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Lag0022728 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0022728
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionvacuolar protein sorting-associated protein 27-like isoform X2
Genome locationchr7:36515970..36519715
RNA-Seq ExpressionLag0022728
SyntenyLag0022728
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR036770 - Ankyrin repeat-containing domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6588113.1 Rabankyrin-5, partial [Cucurbita argyrosperma subsp. sororia]1.1e-0989.47Show/hide
Query:  LREAIKNGDTHAVRKLLREGIDANYHDKQGLSLLHVPA
        LREAIKNGDTHAV+KLL EG+DANYHDKQGLSLLHV A
Subjt:  LREAIKNGDTHAVRKLLREGIDANYHDKQGLSLLHVPA

XP_022929532.1 vacuolar protein sorting-associated protein 27-like isoform X1 [Cucurbita moschata]1.1e-0989.47Show/hide
Query:  LREAIKNGDTHAVRKLLREGIDANYHDKQGLSLLHVPA
        LREAIKNGDTHAV+KLL EG+DANYHDKQGLSLLHV A
Subjt:  LREAIKNGDTHAVRKLLREGIDANYHDKQGLSLLHVPA

XP_022929548.1 vacuolar protein sorting-associated protein 27-like isoform X2 [Cucurbita moschata]1.1e-0989.47Show/hide
Query:  LREAIKNGDTHAVRKLLREGIDANYHDKQGLSLLHVPA
        LREAIKNGDTHAV+KLL EG+DANYHDKQGLSLLHV A
Subjt:  LREAIKNGDTHAVRKLLREGIDANYHDKQGLSLLHVPA

XP_022929552.1 potassium channel KOR2-like isoform X3 [Cucurbita moschata]1.1e-0989.47Show/hide
Query:  LREAIKNGDTHAVRKLLREGIDANYHDKQGLSLLHVPA
        LREAIKNGDTHAV+KLL EG+DANYHDKQGLSLLHV A
Subjt:  LREAIKNGDTHAVRKLLREGIDANYHDKQGLSLLHVPA

XP_023531352.1 potassium channel KOR2-like isoform X1 [Cucurbita pepo subsp. pepo]1.1e-0989.47Show/hide
Query:  LREAIKNGDTHAVRKLLREGIDANYHDKQGLSLLHVPA
        LREAIKNGDTHAV+KLL EG+DANYHDKQGLSLLHV A
Subjt:  LREAIKNGDTHAVRKLLREGIDANYHDKQGLSLLHVPA

TrEMBL top hitse value%identityAlignment
A0A6J1EN28 potassium channel KOR2-like isoform X35.2e-1089.47Show/hide
Query:  LREAIKNGDTHAVRKLLREGIDANYHDKQGLSLLHVPA
        LREAIKNGDTHAV+KLL EG+DANYHDKQGLSLLHV A
Subjt:  LREAIKNGDTHAVRKLLREGIDANYHDKQGLSLLHVPA

A0A6J1ESF6 vacuolar protein sorting-associated protein 27-like isoform X25.2e-1089.47Show/hide
Query:  LREAIKNGDTHAVRKLLREGIDANYHDKQGLSLLHVPA
        LREAIKNGDTHAV+KLL EG+DANYHDKQGLSLLHV A
Subjt:  LREAIKNGDTHAVRKLLREGIDANYHDKQGLSLLHVPA

A0A6J1EUN7 vacuolar protein sorting-associated protein 27-like isoform X15.2e-1089.47Show/hide
Query:  LREAIKNGDTHAVRKLLREGIDANYHDKQGLSLLHVPA
        LREAIKNGDTHAV+KLL EG+DANYHDKQGLSLLHV A
Subjt:  LREAIKNGDTHAVRKLLREGIDANYHDKQGLSLLHVPA

