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Lag0022731 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0022731
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrotransposon gag protein
Genome locationchr7:36563624..36563995
RNA-Seq ExpressionLag0022731
SyntenyLag0022731
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044978.1 retrotransposon gag protein [Cucumis melo var. makuwa]9.5e-2761.02Show/hide
Query:  MSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKTRPSTSVFDRLKVTSGQSKRKMDNLEVKLFDEVNSDKKLQSSIPSRMKRKFSVLINTEGSLKVKPNL
        +SMA  EEENQC  ST  R SAF+RLS+STSKK RPSTS FDRLK+T+ Q +R+M +L+ K F E N D K+ S +PSRMKRK SV INTEGSL VKP  
Subjt:  MSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKTRPSTSVFDRLKVTSGQSKRKMDNLEVKLFDEVNSDKKLQSSIPSRMKRKFSVLINTEGSLKVKPNL

Query:  IILTSPISQGPDQDHDES
        II T+PI++G ++  DE+
Subjt:  IILTSPISQGPDQDHDES

KAA0050734.1 gag protease polyprotein [Cucumis melo var. makuwa]2.1e-2661.02Show/hide
Query:  MSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKTRPSTSVFDRLKVTSGQSKRKMDNLEVKLFDEVNSDKKLQSSIPSRMKRKFSVLINTEGSLKVKPNL
        +SMA  EEENQC  ST  R SAF+RLS+STSKK RPSTS FDRLK+T+ Q +R+M +L+ K F E N D K+ S +PSRMKRK SV INTEGSL VKP  
Subjt:  MSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKTRPSTSVFDRLKVTSGQSKRKMDNLEVKLFDEVNSDKKLQSSIPSRMKRKFSVLINTEGSLKVKPNL

Query:  IILTSPISQGPDQDHDES
        II T+PI++G  +  DE+
Subjt:  IILTSPISQGPDQDHDES

KAA0050736.1 retrotransposon gag protein [Cucumis melo var. makuwa]1.2e-2660.17Show/hide
Query:  MSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKTRPSTSVFDRLKVTSGQSKRKMDNLEVKLFDEVNSDKKLQSSIPSRMKRKFSVLINTEGSLKVKPNL
        +SMA  EEENQC MST TR SAF+RLS+S SKK RPSTS FDRLK+T+ Q +R+M +L+ K F E N D K+ S +PSR+KRK S+ INTEGSL VKP  
Subjt:  MSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKTRPSTSVFDRLKVTSGQSKRKMDNLEVKLFDEVNSDKKLQSSIPSRMKRKFSVLINTEGSLKVKPNL

Query:  IILTSPISQGPDQDHDES
        II T+PI++G ++  DE+
Subjt:  IILTSPISQGPDQDHDES

TYK16519.1 retrotransposon gag protein [Cucumis melo var. makuwa]5.6e-2761.02Show/hide
Query:  MSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKTRPSTSVFDRLKVTSGQSKRKMDNLEVKLFDEVNSDKKLQSSIPSRMKRKFSVLINTEGSLKVKPNL
        +SMA  EEENQC  ST  R SAF+RLS+STSKK RPSTS FDRLK+T+ Q KR+M + + K F E N D K+ S +PSRMKRK SV INTEGSL VKP  
Subjt:  MSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKTRPSTSVFDRLKVTSGQSKRKMDNLEVKLFDEVNSDKKLQSSIPSRMKRKFSVLINTEGSLKVKPNL

Query:  IILTSPISQGPDQDHDES
        II T+PI++G ++  DE+
Subjt:  IILTSPISQGPDQDHDES

TYK18884.1 gag protease polyprotein [Cucumis melo var. makuwa]2.1e-2660.17Show/hide
Query:  MSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKTRPSTSVFDRLKVTSGQSKRKMDNLEVKLFDEVNSDKKLQSSIPSRMKRKFSVLINTEGSLKVKPNL
        +SMA  EEENQC  ST  R SAF+RLS+STSKK RPSTS FDRLK+T+ Q +R+M +L+ K F E N D K+ S +PSRMKRK S+ INT+GSL VKP L
Subjt:  MSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKTRPSTSVFDRLKVTSGQSKRKMDNLEVKLFDEVNSDKKLQSSIPSRMKRKFSVLINTEGSLKVKPNL

Query:  IILTSPISQGPDQDHDES
        II T+PI++G ++  DE+
Subjt:  IILTSPISQGPDQDHDES

TrEMBL top hitse value%identityAlignment
A0A5A7TQ06 Retrotransposon gag protein4.6e-2761.02Show/hide
Query:  MSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKTRPSTSVFDRLKVTSGQSKRKMDNLEVKLFDEVNSDKKLQSSIPSRMKRKFSVLINTEGSLKVKPNL
        +SMA  EEENQC  ST  R SAF+RLS+STSKK RPSTS FDRLK+T+ Q +R+M +L+ K F E N D K+ S +PSRMKRK SV INTEGSL VKP  
Subjt:  MSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKTRPSTSVFDRLKVTSGQSKRKMDNLEVKLFDEVNSDKKLQSSIPSRMKRKFSVLINTEGSLKVKPNL

