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Lag0022730 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0022730
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionDNA ligase
Genome locationchr7:36551496..36551980
RNA-Seq ExpressionLag0022730
SyntenyLag0022730
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0053852.1 hypothetical protein E6C27_scaffold135G002430 [Cucumis melo var. makuwa]2.3e-2369.61Show/hide
Query:  MAQKILLSLTFLLLFLGFSFLISSS---AVPTTRILKSTFD-HPSAQDFVFQDVGDLEMDGGDSFDLVEERLFQQGRMVLENNDYPGTGANNHHDPKSPA
        M QKI    TF LLFL FSFL+SSS   AVPTTRILKSTF+ HPS Q  V +DV DLE+  GDSF    ERLF +GR++LENNDYPGTGANNHHDPKSPA
Subjt:  MAQKILLSLTFLLLFLGFSFLISSS---AVPTTRILKSTFD-HPSAQDFVFQDVGDLEMDGGDSFDLVEERLFQQGRMVLENNDYPGTGANNHHDPKSPA

Query:  KP
        +P
Subjt:  KP

KAG6580910.1 hypothetical protein SDJN03_20912, partial [Cucurbita argyrosperma subsp. sororia]3.7e-2672.73Show/hide
Query:  MAQKILLSL-TFLLLFLGFSFLISSSAVPTTRILKSTFDHPSAQDFVFQDVGDLEMDGGDSFDLVEERLFQQGRMVLENNDYPGTGANNHHDPKSPAKP
        M QKI LSL   LLLFLGFS L+SS AVPTTRI KSTFD PSAQDFVFQDV DLE +GGD F          GR VLENNDYPGTGANNHHDP +PAKP
Subjt:  MAQKILLSL-TFLLLFLGFSFLISSSAVPTTRILKSTFDHPSAQDFVFQDVGDLEMDGGDSFDLVEERLFQQGRMVLENNDYPGTGANNHHDPKSPAKP

KAG6596972.1 hypothetical protein SDJN03_10152, partial [Cucurbita argyrosperma subsp. sororia]2.6e-2772.92Show/hide
Query:  MAQKILLSLTFLLLFLGFSFLISSSAVPTTRILKSTFDHPSAQDFVFQDVGDLEMDGGDSFDLVEERLFQQGRMVLENNDYPGTGANNHHDPKSPA
        M  K LL LTFLLLFL F+FLISS+AVPTTR+L+S FD PSAQ  VFQD  DLE+ G DS + V+ERL  +GR+VLENNDYPGTGANNHHDPKSPA
Subjt:  MAQKILLSLTFLLLFLGFSFLISSSAVPTTRILKSTFDHPSAQDFVFQDVGDLEMDGGDSFDLVEERLFQQGRMVLENNDYPGTGANNHHDPKSPA

KAG7017658.1 hypothetical protein SDJN02_19524 [Cucurbita argyrosperma subsp. argyrosperma]2.2e-2672.73Show/hide
Query:  MAQKILLSL-TFLLLFLGFSFLISSSAVPTTRILKSTFDHPSAQDFVFQDVGDLEMDGGDSFDLVEERLFQQGRMVLENNDYPGTGANNHHDPKSPAKP
        M QKI LSL   LLLFLGFS L+SS AVPTTRI KSTFD PSAQDFVFQDV DLE +GGD F          GR+VLENNDYPGTGANNHHDP +PAKP
Subjt:  MAQKILLSL-TFLLLFLGFSFLISSSAVPTTRILKSTFDHPSAQDFVFQDVGDLEMDGGDSFDLVEERLFQQGRMVLENNDYPGTGANNHHDPKSPAKP

KGN59481.1 hypothetical protein Csa_001422 [Cucumis sativus]2.4e-2571.29Show/hide
Query:  MAQKILLSLTFLLLFLGFSFLISSS---AVPTTRILKSTFDHPSAQDFVFQDVGDLEMDGGDSFDLVEERLFQQGRMVLENNDYPGTGANNHHDPKSPAK
        M QKI    TF LLFL FSFL+SS+   AVPTTRILKSTFDHPS Q  V QDV D+E+  GDSF    ERLF +GR++LENNDYPGTGANNHHDPKSPAK
Subjt:  MAQKILLSLTFLLLFLGFSFLISSS---AVPTTRILKSTFDHPSAQDFVFQDVGDLEMDGGDSFDLVEERLFQQGRMVLENNDYPGTGANNHHDPKSPAK

Query:  P
        P
Subjt:  P

TrEMBL top hitse value%identityAlignment
A0A0A0LHJ0 Uncharacterized protein1.2e-2571.29Show/hide
Query:  MAQKILLSLTFLLLFLGFSFLISSS---AVPTTRILKSTFDHPSAQDFVFQDVGDLEMDGGDSFDLVEERLFQQGRMVLENNDYPGTGANNHHDPKSPAK
        M QKI    TF LLFL FSFL+SS+   AVPTTRILKSTFDHPS Q  V QDV D+E+  GDSF    ERLF +GR++LENNDYPGTGANNHHDPKSPAK
Subjt:  MAQKILLSLTFLLLFLGFSFLISSS---AVPTTRILKSTFDHPSAQDFVFQDVGDLEMDGGDSFDLVEERLFQQGRMVLENNDYPGTGANNHHDPKSPAK