A0A6J1HTP4 vacuolar protein sorting-associated protein 27-like isoform X12.6e-0986.84Show/hide
Query:  LREAIKNGDTHAVRKLLREGIDANYHDKQGLSLLHVPA
        LREAIKNGDT+AV+KLL EG+DANYHDKQGLSLLHV A
Subjt:  LREAIKNGDTHAVRKLLREGIDANYHDKQGLSLLHVPA

A0A6J1HTR8 vacuolar protein sorting-associated protein 27-like isoform X22.6e-0986.84Show/hide
Query:  LREAIKNGDTHAVRKLLREGIDANYHDKQGLSLLHVPA
        LREAIKNGDT+AV+KLL EG+DANYHDKQGLSLLHV A
Subjt:  LREAIKNGDTHAVRKLLREGIDANYHDKQGLSLLHVPA

SwissProt top hitse value%identityAlignment
Q94BQ3 Protein ALTERED SEED GERMINATION 21.5e-0956.6Show/hide
Query:  TNNNPEPVIDMKQRYVGHCNIGTDTKQASFLGQRGLYFT-----GYFCLWLRE
        T+  PE  IDMK+RYVGHCN+GTD KQASFLGQRG Y       G + +W ++
Subjt:  TNNNPEPVIDMKQRYVGHCNIGTDTKQASFLGQRGLYFT-----GYFCLWLRE

Arabidopsis top hitse value%identityAlignment
AT2G26210.1 Ankyrin repeat family protein7.5e-0966.67Show/hide
Query:  LREAIKNGDTHAVRKLLREGIDANYHDKQGLSLLHV
        LREAIKNGD+   +KLL+EG+DANY D+QG+S+LH+
Subjt:  LREAIKNGDTHAVRKLLREGIDANYHDKQGLSLLHV

AT2G26210.2 Ankyrin repeat family protein7.5e-0966.67Show/hide
Query:  LREAIKNGDTHAVRKLLREGIDANYHDKQGLSLLHV
        LREAIKNGD+   +KLL+EG+DANY D+QG+S+LH+
Subjt:  LREAIKNGDTHAVRKLLREGIDANYHDKQGLSLLHV

AT2G26210.3 Ankyrin repeat family protein7.5e-0966.67Show/hide
Query:  LREAIKNGDTHAVRKLLREGIDANYHDKQGLSLLHV
        LREAIKNGD+   +KLL+EG+DANY D+QG+S+LH+
Subjt:  LREAIKNGDTHAVRKLLREGIDANYHDKQGLSLLHV

AT5G10940.1 transducin family protein / WD-40 repeat family protein1.0e-1056.6Show/hide
Query:  TNNNPEPVIDMKQRYVGHCNIGTDTKQASFLGQRGLYFT-----GYFCLWLRE
        T+  PE  IDMK+RYVGHCN+GTD KQASFLGQRG Y       G + +W ++
Subjt:  TNNNPEPVIDMKQRYVGHCNIGTDTKQASFLGQRGLYFT-----GYFCLWLRE