Query:  IILTSPISQGPDQDHDES
        II T+PI++G ++  DE+
Subjt:  IILTSPISQGPDQDHDES

A0A5A7U974 Retrotransposon gag protein6.0e-2760.17Show/hide
Query:  MSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKTRPSTSVFDRLKVTSGQSKRKMDNLEVKLFDEVNSDKKLQSSIPSRMKRKFSVLINTEGSLKVKPNL
        +SMA  EEENQC MST TR SAF+RLS+S SKK RPSTS FDRLK+T+ Q +R+M +L+ K F E N D K+ S +PSR+KRK S+ INTEGSL VKP  
Subjt:  MSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKTRPSTSVFDRLKVTSGQSKRKMDNLEVKLFDEVNSDKKLQSSIPSRMKRKFSVLINTEGSLKVKPNL

Query:  IILTSPISQGPDQDHDES
        II T+PI++G ++  DE+
Subjt:  IILTSPISQGPDQDHDES

A0A5D3BBF9 Gag protease polyprotein1.0e-2661.02Show/hide
Query:  MSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKTRPSTSVFDRLKVTSGQSKRKMDNLEVKLFDEVNSDKKLQSSIPSRMKRKFSVLINTEGSLKVKPNL
        +SMA  EEENQC  ST  R SAF+RLS+STSKK RPSTS FDRLK+T+ Q +R+M +L+ K F E N D K+ S +PSRMKRK SV INTEGSL VKP  
Subjt:  MSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKTRPSTSVFDRLKVTSGQSKRKMDNLEVKLFDEVNSDKKLQSSIPSRMKRKFSVLINTEGSLKVKPNL

Query:  IILTSPISQGPDQDHDES
        II T+PI++G  +  DE+
Subjt:  IILTSPISQGPDQDHDES

A0A5D3D209 Retrotransposon gag protein2.7e-2761.02Show/hide
Query:  MSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKTRPSTSVFDRLKVTSGQSKRKMDNLEVKLFDEVNSDKKLQSSIPSRMKRKFSVLINTEGSLKVKPNL
        +SMA  EEENQC  ST  R SAF+RLS+STSKK RPSTS FDRLK+T+ Q KR+M + + K F E N D K+ S +PSRMKRK SV INTEGSL VKP  
Subjt:  MSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKTRPSTSVFDRLKVTSGQSKRKMDNLEVKLFDEVNSDKKLQSSIPSRMKRKFSVLINTEGSLKVKPNL

Query:  IILTSPISQGPDQDHDES
        II T+PI++G ++  DE+
Subjt:  IILTSPISQGPDQDHDES

A0A5D3D5Q0 Gag protease polyprotein1.0e-2660.17Show/hide
Query:  MSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKTRPSTSVFDRLKVTSGQSKRKMDNLEVKLFDEVNSDKKLQSSIPSRMKRKFSVLINTEGSLKVKPNL
        +SMA  EEENQC  ST  R SAF+RLS+STSKK RPSTS FDRLK+T+ Q +R+M +L+ K F E N D K+ S +PSRMKRK S+ INT+GSL VKP L
Subjt:  MSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKTRPSTSVFDRLKVTSGQSKRKMDNLEVKLFDEVNSDKKLQSSIPSRMKRKFSVLINTEGSLKVKPNL

Query:  IILTSPISQGPDQDHDES
        II T+PI++G ++  DE+
Subjt:  IILTSPISQGPDQDHDES

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTATGGCCGCGACAGAGGAAGAAAATCAATGTTCGATGTCCACCTCCACTCGACCTTCAGCTTTCCAAAGGCTAAGTGTCTCCACATCGAAGAAAACTCGACCTTC
AACATCTGTTTTTGATCGCCTCAAAGTAACAAGCGGTCAATCTAAAAGAAAGATGGATAACTTGGAGGTGAAACTTTTTGATGAAGTAAACAGCGATAAGAAGCTTCAAA
GTAGCATCCCGTCACGTATGAAGAGGAAGTTCTCTGTTCTCATAAATACAGAAGGTTCCTTGAAGGTGAAACCAAATCTCATTATCTTGACCAGTCCTATAAGTCAAGGA
CCTGATCAAGACCATGATGAATCTATCCTTTCGAAAGGATAA
mRNA sequenceShow/hide mRNA sequence
ATGAGTATGGCCGCGACAGAGGAAGAAAATCAATGTTCGATGTCCACCTCCACTCGACCTTCAGCTTTCCAAAGGCTAAGTGTCTCCACATCGAAGAAAACTCGACCTTC
AACATCTGTTTTTGATCGCCTCAAAGTAACAAGCGGTCAATCTAAAAGAAAGATGGATAACTTGGAGGTGAAACTTTTTGATGAAGTAAACAGCGATAAGAAGCTTCAAA
GTAGCATCCCGTCACGTATGAAGAGGAAGTTCTCTGTTCTCATAAATACAGAAGGTTCCTTGAAGGTGAAACCAAATCTCATTATCTTGACCAGTCCTATAAGTCAAGGA
CCTGATCAAGACCATGATGAATCTATCCTTTCGAAAGGATAA
Protein sequenceShow/hide protein sequence
MSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKTRPSTSVFDRLKVTSGQSKRKMDNLEVKLFDEVNSDKKLQSSIPSRMKRKFSVLINTEGSLKVKPNLIILTSPISQG
PDQDHDESILSKG