLTNATFSEEYHIRNNNPQSKVDLSKLTDEATEISTRV-----VDEST-----------RIVDDAGLLTRVVDKTN---
G P E R G FF+PQEN+ FV TNATF EE H+RN+ P+SK+ LS+ TDE+T + V VDE+T R+ +G RVV + N
Subjt: GPPHENERCGYFFNPQENKEFVLTNATFSEEYHIRNNNPQSKVDLSKLTDEATEISTRV-----VDEST-----------RIVDDAGLLTRVVDKTN---
Query: --TTAQTIILDDGFEDSLSKSKTMNDVNERIGIPNFVTVEAIGPFSNQESFVEVFRVVNEGCSLEEHWELKDKDVNQGLNEISC
T Q +I DDG ED LS + MNDV +++ +V+ + E WEL D+ +G+ I C
Subjt: --TTAQTIILDDGFEDSLSKSKTMNDVNERIGIPNFVTVEAIGPFSNQESFVEVFRVVNEGCSLEEHWELKDKDVNQGLNEISC
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| A0A5D3DUG4 Gag/pol protein | 6.9e-12 | 47.52 | Show/hide |
Query: RCGYFFNPQENKEFVLTNATFSEEYHIRNNNPQSKVDLSKLTDEATEISTRVVDESTRIVDDAGLLTRVVDKTNTTAQTIILDDGFEDSLSKSKTMNDVN
R G FFNPQEN+ FV TNATF EE H+R++ P+SK+ L++ T D+S R+VD+ G L+R VD+TNT+ DDG ED LS + MND++
Subjt: RCGYFFNPQENKEFVLTNATFSEEYHIRNNNPQSKVDLSKLTDEATEISTRVVDESTRIVDDAGLLTRVVDKTNTTAQTIILDDGFEDSLSKSKTMNDVN
Query: E
+
Subjt: E
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