AT5G10940.2 transducin family protein / WD-40 repeat family protein1.0e-1056.6Show/hide
Query:  TNNNPEPVIDMKQRYVGHCNIGTDTKQASFLGQRGLYFT-----GYFCLWLRE
        T+  PE  IDMK+RYVGHCN+GTD KQASFLGQRG Y       G + +W ++
Subjt:  TNNNPEPVIDMKQRYVGHCNIGTDTKQASFLGQRGLYFT-----GYFCLWLRE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTGGCAAACAACAGCTTGGCAACACGGTTCTTCTTCTCTACACGCGATGGCGCGCGACCAACGTCACTTGCAAGTCGTCTCTTCTCCAGTGTTTTTCTCCACAAA
CAACAACCCTGAACCCGTTATTGATATGAAACAAAGATATGTTGGTCATTGTAATATCGGAACTGATACTAAACAAGCTAGTTTTCTCGGGCAAAGAGGTCTCTATTTTA
CTGGATACTTCTGCCTTTGGTTAAGGGAAGCAATCAAGAATGGCGACACTCATGCTGTCAGGAAACTTTTGCGTGAGGGTATAGATGCAAATTACCATGACAAGCAAGGA
CTGTCTTTGCTGCATGTGCCCGCTGAACAATGCTGGAACTTGGAGATTCAACACTCAAATCGCCGAATACGAAAAGAACGCCTGCTGAACGAAAGGGAAAAATGCGTGGG
TAATCATCCAAACCCAAAAACCAACCAAGTAAAAGCTTCTAATCGCTTACCCACTAGACAACCCGCTGGAAAAACAGAGGAAACGGTCTCGAACACTGCTGGTCGCGCTT
ACGATATTTGCGAGAAAAGAACACCCAAAGGAGGATGGAACGCACCTGCCGACCGAAAGAGGGGAAACCACCGTTGCAGACCTGCGAACACGCCGGAGGGGACGAAGAAA
ACACCGAAGGTCGAGCGTTGCACAGTCACGGCTGGGCGGTGGAGACGGCAAGGTAGGGACTCGCAAGGAAGAGAGAAAAGAAGGCTGACGGCGCTGGGAGTACACGGTAC
AAGGAAAGAAAAAAAACGCAAGAGAAGGGAGATAGGGAATGGTGGCTGCGGCAATAATGAAAGAAAAGGGATTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTTGGCAAACAACAGCTTGGCAACACGGTTCTTCTTCTCTACACGCGATGGCGCGCGACCAACGTCACTTGCAAGTCGTCTCTTCTCCAGTGTTTTTCTCCACAAA
CAACAACCCTGAACCCGTTATTGATATGAAACAAAGATATGTTGGTCATTGTAATATCGGAACTGATACTAAACAAGCTAGTTTTCTCGGGCAAAGAGGTCTCTATTTTA
CTGGATACTTCTGCCTTTGGTTAAGGGAAGCAATCAAGAATGGCGACACTCATGCTGTCAGGAAACTTTTGCGTGAGGGTATAGATGCAAATTACCATGACAAGCAAGGA
CTGTCTTTGCTGCATGTGCCCGCTGAACAATGCTGGAACTTGGAGATTCAACACTCAAATCGCCGAATACGAAAAGAACGCCTGCTGAACGAAAGGGAAAAATGCGTGGG
TAATCATCCAAACCCAAAAACCAACCAAGTAAAAGCTTCTAATCGCTTACCCACTAGACAACCCGCTGGAAAAACAGAGGAAACGGTCTCGAACACTGCTGGTCGCGCTT
ACGATATTTGCGAGAAAAGAACACCCAAAGGAGGATGGAACGCACCTGCCGACCGAAAGAGGGGAAACCACCGTTGCAGACCTGCGAACACGCCGGAGGGGACGAAGAAA
ACACCGAAGGTCGAGCGTTGCACAGTCACGGCTGGGCGGTGGAGACGGCAAGGTAGGGACTCGCAAGGAAGAGAGAAAAGAAGGCTGACGGCGCTGGGAGTACACGGTAC
AAGGAAAGAAAAAAAACGCAAGAGAAGGGAGATAGGGAATGGTGGCTGCGGCAATAATGAAAGAAAAGGGATTTAG
Protein sequenceShow/hide protein sequence
MAWQTTAWQHGSSSLHAMARDQRHLQVVSSPVFFSTNNNPEPVIDMKQRYVGHCNIGTDTKQASFLGQRGLYFTGYFCLWLREAIKNGDTHAVRKLLREGIDANYHDKQG
LSLLHVPAEQCWNLEIQHSNRRIRKERLLNEREKCVGNHPNPKTNQVKASNRLPTRQPAGKTEETVSNTAGRAYDICEKRTPKGGWNAPADRKRGNHRCRPANTPEGTKK
TPKVERCTVTAGRWRRQGRDSQGREKRRLTALGVHGTRKEKKRKRREIGNGGCGNNERKGI