Query:  P
        P
Subjt:  P

A0A5A7UDI6 Uncharacterized protein1.1e-2369.61Show/hide
Query:  MAQKILLSLTFLLLFLGFSFLISSS---AVPTTRILKSTFD-HPSAQDFVFQDVGDLEMDGGDSFDLVEERLFQQGRMVLENNDYPGTGANNHHDPKSPA
        M QKI    TF LLFL FSFL+SSS   AVPTTRILKSTF+ HPS Q  V +DV DLE+  GDSF    ERLF +GR++LENNDYPGTGANNHHDPKSPA
Subjt:  MAQKILLSLTFLLLFLGFSFLISSS---AVPTTRILKSTFD-HPSAQDFVFQDVGDLEMDGGDSFDLVEERLFQQGRMVLENNDYPGTGANNHHDPKSPA

Query:  KP
        +P
Subjt:  KP

A0A5B6ZB32 Uncharacterized protein (Fragment)1.3e-1658.43Show/hide
Query:  LTFLLLFLGFSFLISSSAVPTTRILKSTFDHPSAQDFVFQDVGDLEMDGGDSFDLVEERLFQQGRMVLENNDYPGTGANNHHDPKSPAK
        L  L+LFLGF F++SS+AVPT+R LKS    P+AQD   Q V D+  DG    +L+EER F +GRM +E+NDYPGTGANNHHDPK+P +
Subjt:  LTFLLLFLGFSFLISSSAVPTTRILKSTFDHPSAQDFVFQDVGDLEMDGGDSFDLVEERLFQQGRMVLENNDYPGTGANNHHDPKSPAK

A0A6A6KJS2 Uncharacterized protein4.5e-1758.16Show/hide
Query:  MAQKILLSLTFLLLFLGFSFLISSSAVPTTRILKSTFDHPSA-QDFVFQDVGDLEMDGGDSFDLVEERLFQQGRMVLENNDYPGTGANNHHDPKSPAK
        M  K  LS+  LLLFLGFSF++SS AVP+TR LKST ++PS+ QDF+ QD  DL +      DL E   +  GRM LEN DYPGTGANNHHDPK+P +
Subjt:  MAQKILLSLTFLLLFLGFSFLISSSAVPTTRILKSTFDHPSA-QDFVFQDVGDLEMDGGDSFDLVEERLFQQGRMVLENNDYPGTGANNHHDPKSPAK

A0A6P3YVB6 uncharacterized protein LOC1074052461.7e-1656.12Show/hide
Query:  MAQKILLSLTFLLLFLGFSFLISSSAVPTTRILKSTF-DHPSAQDFVFQDVGDLEMDGGDSFDLVEERLFQQGRMVLENNDYPGTGANNHHDPKSPAK
        M QK+LL+L  +LL LGFS  + SSA+PTTR+LKST  D  S Q  + Q    LE DG + F++ EE  F +GRMV+EN DYPGTGANNHHDP++P +
Subjt:  MAQKILLSLTFLLLFLGFSFLISSSAVPTTRILKSTF-DHPSAQDFVFQDVGDLEMDGGDSFDLVEERLFQQGRMVLENNDYPGTGANNHHDPKSPAK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCAGAAAATTCTTCTCTCCCTCACTTTCCTTCTTCTCTTTCTGGGTTTCTCCTTTCTCATTTCTTCTTCTGCAGTTCCCACTACAAGAATCCTCAAATCAACTTT
TGATCACCCATCTGCCCAAGATTTTGTTTTTCAGGATGTAGGAGATTTGGAGATGGACGGTGGAGATTCATTTGATTTGGTGGAGGAAAGATTGTTTCAACAAGGAAGGA
TGGTTTTGGAGAACAATGACTATCCTGGCACAGGGGCAAACAATCACCATGATCCAAAGTCTCCTGCAAAACCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTCAGAAAATTCTTCTCTCCCTCACTTTCCTTCTTCTCTTTCTGGGTTTCTCCTTTCTCATTTCTTCTTCTGCAGTTCCCACTACAAGAATCCTCAAATCAACTTT
TGATCACCCATCTGCCCAAGATTTTGTTTTTCAGGATGTAGGAGATTTGGAGATGGACGGTGGAGATTCATTTGATTTGGTGGAGGAAAGATTGTTTCAACAAGGAAGGA
TGGTTTTGGAGAACAATGACTATCCTGGCACAGGGGCAAACAATCACCATGATCCAAAGTCTCCTGCAAAACCTTAA
Protein sequenceShow/hide protein sequence
MAQKILLSLTFLLLFLGFSFLISSSAVPTTRILKSTFDHPSAQDFVFQDVGDLEMDGGDSFDLVEERLFQQGRMVLENNDYPGTGANNHHDPKSPAKP